Concerted electron-proton transfer (CEPT) reactions avoid charged intermediates and may be energetically favorable for redox and radical-transfer reactions in natural and synthetic systems. Tryptophan (W) often partakes in radical-transfer chains in nature but has been proposed to only undergo sequential electron transfer followed by proton transfer when water is the primary proton acceptor. Nevertheless, our group has shown that oxidation of freely solvated tyrosine and W often exhibit weakly pH-dependent proton-coupled electron transfer (PCET) rate constants with moderate kinetic isotope effects (KIE ≈ 2-5), which could be associated with a CEPT mechanism. These results and conclusions have been questioned. Here, we present PCET rate constants for W derivatives with oxidized Ru- and Zn-porphyrin photosensitizers, extracted from laser flash-quench studies. Alternative quenching/photo-oxidation methods were used to avoid complications of previous studies, and both the amine and carboxylic acid groups of W were protected to make the indole the only deprotonable group. With a suitably tuned oxidant strength, we found an ET-limited reaction at pH < 4 and weakly pH-dependent rates at pH > ∼5 that are intrinsic to the PCET of the indole group with water (H2O) as the proton acceptor. The observed rate constants are up to more than 100 times higher than those measured for initial electron transfer, excluding the electron-first mechanism. Instead, the reaction can be attributed to CEPT. These conclusions are important for our view of CEPT in water and of PCET-mediated radical reactions with solvent-exposed tryptophan in natural systems.
Concerted electron-proton transfer (CEPT) reactions avoid charged intermediates and may be energetically favorable for redox and radical-transfer reactions in natural and synthetic systems. Tryptophan (W) often partakes in radical-transfer chains in nature but has been proposed to only undergo sequential electron transfer followed by proton transfer when water is the primary proton acceptor. Nevertheless, our group has shown that oxidation of freely solvated tyrosine and W often exhibit weakly pH-dependent proton-coupled electron transfer (PCET) rate constants with moderate kinetic isotope effects (KIE ≈ 2-5), which could be associated with a CEPT mechanism. These results and conclusions have been questioned. Here, we present PCET rate constants for W derivatives with oxidized Ru- and Zn-porphyrin photosensitizers, extracted from laser flash-quench studies. Alternative quenching/photo-oxidation methods were used to avoid complications of previous studies, and both the amine and carboxylic acid groups of W were protected to make the indole the only deprotonable group. With a suitably tuned oxidant strength, we found an ET-limited reaction at pH < 4 and weakly pH-dependent rates at pH > ∼5 that are intrinsic to the PCET of the indole group with water (H2O) as the proton acceptor. The observed rate constants are up to more than 100 times higher than those measured for initial electron transfer, excluding the electron-first mechanism. Instead, the reaction can be attributed to CEPT. These conclusions are important for our view of CEPT in water and of PCET-mediated radical reactions with solvent-exposed tryptophan in natural systems.
Tryptophan
(W) is one of only a handful of amino acids that can
undergo proton-coupled electron transfer (PCET). In proteins, W partakes
in PCET-mediated pathways that transfer electrons between different
redox-active amino acids up to more than 10 Å apart to reach
its destination. While electron transfer can be long-range, the coupled
protons are transferred over much shorter distances (<1 Å)
in each step to either a neighboring amino acid or water.[1−5] Nevertheless, this leads to net transport of radicals over large
distances to and from specific redox sites. There is consequently
great interest in tryptophan PCET reactions in both proteins and smaller
molecular model systems.[6−10]Figure shows
the
different PCET pathways using W as an example. PCET may occur in two
consecutive steps, shown with black and green arrows. Here, either
initial electron transfer (ET1) is followed by proton transfer
from the radical cation (PT2) or initial proton transfer
(PT1) is followed by electron transfer from the base form
(ET2). PCET may also occur in one concerted step, shown
with a diagonal pink arrow. In a stepwise reaction, the first step
often has only a small driving force or is even uphill, which tends
to make the reaction slow. In hydrophobic environments in particular,
such as the interior of many proteins, the charged intermediates are
not favored.[11] The concerted electron–proton
transfer (CEPT) reaction avoids charge buildup, and the driving force
is typically more favorable as it equals the sum of those for the
involved electron-transfer (ET) and proton-transfer (PT) steps. CEPT
reactions therefore tend to have a lower activation barrier relative
to the stepwise mechanisms. On the other hand, non-adiabatic CEPT
is limited by a lower probability of two particles tunneling, which
may result in a smaller kinetic pre-factor. The balance between these
factors can explain the competition between the sequential and concerted
reactions.[12,13] In general, a stronger oxidant
tends to favor sequential ET followed by PT (ETPT), while a stronger
proton accepting base favors PT followed by ET (PTET). When both the
oxidant and base are weak, CEPT can instead be the favored pathway.
Thus, the mechanism can be varied by changing the driving force for
PT and/or ET. The free-energy dependence of the rate constant can
also be used to determine which mechanism dominates for a given range
of conditions. A supporting piece of information when determining
the PCET mechanism is the kinetic isotope effect (KIE), where the
transferring proton is substituted for a deuteron. KIEs can be used
to gauge the effect of proton transfer on the observed rate constants.
One should note that there are many factors that may influence the
KIE; as such, it is not sufficient evidence to fully establish a particular
mechanism.[12,14]
Figure 1
Mechanisms for PCET in tryptophan (W)
with an implied external
oxidant and base. The transferred proton is marked in orange. The
radical is schematically shown to reside on the indole nitrogen; however,
electron spin resonance shows that the unpaired spin density is delocalized.[15] Black horizontal arrows represent ET, green
vertical arrows represent PT, and pink diagonal arrows represent CEPT.
Mechanisms for PCET in tryptophan (W)
with an implied external
oxidant and base. The transferred proton is marked in orange. The
radical is schematically shown to reside on the indole nitrogen; however,
electron spin resonance shows that the unpaired spin density is delocalized.[15] Black horizontal arrows represent ET, green
vertical arrows represent PT, and pink diagonal arrows represent CEPT.W often undergoes stepwise ETPT and sometimes pure
ET reactions
in proteins. This can be rationalized by its relatively low redox
potential (E°(W•+/W) ≈
+1.21 V vs NHE)[16] and low acidity of the
indole proton (Figure ) in the reduced state (pKa(W) = ∼17,
pKa(W•+) = ∼4.3).[17,18] In a protein, only the indole group of W may react via PCET since
the other functional groups make up the peptide bond. Henceforth,
the pKa of W and its analogues refers
to the indole group. Unless otherwise stated, W is assumed to be protonated
on the amine side group below pH 7.5 and deprotonated above this pH.
The carboxylic group pKa ≈ 2.5,
but this group is converted to an ester in WEE and NAWEE used in the
present study. The large pKa of W means
that sequential PTET can in many instances be ignored. When water
acts as the primary proton acceptor, CEPT reactions are less favored
than the primary ET step of ETPT; the low pKa value of protonated water (H3O+(aq), pKa ≡ 0) makes it
thermodynamically unfavorable to transfer a proton from W•+ to a small cluster of water molecules. Following this reasonable
argument,[19] it has been proposed that CEPT
from tryptophan is not likely to compete with ETPT if water (H2O) is the primary proton acceptor because of a smaller driving
force than for pure ET and a smaller probability for electron and
proton tunneling.[7,20,21] Nonetheless, both covalently linked Ru(III)polypyridine-tryptophan
(Ru(III)-W) and bimolecular systems studied by our group have directly
or indirectly demonstrated that CEPT from tryptophan with water as
the proton acceptor is viable.[6,9,22,23] In both cases, control experiments
excluded OH– and buffer species as primary proton
acceptors. It was found that ETPT dominated the reaction when E°(Ru(III/II)) ≳ E°(W•+/W). With lower oxidant potentials, the reaction followed
a CEPT mechanism. When ETPT was operative, the KIE was ≈1 and
rate constants were pH-independent. CEPT for the Ru(III)-W dyads was
characterized by distinct KIE ≈ 3.5 (at neutral pH) and rate
constants that increased weakly with pH, ca. 3-fold per pH unit.[19] This is much weaker than the 10-fold increase
expected for a stepwise reaction via the W– anion
or for a CEPT reaction with OH– or base forms of
the buffer. The theoretical origin of this pH dependence remains unclear.In a study of bimolecular PCET,[22] rate
constants were determined for two W analogues, WEE and NAW (Scheme ), using flash-quench-generated
[Ru(dmb)3]3+ (dmb = 4,4′-dimethyl, 2,2′-bipyridine)
as the external oxidant and transient spectroscopy to determine reaction
kinetics. Analogues of W have protected carboxylic and/or amine groups,
as was the case in Ru(III)-W, with the purpose of avoiding interference
from PT that is not from the indole proton. Significant KIEs of ca.
2.5 and pH-dependent rate constants were observed for WEE (Figure , black circles).
These data supported a CEPT mechanism in WEE when a weak oxidant,
[Ru(dmb)3]3+ (Table ), is used.[22] This
showed that the weakly pH-dependent rate constants and significant
KIEs were more general and not exclusive to the particular Ru(III)-W
dyad structure used in the previous studies. The assignment of a concerted
mechanism in WEE was challenged in a follow-up study by Bonin et al.[7] The alternate conclusions from these authors
are summarized in three points below:
Scheme 1
Chemical Structures of Tryptophan
and Its Three Analogues Discussed
in This Paper at pH = 7
Figure 2
Previously published second-order rate
constants for WEE oxidation
by [Ru(dmb)3]3+ as a function of pH from ref (22) (shown in black) and ref (7) (shown in gray). Flash-quench
photolysis of [Ru(dmb)3]2+ with MV2+ (circles) or [Ru(NH3)6]3+ (squares)
as the quencher was used to produce [Ru(dmb)3]3+.
Table 1
Names, Abbreviations, and Apparent
Reduction Potentials for Tryptophan, Three Analogues, and Photosensitizers
Used
name (abbreviation)
E° vs NHE (V) (W•H+/W)
E°′ vs NHE (V) at pH
5.2 (W•/W)
tryptophan (W)
1.21[16]
1.15a
n-acetyl tryptophan (NAW)
∼1.1[8]
1.0a
tryptophan ethyl ester (WEE)
1.00b
n-acetyl tryptophan ethyl ester (NAWEE)
0.908b
Calculated
from E° using pKa(W•H+) = 4.3.[17,18]
Measured using the Ag/AgCl
reference
electrode and recalculated to NHE using E°(Ag/AgCl)
= +0.205 V versus NHE.[28]
Previously published second-order rate
constants for WEE oxidation
by [Ru(dmb)3]3+ as a function of pH from ref (22) (shown in black) and ref (7) (shown in gray). Flash-quench
photolysis of [Ru(dmb)3]2+ with MV2+ (circles) or [Ru(NH3)6]3+ (squares)
as the quencher was used to produce [Ru(dmb)3]3+.Calculated
from E° using pKa(W•H+) = 4.3.[17,18]Measured using the Ag/AgCl
reference
electrode and recalculated to NHE using E°(Ag/AgCl)
= +0.205 V versus NHE.[28]Point 1. PCET rate constants for
WEE were suggested to be limited
by ET in the entire pH range studied (Figure , gray symbols), meaning that the mechanism
was either ET (at pH < 4.5) or ETPT. Since ET-limited reactions
should exhibit no pH dependence, it was suggested that the observed
pH dependence arose from changes in ΔG°ET due to the electrostatic work terms of the encounter–successor
complex. The change in electrostatics with pH was suggested to originate
from the −NH2 group on WEE which has a pKa of 7.5.[7] The pKa of the NH2/NH3+ side group shifts to 8 in D2O, which was used to explain
the previously reported KIE at neutral pH. The work terms were calculated
to give a 130 mV difference between the high and low pH and would
explain the rate constants that span 2 orders of magnitude. Note that
PT to the NH2/NH3+ side group could
be excluded by the fact that the rate was first-order in [WEE].[7]Point 2. It was suggested[7] that the
rate constants of WEE oxidation determined in ref (22) (black circles in Figure ) were not reliable
because the oxidative quencher used in the flash-quench experiments,
methyl viologen (MV2+), forms an adduct with WEE, in particular
at higher pH values. The rate constants for WEE oxidation were therefore
redetermined using [Ru(NH3)6]3+ as
the oxidative quencher (gray squares, Figure ). The disagreement in rate constants below
pH 6 when MV2+ or [Ru(NH3)6]3+ was used as the quencher was explained by uncertainties
caused by competitive charge recombination between oxidized [Ru(dmb)3]3+ and the reduced quencher. At lower pH values,
WEE oxidation rates are slower, resulting in observed kinetics that
are increasingly dominated by the competitive recombination reaction.Point 3. The oxidation of NAWEE was investigated in ref (7). In NAWEE, both the carboxylic
acid and amine groups are protected, leaving the indole proton as
the only titratable group on the molecule (Scheme ). From kinetic data, the rate constants
of NAWEE oxidation by [Ru(dmb)3]3+ were found
to be pH-independent. From electrochemical data, two irreversible
cyclic voltammograms were used to compare NAWEE and WEE oxidation.
NAWEE was proposed to be “less oxidizable” than WEE
by ∼50 mV. The 3-fold slower reaction for NAWEE than WEE at
high pH was taken as consistent with an ET-limited ETPT reaction for
both compounds. It was thus concluded that the observed pH dependence
of the rate constant for WEE was only due to titration of the NH2/NH3+ side group (pKa ∼ 7.5).In this report, we re-evaluate
PCET in WEE and NAWEE. We show how
titration of the NH2/NH3+ side group
cannot explain the pH-dependent rate constant for WEE using (i) analyses
of data pertaining to electrostatic effects, where we show that the
explanation of the pH-dependent rate constant in ref (7) is based on an incorrect
evaluation of work terms; (ii) voltammetry to determine the apparent
W•/W potentials of WEE and NAWEE, which show that
NAWEE is oxidized at a lower potential than WEE, opposite to what
was stated in ref (7); (iii) determination of
rate constants for WEE oxidation by [Ru(dmb)3]3+ as a function of pH; and (iv) determination
of rate constants for NAWEE oxidation by a weaker oxidant (zinc(II)tetra(4-sulphonatophenyl)porphyrin,
[ZnTPPS]4–) as a function of pH. In flash-quench
experiments, we remove any kinetic uncertainties due to competitive
recombination by using an irreversible oxidative quencher. The new
data clearly demonstrate that the PCET reaction is not limited by
ET over the entire pH range for both WEE and NAWEE when appropriate
oxidants are used. PCET kinetics for NAWEE, with both side groups
protected, show a pH dependence of of the PCET rate constants that
is parallel to that for WEE, provided that the oxidant strength is
decreased to allow for a CEPT mechanism to compete. Our results show
a general behavior of tryptophan PCET reaction in aqueous solution,
which contrasts with previous theoretical predictions, and we discuss
the implications thereof.
Results and Discussion
In this report, we re-examine the PCET reactivity of the tryptophan
derivatives WEE and NAWEE in aqueous environments. In Section , we describe the electrostatic
work-term calculation which was incorrectly applied in ref (7). Section describes voltammetry experiments to determine
the apparent W•/W potentials for WEE and NAWEE to
establish how protecting the amine group affects the indole reduction
potential. Section focuses on rate constants for WEE oxidation at pH 2.0–11.4
by transient absorption spectroscopy with laser flash-quench photolysis
to generate the oxidant in situ. The use of an irreversible quencher
or direct two-photon ionization without a quencher simplified analyses
of the observed kinetics by avoiding potential effects from complexation
with MV2+ or the instability of [Ru(NH3)6]3+ at pH ≥ 8. In Section , we report pH-dependent rate constants
for NAWEE oxidation using a weak oxidant between pH 6.3 and 9.5.
Electrostatics of the Encounter/Successor
Complex Cannot Explain pH-dependent Rate Constants for WEE
Here, we consider the pH-dependent oxidation of WEE by an external
diffusing oxidant, [Ru(dmb)3]3+. Bonin et al.[7] argued that the pH dependence of WEE oxidation
arose from changes in the electrostatic interactions between reactants
and products as the −NH2/–NH3+ equilibrium (pKa = 7.5) shifted
with pH (Point 1, Introduction). Specifically,
the Coulombic work needed to bring the ET reactants and products to
the reaction distance in solution is not the same for the −NH2 and −NH3+ forms. For simplicity
of notation, we use WEE throughout the present paper to indicate both
these protonation forms and use the charge in WEE•+ to specifically indicate the protonated indole radical.The
Coulombic work is defined as w = z1z2e2/4πε0εSd, where z1 and z2 are the ion charge numbers, e is the elementary
charge, ε0 is the electric constant (permittivity),
εS is the solvent static dielectric constant, and d is the distance between ions. The Coulombic work for reactant
and product states contributes to ΔG°ET in the encounter complex such that[24]where wR and wP are the Coulombic work terms associated with
the reactants and products, respectively. The work terms for acid
and base forms of WEE (wA and wB, respectively) will be not be the same, and
a shift in ΔG°ET can be expected.It was concluded in ref (7) that WEE oxidation by [Ru(dmb)3]3+ occurred by ET-limited ETPT over the entire pH range examined. The
pH-dependent rate constants reported in ref (7) (Figure , gray squares) were fit to a model of titration
of the −NH2/–NH3+ group
of WEE. In this model, the driving force was assumed to be more favorable
for the base form due to the difference between work terms in the
acid (−NH3+) and base (−NH2) forms of WEE. That is, ΔG° for
ET was calculated to be 130 meV more negative for the base form of
WEE. With this value, the model in ref (7) could fit the pH-dependent data, giving a 100-fold
higher ET rate constant for the base form.The work terms were
incorrectly calculated in ref (7), which led to an erroneous
conclusion. The work term effect on ΔG°ET was calculated by taking the sum of the reactant and product
work terms; for a correct thermodynamic cycle, it must be the difference
between reactant and product work terms.[24] We rectify this calculation below and show that this gives instead
an opposite and quite small effect on ΔG°ET.At pH < 7.5, the reactants in the bimolecular
encounter–successor
complex for ET are [Ru(dmb)3]3+ and the monocationic
WEE, where WEE is protonated at the amine. The products are [Ru(dmb)3]2+ and the dicationic radical (NH3+-WEE•+), where both the indole radical and
amine groups remain protonated. The work terms are given by eq . At pH > 7.5, the reactants
are [Ru(dmb)3]3+ and the charge-neutral WEE;
upon ET, the products are [Ru(dmb)3]2+ and WEE•+, where the latter is only protonated at the indole
radical and the work terms are described by eqIn eqs and 2b, w0 = e02/4πε0εSd. Using w0 = +26 meV as estimated by
Bonin et al.,[7] the work term contributions
to ΔG°ET should be +26 and
+52 meV for the acid and base
forms, respectively. Bonin et al. incorrectly calculated the acid
work term to be 7w0 = +180 meV, which
led to an overestimation between the differences in ET driving force
between acid and base forms of WEE. The work terms are instead very
small, and the base form actually shows the more positive ΔG°, contrary to what was reported previously. Consequently,
the pH-dependent data in Figure , with a rate constant that increases with pH, cannot
be explained by an ET-limited reaction with a driving force that is
electrostatically modulated by the protonation of the amine group.The change in electrostatics with pH due to the protonation equilibrium
of the ammonium group on WEE may still influence the diffusional encounter
rate of the reacting species. To determine how much this might affect
the rate constants, we measured transient absorption (vide infra)
with 200 mM KCl added to the solution at three different pH values.
The results are seen in Figure S5 and show
rate constants that are identical to those for samples without KCl,
within experimental uncertainty. If electrostatic effects on the diffusional
encounter between WEE and [Ru(dmb)3]3+ had been
important, we would have expected to see a significant screening effect
by 200 mM KCl. Electrostatic differences between the −NH2/–NH3+ forms of WEE are therefore
not the origin of the changes in rate constant, which is 2 orders
of magnitude higher at pH > 8 than at pH < 4. It means that
it
is difficult to explain the data in Figure with an ET-limited oxidation of WEE in the
entire pH range, as was proposed in ref (7).
Apparent W•/W Reduction
Potentials Show that NAWEE is Easier to Oxidize than WEE
The model of ET-limited ETPT in WEE proposed by Bonin et al.[7] was further supported by comparing the pH dependence
of PCET rate constants in a related tryptophan analogue, NAWEE, Scheme . When the same [Ru(dmb)3]3+ oxidant was used, NAWEE exhibited pH-independent
oxidation rate constants, which was interpreted as an ET-limited process
in ref (7). By comparing
two ill-defined cyclic voltammograms at pH 10, it was proposed that
NAWEE was more difficult to oxidize than WEE. If NAWEE is more difficult
to oxidize and still exhibits rate constants consistent with an ET-limited
ETPT process, then one can assume that WEE oxidation must also be
ET-limited ETPT as ETPT should be disfavored relative to CEPT when
the driving force for ET is decreased.[12] That is, if the reduction potential for NAWEE is higher than that
for WEE, the reaction mechanism should not change due to differences
in ET driving force between WEE and NAWEE.Functionalizing the
amine group on W to form NAW has previously been shown to shift the
reduction potential by 100 mV to lower values, see Table .[8] The shifts in reduction potentials between WEE and NAWEE reported
by Bonin et al. were opposite to what was observed for W and NAW;
this counter-intuitive observation led us to reinvestigate the apparent
reduction potentials for WEE and NAWEE.We observed similarly
ill-defined voltammograms at high pH to those
previously reported;[7] however, at pH 5.2,
we obtained well-defined anodic peaks. Using cyclic voltammetry, peak
potentials were determined as a function of scan rate for WEE and
NAWEE at pH 5.2 in 0.1 M KNO3 and 0.5 mM KPi. From the intercept of peak potentials versus scan rate (slope ∼20
mV per decade), the apparent W•/W potentials for
the two compounds were determined (Table , details on page S3 in the Supporting Information). Our data show that when the amine
group is protected, the potential shifts by ∼100 mV to lower
values for NAWEE compared to WEE. This is the opposite trend to what
was concluded previously;[7] therefore, the
pH independence of NAWEE cannot be used to disprove a CEPT mechanism
for WEE. The difference in pH dependence could instead be due to different
PCET mechanisms, and we show below that this is most likely the case.We note that deprotonation of the −NH3+ group does not give a detectable kink in the Nernstian slope of
Pourbaix diagrams for W;[25] therefore, changes
in E° cannot explain the 100-fold larger rate
constant for the base form of WEE in the framework of an ET-limited
mechanism.
Oxidation of W Analogues
by Flash Photolysis
Figure summarizes
the second-order rate constant of WEE oxidation by [Ru(dmb)3]3+ from two different studies. The rates of WEE oxidation
change with pH and show some discrepancies at high- and low-pH regions
depending on the oxidative quencher used.[7] In this study, we carefully reinvestigated the pH dependence of
WEE oxidation using two different methods to obtain laser-flash-generated
[Ru(dmb)3]3+. The rate constants of WEE oxidation
were determined by following the oxidation reaction using optical
transient absorption (TA) spectroscopy.The photoinitiated reactions
involved in W-analogue oxidation are shown in Figure for three different oxidative quenching
scenarios: reversible quenching, irreversible quenching, and sequential
two-photon ionization without a quencher. In all three scenarios,
step 1 is the excitation of the photosensitizer (PS) by a laser flash,
step 2 involves oxidative quenching of the excited photosensitizer
to produce PS+, and step 3 is the oxidation of the W analogue
by PS+. Below, we discuss each of these approaches for
resolving the rates of W-analogue oxidation.
Figure 3
Generation of W• by flash-quench photolysis using
a reversible quencher (left), an irreversible quencher (middle), or
two-photon ionization (right); (1) represents laser excitation of
the photosensitizer (PS = [Ru(dmb]3]2+ or [ZnTPPS]4–), which is followed by oxidative quenching by an
irreversible quencher (2), a reversible quencher (2′), or ionization
(2†). Recovery of the photosensitizer to the ground
state (3) either via reaction with a W analogue or via a combination
of reaction with W and recombining with the electron lost in the oxidation
process.
Generation of W• by flash-quench photolysis using
a reversible quencher (left), an irreversible quencher (middle), or
two-photon ionization (right); (1) represents laser excitation of
the photosensitizer (PS = [Ru(dmb]3]2+ or [ZnTPPS]4–), which is followed by oxidative quenching by an
irreversible quencher (2), a reversible quencher (2′), or ionization
(2†). Recovery of the photosensitizer to the ground
state (3) either via reaction with a W analogue or via a combination
of reaction with W and recombining with the electron lost in the oxidation
process.Reversible quenchers, methyl viologen
(MV2+) or [Ru(NH3)6]3+, were utilized in the acquisition
of data shown in Figure .[7,22] Under reversible quenching conditions, the reduced
quencher (MV•+ or [Ru(NH3)6]2+) can undergo charge recombination with the oxidized
photosensitizer (step 3′, Figure ). When rates of W-analogue oxidation are
slow, for example, at low pH, the charge recombination reaction will
compete for oxidizing equivalents from PS+, effectively
reducing the yield of the oxidized W analogue. As the rate of charge
recombination approaches the rate of W-analogue oxidation, the observed
kinetics will increasingly reflect the rates of recombination. This
effect gives a greater uncertainty in the determination observed W-analogue
oxidation rates. The disagreement in WEE oxidation rate constants
at low pH in Figure could be explained by such uncertainties.MV2+ and
[Ru(NH3)6]3+ exhibit limitations
for use as quenchers in these studies. It was
suggested that MV2+ forms an adduct with WEE at high concentrations
(25 mM of each species) and high pH (∼10 and above).[7] This suggestion was supported by the appearance
of a new optical absorption at 400 nm at high concentrations of MV2+. The tendency to form a MV2+-WEE adduct was not
investigated under the conditions of the kinetic experiments, specifically
with lower MV2+ concentrations, and it was not possible
to quantify what, if any, influence this had on the WEE oxidation.[7] To avoid potential complications with an adduct
at higher pH, [Ru(NH3)6]3+ was used
as the reversible electron acceptor in ref (7). Use of [Ru(NH3)6]3+ as a quencher is limited by its instability at high pH.[7,29] We could confirm that at pH > 8, aqueous solutions of [Ru(NH3)6]3+ rapidly turn black, showing loss
of molecular integrity. The oxidative quenching reaction between *[Ru(dmb)3]2+ and [Ru(NH3)6]3+ at high pH is not well defined; this uncertainty could lead to errors
in the determination of oxidation rate constants from kinetic fits.In this investigation, we avoid the limitations described above
by using an irreversible electron acceptor, [Co(NH3)5Cl]Cl2, over a pH range of 2–7.5. Use of
an irreversible quencher eliminates the kinetic complications from
charge recombination and is particularly useful at the lower pH values
where the WEE oxidation rates are expected to be slow. Upon reduction
step 2 (Figure ),
[Co(NH3)5Cl]Cl2 decomposes to Co2+ (aq), NH4+ (aq), and Cl– (aq), which leads to a slight increase in pH of the solution with
each laser flash (roughly 0.5 pH units per 5–10 laser flashes).
Each TA experiment was composed of 4–8 laser flashes. The change
in pH was monitored before the first flash and after the last flash;
the reported pH is the average of these two measurements. [Co(NH3)5Cl]Cl2 could not be used throughout
the entire pH range because it is a relatively slow quencher (pseudo-first-order
rate constant of quenching kq ≈
3.6 × 106 s–1 for reaction with
*[Ru(dmb)3]2+), and its solubility is also pH-dependent
and limited to ∼10 mM (with higher solubility at high pH).[30] At high pH values, this results in a quenching
reaction that occurs on a similar timescale to WEE oxidation, meaning
that the latter will not be resolved and observed.At pH >
7.5, the photosensitizer [Ru(dmb)3]2+ was instead
oxidized in the absence of a quencher via sequential
two-photon excitation at 355 nm (Figure ).[31−34] During the photoionization, freely solvated electrons
are formed within the duration of the 10 ns laser pulse. The solvated
electrons exhibit broad absorption with a peak centered around 700
nm and a lifetime of ∼0.1 ms before they recombine with [Ru(dmb)3]2+ or [Ru(dmb)3]3+.Recovery of the [Ru(dmb)3]2+ ground state
after each laser shot was complete and occurred on a time scale of
∼100 μs in all experiments at pH > 7.5 (Supporting Information page S11). The oxidized
sensitizer
in the absence of WEE is stable on much longer time scales than that,
even in alkaline water. The stronger oxidant [Ru(bpy)3]3+ (ruthenium(II)-2,2′-bipyridine) has been reported
to decay by reactions with OH– with a rate constant
of k = 148 M–1 s–1 at pH > 11.[35] This would correspond
to
a Ru(III) lifetime on the order of 1 s at pH = 11.4, which is clearly
much slower than what is observed here in the two-photon ionization
experiments.For this study, all TA experiments were carried
out in 0.5 mM KPi buffer. This concentration has been shown
to be small enough
such that water, and not the buffer, acts as the primary proton acceptor.[22] Unless otherwise specified, the kinetic traces
of [Ru(dmb)3]2+ (ground state) recovery were
fit to a single exponential for the model of a pseudo-first-order
reaction with excess WEE or NAWEE (vide infra). The second-order rate
constants were determined by dividing the pseudo-first-order rate
constants obtained from kinetic fits by the W-analogue concentration
present in the experiment.
WEE Oxidation is Coupled
to Proton Transfer
The rate constants for WEE oxidation were
obtained as a function
of pH from pH 2.0 to 11.4 using [Ru(dmb)3]2+ as the photosensitizer. At pH < 7.5, [Ru(dmb)3]2+ was excited at 460 nm in the presence of the [Co(NH3)5Cl]Cl2 quencher, while at pH >
7.5,
[Ru(dmb)3]2+ was excited by 355 nm laser light,
resulting in two-photon ionization. Kinetic data were obtained from
transient absorption measurements at different wavelengths, Figure . Monitoring the
reaction at 450 nm allowed us to follow the bleach and recovery of
the [Ru(dmb)3]2+ ground state. Recovery of the
signal at 450 nm back to the baseline can be unambiguously assigned
to the oxidation of WEE (step 3, Figure ); in the absence of WEE, the signal at 450
does not recover, indicating that no competitive recombination reactions
occur on experimental timescales. The formation of the neutral radical,
WEE•, was indicated by the appearance of a positive
signal at 510 nm[6,9] with comparable kinetics to the
recovery of the 450 nm signal. Protonated tryptophan radicals, W•+, exhibit an absorption maximum at 560 nm. At low
pH (≤3), a strong signal at 560 nm indicated the formation
of WEE•+, vide infra. At higher pH values (≥5),
a very weak positive signal at 560 nm was observed in kinetic traces
for WEE oxidation, Figure . Based on the small amplitude of the 560 nm signal, however,
it can be attributed to the shoulder of the neutral radical absorption
peak.[6,9] These data show that the oxidation reaction
pH ≥ 5 involves the loss of both an electron and a proton from
WEE, confirming that WEE oxidation proceeds by PCET. This is expected
as pKa(W•+) is ∼4.3
(see above).
Figure 4
TA kinetic traces (symbols) and single-exponential fits
(solid
lines) after laser pulse excitation at 460 nm of a solution of 20
μM [Ru(dmb)3]2+, 5 mM WEE, and 4 mM [Co(NH3)5Cl]2+ obtained in pH 6.0 (±0.1)
0.5 mM KPi at 510 nm (pink circles; magenta line), 560
nm (light-green crosses; dark-green line), and 450 nm (dark-green
circles; white line). Black dots indicate the control experiment obtained
at 450 nm without WEE and normalized to the 450 nm bleach.
TA kinetic traces (symbols) and single-exponential fits
(solid
lines) after laser pulse excitation at 460 nm of a solution of 20
μM [Ru(dmb)3]2+, 5 mM WEE, and 4 mM [Co(NH3)5Cl]2+ obtained in pH 6.0 (±0.1)
0.5 mM KPi at 510 nm (pink circles; magenta line), 560
nm (light-green crosses; dark-green line), and 450 nm (dark-green
circles; white line). Black dots indicate the control experiment obtained
at 450 nm without WEE and normalized to the 450 nm bleach.The PCET rate constants determined for WEE as a function
of pH
in the present study are shown in Figure as filled triangles and diamonds. Previously
reported data are shown as open squares and circles.[7,18] The filled data are discussed in detail below. Single-shot kinetic
traces with fits and residuals for each data point are found in the Supporting Information.
Figure 5
Experimental PCET rate
constants for WEE oxidation by [Ru(dmb)3]3+ as
a function of pH. Filled pink triangles
represent data collected using [Co(NH3)5Cl]2+ as a quencher. Filled orange diamonds represent data with
two-photon ionization without acceptors. Data in gray from ref (7), black data from ref (22), are reproduced from Figure . Circles represent
data collected using MV2+ as quencher. Squares represent
data collected using [Ru(NH3)6]3+ as a quencher. The dashed vertical lines mark pH regions defined
in the text.
Experimental PCET rate
constants for WEE oxidation by [Ru(dmb)3]3+ as
a function of pH. Filled pink triangles
represent data collected using [Co(NH3)5Cl]2+ as a quencher. Filled orange diamonds represent data with
two-photon ionization without acceptors. Data in gray from ref (7), black data from ref (22), are reproduced from Figure . Circles represent
data collected using MV2+ as quencher. Squares represent
data collected using [Ru(NH3)6]3+ as a quencher. The dashed vertical lines mark pH regions defined
in the text.
pH-dependent Rate Constants
for WEE Cannot
be Explained by an ET-Limited Reaction
New data from the
present study are discussed along with the previously published results[7,22] in the following pH regions: pH < 4, pH 5–8, and pH >
8.At pH < 4. pH below the pKa of oxidized WEE (pKa = ∼4.3 for
W•+/W•), no deprotonation of the
oxidized WEE radical is expected. From the data in Table , one may assume that ΔG°ET > 0, but WEE is in great excess
of
[Ru(dmb)3]3+, which can drive the reaction.
Kinetic traces in this pH region show a larger positive signal at
560 versus 510 nm, indicating the formation the protonated radical,
WEE•+, Figure S7. The
kinetic traces at 450 nm probed the recovery of the [Ru(dmb)3]2+ ground-state bleach. With a high concentration of
WEE (80 mM), these were single-exponential, indicating a pseudo-first-order
reaction, with a rate constant that agreed well with previously published
results[7] (Figure ). At lower concentrations of WEE, the kinetics
were not single-exponential; instead, the data are consistent with
an uphill pre-equilibrium ET (ΔG°ET > 0), followed by further reactions of the radical cation
(e.g., dimerization); see Supporting Information, page S5, for further details. Thus, while the observed rate constant
is the sum of those for ET and its reverse, the concentration of WEE
at 80 mM is sufficiently large that the forward rate constant dominates
and that this gives a sufficiently precise determination of kET.5 < pH < 8. In this region,
all previously published data
exhibit rate constants that change as a function of pH with a slope
< 1, seen in Figure . Between pH ∼ 5 and 6, previous data do not agree well depending
on which quencher, MV2+ or [Ru(NH3)6]3+, was used, where PCET rate constants obtained with
MV2+ as the quencher exhibited a weaker slope. The present
data at pH 5–8 agree best with PCET rate constants determined
with [Ru(NH3)6]3+ as the quencher
and have a slope of ∼0.7 (a fit is shown in Figure , vide infra).
Figure 8
(A) TA kinetic traces
recorded at pH = 6.3–8.8 on samples
containing 0.39–0.42 mM NAWEE, 20–21 μM [ZnTPPS]4–, and 0.4–0.5 mM [Co(NH3)5Cl]2+. The inset shows the same traces on a longer timescale;
the asterisk (*) denotes a probe lamp artifact. (B) Experimental second-order
PCET rate constants for NAWEE oxidation by [ZnTPPS]3– (green dots). The dashed black line represents a linear fit corresponding
to f(x) = 0.69x–0.39. Also shown are PCET rate constants for WEE obtained
using [Ru(dmb)3]2+ as the photosensitizer and
[Co(NH3)5Cl]2+ as the quencher (pink
triangles), reproduced from Figure . A fit to f(x) =
0.68x + 2.5 is shown as a solid black line.
pH >
8. In this pH region, the previously published WEE oxidation
rate constants are not in agreement. Specifically, data from ref (22) with MV2+ as
the quencher appear to increase with increasing pH, while data from
ref (7) appear to level
out after pH ∼ 8 with both MV2+ and [Ru(NH3)6]3+ as quenchers, but at different rate constant
values. For the present data, we wanted to avoid using MV2+ and [Ru(NH3)6]3+ quenchers because
of their respective reported issues at high pH values (vide supra).
[Co(NH3)5Cl]2+ could not be used
due to its relatively slow quenching rate constant. The [Ru(dmb)3]3+ species was therefore instead generated via
direct two-photon-induced electron transfer to water (photoionization)
without the use of any quenchers. The photoionization occurs when
[Ru(dmb)3]2+ sequentially absorbs two photons
at 355 nm during the same ∼10 ns laser pulse (step 1 and 1† in Figure , right side).[31−34] The solvated electrons formed have a broad absorption signal that
overlaps with the WEE• at 510 nm. At 510 nm, a large
positive signal is seen, followed by a decay as the electrons recombine
with either [Ru(dmb)3]2+ or [Ru(dmb)3]3+. A WEE concentration of 0.1 mM was used in the pH
region studied. At concentrations greater than 0.1 mM, mixed kinetics
between [Ru(dmb)3]3+ formation and WEE oxidation
were observed. At 0.1 mM WEE, there was a small component of competitive
recombination between e–solv and [Ru(dmb)3]3+. The kinetic contribution of WEE oxidation
was extracted by the following procedure: the signal observed at 510
nm where the solvated electrons absorb was fitted to a single exponential
and was then subtracted from the single-exponential fit at 450 nm
which follows the recovery of the [Ru(dmb)3]2+ species. Further details can be found in Supporting Information page S11. The rate constants of WEE oxidation are
reported in Figure as orange filled diamonds. The rate constants of WEE oxidation by
the two-photon ionization method do not level off with increasing
pH and agree well with those determined in ref (22). This shows that the pH
dependence of the rate constant for WEE oxidation cannot be explained
by a simple titration of the amine group since the rate constants
continue to increase at pH values well beyond the amine pKa at ∼7.5. It also shows that WEE oxidation cannot
occur by ETPT in the entire pH range as the observed rate constant
for stepwise ETPT cannot exceed that for the initial ET step, which
was measured at pH < 4 (k = 1 × 106 M–1 s–1).To further exclude
any effects of side group titration, we examined
the oxidation of NAWEE, where both side groups are protected.
NAWEE Exhibits pH-dependent Rate Constants
with a Weaker Oxidant
When NAWEE oxidation was studied with
[Ru(dmb)3]3+ as the photogenerated oxidant under
reversible quenching conditions, pH-independent oxidation rate constants
were observed.[7] For this study, we redetermined
the rate constants of NAWEE oxidation using the same oxidant, [Ru(dmb)3]3+, and [Co(NH3)5Cl]2+ as a sacrificial quencher and could confirm this result,
Figure S16, Supporting Information. The
pH independence of oxidation rate constants is consistent with the
lower reduction potential for NAWEE in comparison to WEE, Table . The lower reduction
potential for NAWEE favors an electron-transfer-limited ETPT mechanism
when [Ru(dmb)3]3+ is used (Point 3, Introduction). The use of a weaker oxidant would
open the possibility for NAWEE oxidation that proceeds by a CEPT mechanism.[12] To test this hypothesis, we used a weaker oxidant,
[ZnTPPS]3–, where E°([ZnTPPS]4–/3–) = +0.87 V versus NHE (Table ), as a photogenerated oxidant.Using the same laser flash-quench method as above, [ZnTPPS]4– was excited in the Q-band at 545 nm[35] and its triplet state was oxidatively quenched by [Co(NH3)5Cl]2+ on the timescale of ∼200
ns (Figure S18). The transient absorption
spectrum shows a peak at 450 nm from the resulting [ZnTPPS]3– radical.[36] In absence of NAWEE, the radical
is stable up to at least several seconds (Figure S18). In the presence of NAWEE, this absorption peak disappears
on the ms timescale; Figure shows data at pH = 7.8, where the [ZnTPPS]3– absorption seen after 1 ms is gone after 30 ms. The corresponding
kinetic trace at 450 nm (Figure ) shows a single-exponential decay with a time constant
of 17 ms at 0.42 mM NAWEE (pseudo-first-order conditions). A peak
at ca. 510 nm from the resulting NAWEE• radical
was not observed. This is not unexpected since tryptophan radicals
are known to undergo rapid dimerization in solution.[10] A sufficiently rapid rate of dimerization would lead to
amounts of NAWEE• so small that they are undetectable.
Instead, we see a remaining, indistinct positive absorption that decreases
slightly at >450 nm on a 100 ms time scale but is thereafter quite
stable. Indeed, a steady-state absorption spectrum of the solution
taken after laser exposure shows significant buildup of a photoproduct
of the oxidized porphyrin already after a single flash (Figure S17). For this reason, all data used for
kinetic analysis were obtained with fresh samples for each laser flash,
carefully avoiding light exposure prior to the experiment. The slower
spectral evolution conveniently showed an isosbestic point at the
[ZnTPPS]3– maximum at 450 nm, resulting in single-exponential
traces representing the PCET reaction. The kinetic traces at 470 nm
instead were fitted with a biexponential function where the fast component
had the same lifetime as that at 450 nm, and the slow component, with
a comparatively small amplitude, had a lifetime of 103 ms at pH =
7.8. This shows that the PCET reaction and the much slower porphyrin
degradation are kinetically well separated, and the latter should
not interfere with analyses of the former.
Figure 6
Transient spectra of
20 μM [ZnTPPS]4– after
laser pulse excitation at 545 nm in the presence of 0.53 mM [Co(NH3)Cl]2+ and 0.42 mM NAWEE in 0.5 mM KPi buffer at pH = 7.8. Spectra were constructed from single-wavelength
traces with a fresh sample for each laser shot.
Figure 7
TA kinetic
traces after laser pulse excitation at 545 nm 20 μM
[ZnTPPS]4–, 0.42 mM NAWEE, and 0.53 mM [Co(NH3)5Cl]2+ collected at pH = 7.8 ±
0.2 in 0.5 mM KPi at 450 nm (upper trace, green data with
a dark single-exponential fit) and 470 nm (lower trace, pink data
with a magenta double-exponential fit). Gray dots are control experiments
collected at 450 and 470 nm without NAWEE.
Transient spectra of
20 μM [ZnTPPS]4– after
laser pulse excitation at 545 nm in the presence of 0.53 mM [Co(NH3)Cl]2+ and 0.42 mM NAWEE in 0.5 mM KPi buffer at pH = 7.8. Spectra were constructed from single-wavelength
traces with a fresh sample for each laser shot.TA kinetic
traces after laser pulse excitation at 545 nm 20 μM
[ZnTPPS]4–, 0.42 mM NAWEE, and 0.53 mM [Co(NH3)5Cl]2+ collected at pH = 7.8 ±
0.2 in 0.5 mM KPi at 450 nm (upper trace, green data with
a dark single-exponential fit) and 470 nm (lower trace, pink data
with a magenta double-exponential fit). Gray dots are control experiments
collected at 450 and 470 nm without NAWEE.The rate constants for NAWEE oxidation were thus obtained from
biexponential fits to traces collected at 470 nm, Figure A. Figure B summarizes these second-order rate constants (k2) as a function of pH (green dots). For comparison, the
rate constants for WEE oxidation by [Ru(dmb)3]3+ as a function of pH are shown (pink triangles). The oxidation of
both NAWEE and WEE shows a linear dependence of log k2 on pH with a slope of 0.7. This shows that a similar
pH dependence to that observed for WEE can be obtained even in the
absence of a protonatable amine group. The mechanistic implications
of these results are discussed in the next section.(A) TA kinetic traces
recorded at pH = 6.3–8.8 on samples
containing 0.39–0.42 mM NAWEE, 20–21 μM [ZnTPPS]4–, and 0.4–0.5 mM [Co(NH3)5Cl]2+. The inset shows the same traces on a longer timescale;
the asterisk (*) denotes a probe lamp artifact. (B) Experimental second-order
PCET rate constants for NAWEE oxidation by [ZnTPPS]3– (green dots). The dashed black line represents a linear fit corresponding
to f(x) = 0.69x–0.39. Also shown are PCET rate constants for WEE obtained
using [Ru(dmb)3]2+ as the photosensitizer and
[Co(NH3)5Cl]2+ as the quencher (pink
triangles), reproduced from Figure . A fit to f(x) =
0.68x + 2.5 is shown as a solid black line.
General Discussion
CEPT as a Mechanism for WEE and NAWEE Oxidation
The
pH dependence observed for NAWEE and [ZnTPPS]3– is
the same as for the reactions of [Ru(dmb)3]3+ and WEE, which we have been assigned to a CEPT reaction.[22] Our results exclude the stepwise reactions.
PTET would have given a slope = 1 in Figure B, and because of the large pKa value of W (∼17), the fraction of W– would be too small to produce the observed rate constants. For example,
at pH = 7, the fraction is only [W–]/[W] ≈
10–10. For a pre-equilibrium PTET reaction via the
W– fraction, only 10–10 of the
encounters will lead to reaction, which with a diffusion-controlled
encounter (∼1010 M–1 s–1) would give a rate constant as small as kPTET ∼ 1 M–1 s–1. This is
7 and 4 orders of magnitude lower than the observed values for WEE
and NAWEE, respectively. PT-limited PTET in the encounter complex
would also be too slow to account for the observed rate constants
(see the Supporting Information, page S28).
An ETPT mechanism, on the other hand, can be excluded because the
observed rate constant cannot be larger than that for the forward
ET step which for WEE was measured at low pH (1 × 106 M–1 s–1). Also for NAWEE with
[Zn(TPPS)]3–, an ETPT would have been slower than
what is observed; the oxidant is much weaker than [Ru(dmb)3]3+, but the observed rate constant at high pH nevertheless
reaches a value similar to that for ET in WEE. This would leave CEPT
as the plausible mechanism for the observed reactions at pH > 5
for
both WEE with [Ru(dmb)3]3+ and NAWEE with [ZnTPPS]3–. The very similar pH dependence of the two systems
suggests that they follow the same mechanism. At pH < 4, the observed
reaction for WEE is single ET with a comparatively slow rate (Figure ).
Water as the Primary Proton Acceptor for
CEPT
The kinetic data indicate that WEE and NAWEE oxidation
proceeds by CEPT. The TA data show that the electron is transferred
from WEE or NAWEE to the oxidized photosensitizer. For WEE, the formation
of WEE• was directly observed to be concomitant
with the recovery of the [Ru(dmb)3]2+ signal
(cf. Figure ). The
initial proton-transfer step involves a buffer, water, or OH–. The rate constants for PCET in WEE and NAWEE were determined in
buffers of a sufficiently low phosphate concentration (0.5 mM) such
that it did not act as the primary proton acceptor. This can be clearly
seen from control experiments with varying concentrations of the buffer,
which for WEE and [Ru(dmb)3]3+ were published
in ref (22). Table S8 gives rate constants for NAWEE oxidation
by [ZnTPPS]3– at pH ∼ 7.9 for buffer concentrations
ranging from 0.5 to 5 mM KPi. No significant trend in rate
constant with buffer concentration was observed, and it can be concluded
that at 0.5 mM, KPi plays a minimal role as the primary
proton acceptor. This leaves water or OH– as the
possible primary proton acceptor under the conditions examined.To determine to what extent OH– may act as the
proton acceptor in a CEPT reaction, we estimated the upper limit for
that rate constant by assuming that CEPT in the oxidant/W-analogue
encounter complex is controlled by its diffusional encounter with
OH– (kdiff ∼
1010 M–1 s–1 in water).
The formation of the encounter complex was assumed to be thermoneutral
(association constant K ∼ 1; see Supporting Information page S27 for the full
derivation). From this estimate, we found that with WEE at pH <
12, the [OH–] is too small to agree with the observed
rate constants. For NAWEE, with slower oxidation rates, [OH–] is too small at pH < 10. With these estimates, PCET with OH– as a primary proton acceptor cannot explain the pH-dependent
rate constants observed. Furthermore, if OH– acted
as the primary proton acceptor, the observed rate constant should
increase by a factor of 10 per pH unit, instead of the weaker pH dependence
observed. Thus, water remains as the only viable primary proton acceptor
in the pH range studied.
pH-Dependent CEPT Rate
Constants for Radical
Formation
The weak pH dependence of the PCET rate constants
can be incorrectly believed to reflect a Marcus-type free-energy dependence
of the rate constant on the free energy of the overall process.[37] However, as mentioned in the Introduction section, CEPT rate constants should not be pH-dependent
when H2O is the primary proton acceptor. The apparent pH
dependence of the potential of a proton-coupled redox process (E°′), as reflected in Pourbaix diagrams, is
due to the increase in mixing entropy of the proton with pH. The driving
force for the elementary PCET process is, however, independent of
pH when water is the primary proton acceptor. Similar to the case
for protonation of photoacids, a small cluster of water molecules
acts as the primary acceptor, and the conjugate acid, that is, the
solvated proton (H3O+aq), has pKa ≡ 0. The dilution of the proton in
the bulk water becomes more exergonic with increasing pH, but this
process is not expected to influence the measured rate of the PCET
reaction. Thus, the elementary CEPT step should not be pH-dependent,
as was pointed out by Sjödin et al. already in 2005[9] before publication of refs (20) and (21) and clearly stated in
all published papers on the topic from our group since then. In contrast
to what is stated in ref (7), we agree on this point. However, our group has published
several studies with experimental data showing a similarly weak pH
dependence (slope < 1 of a log k vs pH plot) of
PCET rate constants for several tryptophan and tyrosine derivatives,[6,22,23,37−39] a dependence that currently lacks a theoretical explanation.
This present study adds to that list. The [Ru(dmb)3]3+/WEE system exhibits pH-dependent rate constants that exceed
those limited by ET measured at low pH. Similarly, we can exclude
a PTET mechanism because of the large pKa value of WEE and NAWEE. This strongly suggests a CEPT reaction with
water as the primary proton acceptor.
How
Water Acts as a Proton Acceptor in PT
and PCET
The dynamics of acid deprotonation to H2O has been studied extensively, particularly using photoacids. In
the widely accepted model of Eigen and Weller,[40,41] the excited acid, HA, with pKa >
0 undergoes
an initial proton-transfer step to form an ion pair, stabilized by
solvent fluctuations (eq ). This reversible, endergonic step is followed by dissociation and
solvent cage escape to form the free base, A–, and
hydronium, H3Oaq+The fractional
population of the intermediate
[H3O+···A–]
state depends on the pKa value of the
acid where an increase in one pKa unit
leads to a 10-fold decrease in fractional population. It follows that
the deprotonation rate constant decreases 10-fold per one pKa unit. This trend in deprotonation rate constants
as a function of pKa has been experimentally
observed.[40−42] pH-dependent rate constants for an individual acid
are in general not observed so long as H2O is the primary
proton acceptor.For the present CEPT reaction of tryptophan
and its analogues (W–H),
one may set up a similar model, where the initial reversible step
is coupled to an electron transfer, eq .[6] Here, the intermediate
product is not an ion pair but has the charge-neutral W•; this does not change the basic picture outlined in eq . The external electron acceptor,
for example, [Ru(dmb)3]2+, takes the electron
from [H2O···W–H] in concert with
proton transferThe first step is endergonic because of the high pKa of the radical cation and a slightly lower E° for RuIII/II than for W•+/0.
Just as for acid deprotonation, the CEPT reaction is driven by the
dissociation and cage escape of the proton.For an ETPT mechanism,
the initial ET step is endergonic, and a
situation analogous to CEPT should resultPre-equilibrium
ET and PT lead to the same intermediate [H3O+···W•] state
as in CEPT, which is followed by proton dissociation and cage escape.
With the CEPT and ETPT models, the fractional population of the [H3O+···W•] intermediate
is the same, irrespective of the mechanism, which means that CEPT
would not be disfavored relative to ETPT by the high pKa of W•H+. This picture is
different from previous predictions that are discussed in the Introduction section.[20,21] Since the
CEPT reaction requires both sufficient electronic coupling and wave
function overlap between reactant and product states, CEPT could come
at a kinetic disadvantage compared to stepwise mechanisms. On the
other hand, the reorganization energy may be smaller for CEPT as no
charge is formed on the W unit. Importantly, our present and previous
experiments show that CEPT can indeed be competitive for W in water.[6,9,22,23]The above description of water acting as the primary proton
acceptor
in PCET reactions is not able to explain the observed pH-dependent
rate constants nor the fact that the mechanism changes from ETPT at
low pH to CEPT at neutral and higher pH. This would suggest that our
present knowledge and models for something as fundamentally important
as deprotonation in water are incomplete as it is yet not possible
to fully capture the behavior of PCET reactions.
Conclusions
There is consensus that among Nature’s
20 amino acids, the
most recently evolved members are cysteine, methionine, tyrosine (Y),
tryptophan, and selenocysteine. The appearance of these amino acids
coincides with the increase of oxygen in the Earth’s atmosphere.
The above amino acids are more redox-accessible, making them better
suited to protect enzymes from oxidative damage.[43] Chains of Y and W residues have been identified in approximately
one-third of the protein structures available in the Protein Data
Bank, which points to their importance in natural systems where they
can facilitate long-range electron and radical transfer.[3] How W and Y function in Nature is still not fully
understood, although studies of natural and model systems have provided
much insight. Compared to W, Y has a pKa value of 10 in its reduced form and −2 in its oxidized form;[5] this allows more facile deprotonation of Y. In
a protein environment, Y exhibits a higher reduction potential, E°(Y•+/Y) = 1.510 V, compared to E°(W•+/W) = 1.293 V.[10] This permits easier oxidation for W compared to Y. We have
recently shown that Y buried in a hydrophobic protein environment
can undergo PTET and CEPT with water as the most likely primary proton
acceptor.[44] Similar behavior has been suggested
for Y at the interface between two subunits in Class 1 RNR.[45,46] CEPT from W with water as the primary proton acceptor, discussed
in the Introduction section, is less viable
due to the much larger pKa values of the
reduced and oxidized forms. The large family of DNA photolyase and
cryptochrome enzymes has a common three-W motif where one W is in
a solvent-exposed position and has been shown to undergo ETPT.[47−49] In contrast, the present paper shows that W can undergo CEPT with
water as the primary proton acceptor. While CEPT in W has yet to be
directly observed in natural systems, our results show that PCET in
a surface-exposed W is not limited to ETPT or pure ET by default.Our investigation of WEE and NAWEE has brought further clarity
to the PCET mechanisms in tryptophan model systems. First, we have
shown that the electrostatic effects of side-group deprotonation in
WEE are negligibly small and do not provide a significant contribution
to the pH-dependent rate constants. Second, the change in rate constants
as a function of pH indicates that there must be a change in mechanism
from an ET-limited mechanism at low pH to another mechanism at higher
pH. The mechanism at higher pH values (at pH > pKa of oxidized WEE) is likely CEPT. In some proteins, hydrogen
bonding interactions have been shown to affect the reduction potential
for tyrosine and tryptophan.[50,51] This could result in
changes in apparent reduction potential with pH that are different
from the expected 59 mV/pH unit of a Pourbaix diagram for a 1 electron/1
proton couple. However, such a trend has not been observed in experimental
Pourbaix diagrams of freely solvated tryptophan or tryptophan in small
synthetic proteins, which do not deviate from the 59 mV/pH unit slope.[10,25] Therefore, this cannot explain the observed pH dependence. Third,
we have determined the reduction potentials of WEE and NAWEE and found
that the latter is easier to oxidize. This explains the lack of pH
dependence reported by ref (7) when studying NAWEE with [Ru(dmb)3]3+ as the oxidant. With this oxidant, the reaction can be assigned
to an ET-limited ETPT mechanism which should not exhibit pH-dependent
rate constants. Fourth, we have also shown that when we switch to
a weaker oxidant, [ZnTPPS]3–, NAWEE exhibits pH-dependent
rate constants that parallel those of WEE with [Ru(dmb)3]3+. This is the same behavior observed for Ru-W dyads
that switch mechanism according to the oxidant strength.[6,9,23] Importantly, this shows that
the observed pH dependence is independent of the identity of the tryptophan
analogue or the presence of protonable side groups but rather depends
on the oxidant strength. This supports that both the tryptophan analogues
follow a CEPT mechanism at pH > 5, with a suitably mild oxidant.
Finally,
our results indicate that water is the primary proton acceptor in
this reaction. This is in contrast to earlier theoretical predictions
that tryptophan with its relatively high radical pKa value (∼4.3) would not undergo CEPT with water
as the primary acceptor but rather be restricted to ETPT or ET to
generate the radical cation. This means that tryptophan CEPT with
water as the primary proton acceptor is viable and should be considered
when studying surface-exposed W in both synthetic and natural systems.
Materials and Methods
Electrochemistry
Measurements were
made in 0.1 M KNO3 and 0.5 mM KPi at pH 5.2
using a 2 mm glassy carbon disc (CH Instruments, Inc.) as the working
electrode, Ag/AgCl (4 M) suspended in a salt bridge as the reference
electrode, and a Pt rod as the counter electrode. The working electrode
was polished between each scan using 0.05 μm alumina paste (Buehler
Micropolish II) and then rinsed with water. The cell resistance (Ohmic
drop) was determined using the NOVA program to 120 Ω, and a
90% compensation was used (108 Ω). Cyclic voltammograms were
recorded with 0.2 mM tryptophan analogue at scan rates varying from
0.1 to 5 V/s using the NOVA program and Autolab PGSTAT302. Only scan
rates between 0.1 and 1 V/s were used in determining the apparent
redox potentials; see Supporting Information page S2 for motivation.
Transient Absorption Spectroscopy
Transient absorption (TA) was measured using a ns-laser pump probe
setup as previously described.[44] The sample
was excited using a Nd/YAG laser (Quantel, Brilliant) passed through
an OPO tuned to 460 nm for experiments with [Ru(dmb)3]2+ and 545 nm for experiments with [ZnTPPS]4–. The excitation energies varied from 10 to 12 mJ/pulse for [Ru(dmb)3]2+ excitation and 22–28 mJ/pulse for [ZnTPPS]4– excitation. For two-photon ionization of [Ru(dmb)3]2+, no OPO was used; instead, the sample was excited
by the 355 nm laser light formed after frequency tripling with an
energy of about 100 mJ/pulse. The sample was probed using an unpulsed
Xe arc lamp perpendicular to the excitation light. The probe light
was passed through two monochromators (Applied Photophysics, pbp Spectra
Kinetic Monochromator 05-109) with one before and one after the sample
set to 4- and 2-mm slit openings, respectively. The signal was detected
using a photomultiplier tube (PMT, Hamamatsu R928). The signal was
digitized using an oscilloscope (Agilent Technologies Infiniium 600
MHz) and processed using the Applied Photophysics LKS software. TA
was measured in 4 mm × 10 mm cuvettes with the probe lamp passed
through the 10 mm path for WEE experiments and 10 mm × 10 mm
cuvettes for NAWEE experiments.Samples used for TA spectroscopy
were dissolved in 0.5 mM KPi (KH2PO4 from Sigma Life Science ≥ 99.0% purity, K2HPO4 from Acros Organics 99+% purity). pH was adjusted with 0.1
M NaOH or HCl when necessary and measured using a Metrohm 654 pH meter
and a calibrated Metrohm LL Biotrode pH electrode. pH was measured
before and after TA measurements, and an average was calculated to
account for the change in pH when quenching by [Co(NH3)5Cl]Cl2. Concentrations were determined using a
UV/vis spectrometer (Cary 50), with ε555([ZnTPPS]4–) = 22100 M–1 cm–1,[35] ε455([Ru(dmb)3]2+) = 14 300 M–1 cm–1,[26] and ε280(W-analogue)
= 5500 M–1 cm–1.[52] The concentrations used in the WEE experiments were [WEE]
= 0.1–80 mM, [[Ru(dmb)3]2+] = 25–50
μM, and [[Co(NH3)5Cl]Cl2] =
2.5–5 mM. In the NAWEE experiments, the following concentrations
were used: [NAWEE] = 0.3–0.4 mM, [[ZnTPPS]4–] = 20–25 μM, and [[Co(NH3)5Cl]Cl2] = 0.4–2 mM. In all experiments, the photosensitizer
together with the tryptophan analogue was prepared separately from
the quencher and the two solutions were mixed under dark conditions.
Authors: Kristin J Tyson; Amanda N Davis; Jessica L Norris; Libero J Bartolotti; Eli G Hvastkovs; Adam R Offenbacher Journal: J Phys Chem Lett Date: 2020-03-05 Impact factor: 6.475