Literature DB >> 29177276

Automated glycan assembly of galactosylated xyloglucan oligosaccharides and their recognition by plant cell wall glycan-directed antibodies.

Pietro Dallabernardina1, Colin Ruprecht, Peter J Smith, Michael G Hahn, Breeanna R Urbanowicz, Fabian Pfrengle.   

Abstract

We report the automated glycan assembly of oligosaccharides related to the plant cell wall hemicellulosic polysaccharide xyloglucan. The synthesis of galactosylated xyloglucan oligosaccharides was enabled by introducing p-methoxybenzyl (PMB) as a temporary protecting group for automated glycan assembly. The generated oligosaccharides were printed as microarrays, and the binding of a collection of xyloglucan-directed monoclonal antibodies (mAbs) to the oligosaccharides was assessed. We also demonstrated that the printed glycans can be further enzymatically modified while appended to the microarray surface by Arabidopsis thaliana xyloglucan xylosyltransferase 2 (AtXXT2).

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Year:  2017        PMID: 29177276      PMCID: PMC6082630          DOI: 10.1039/c7ob02605f

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  24 in total

1.  Automated synthesis of arabinoxylan-oligosaccharides enables characterization of antibodies that recognize plant cell wall glycans.

Authors:  Deborah Schmidt; Frank Schuhmacher; Andreas Geissner; Peter H Seeberger; Fabian Pfrengle
Journal:  Chemistry       Date:  2015-02-26       Impact factor: 5.236

2.  Two xyloglucan xylosyltransferases catalyze the addition of multiple xylosyl residues to cellohexaose.

Authors:  David M Cavalier; Kenneth Keegstra
Journal:  J Biol Chem       Date:  2006-09-18       Impact factor: 5.157

Review 3.  Biosynthesis of the Plant Cell Wall Matrix Polysaccharide Xyloglucan.

Authors:  Markus Pauly; Kenneth Keegstra
Journal:  Annu Rev Plant Biol       Date:  2016-02-29       Impact factor: 26.379

4.  Two Arabidopsis proteins synthesize acetylated xylan in vitro.

Authors:  Breeanna R Urbanowicz; Maria J Peña; Heather A Moniz; Kelley W Moremen; William S York
Journal:  Plant J       Date:  2014-09-20       Impact factor: 6.417

5.  Active Site Mapping of Xylan-Deconstructing Enzymes with Arabinoxylan Oligosaccharides Produced by Automated Glycan Assembly.

Authors:  Deborah Senf; Colin Ruprecht; Goswinus H M de Kruijff; Sebastian O Simonetti; Frank Schuhmacher; Peter H Seeberger; Fabian Pfrengle
Journal:  Chemistry       Date:  2017-02-08       Impact factor: 5.236

6.  A comprehensive toolkit of plant cell wall glycan-directed monoclonal antibodies.

Authors:  Sivakumar Pattathil; Utku Avci; David Baldwin; Alton G Swennes; Janelle A McGill; Zoë Popper; Tracey Bootten; Anathea Albert; Ruth H Davis; Chakravarthy Chennareddy; Ruihua Dong; Beth O'Shea; Ray Rossi; Christine Leoff; Glenn Freshour; Rajesh Narra; Malcolm O'Neil; William S York; Michael G Hahn
Journal:  Plant Physiol       Date:  2010-04-02       Impact factor: 8.340

Review 7.  Glycan microarrays for decoding the glycome.

Authors:  Cory D Rillahan; James C Paulson
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

8.  Generation and structural validation of a library of diverse xyloglucan-derived oligosaccharides, including an update on xyloglucan nomenclature.

Authors:  Sami T Tuomivaara; Katsuro Yaoi; Malcolm A O'Neill; William S York
Journal:  Carbohydr Res       Date:  2014-07-09       Impact factor: 2.104

Review 9.  Revealing the structural and functional diversity of plant cell walls.

Authors:  J Paul Knox
Journal:  Curr Opin Plant Biol       Date:  2008-06       Impact factor: 7.834

10.  Structural, mutagenic and in silico studies of xyloglucan fucosylation in Arabidopsis thaliana suggest a water-mediated mechanism.

Authors:  Breeanna R Urbanowicz; Vivek S Bharadwaj; Markus Alahuhta; Maria J Peña; Vladimir V Lunin; Yannick J Bomble; Shuo Wang; Jeong-Yeh Yang; Sami T Tuomivaara; Michael E Himmel; Kelley W Moremen; William S York; Michael F Crowley
Journal:  Plant J       Date:  2017-08-28       Impact factor: 6.417

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  9 in total

Review 1.  Automated Chemical Oligosaccharide Synthesis: Novel Approach to Traditional Challenges.

Authors:  Matteo Panza; Salvatore G Pistorio; Keith J Stine; Alexei V Demchenko
Journal:  Chem Rev       Date:  2018-06-28       Impact factor: 60.622

2.  Glycome and Proteome Components of Golgi Membranes Are Common between Two Angiosperms with Distinct Cell-Wall Structures.

Authors:  Ikenna O Okekeogbu; Sivakumar Pattathil; Susana M González Fernández-Niño; Uma K Aryal; Bryan W Penning; Jeemeng Lao; Joshua L Heazlewood; Michael G Hahn; Maureen C McCann; Nicholas C Carpita
Journal:  Plant Cell       Date:  2019-03-26       Impact factor: 11.277

3.  Synthetic Plant Glycan Microarrays as Tools for Plant Biology.

Authors:  Colin Ruprecht; Fabian Pfrengle
Journal:  Methods Mol Biol       Date:  2022

4.  Heterologous expression of plant glycosyltransferases for biochemistry and structural biology.

Authors:  Pradeep K Prabhakar; Hsin-Tzu Wang; Peter J Smith; Jeong-Yeh Yang; William J Barnes; Maria J Peña; Kelley W Moremen; Breeanna R Urbanowicz
Journal:  Methods Cell Biol       Date:  2020-06-13       Impact factor: 1.441

5.  Desirable plant cell wall traits for higher-quality miscanthus lignocellulosic biomass.

Authors:  Ricardo M F da Costa; Sivakumar Pattathil; Utku Avci; Ana Winters; Michael G Hahn; Maurice Bosch
Journal:  Biotechnol Biofuels       Date:  2019-04-15       Impact factor: 6.040

6.  Traceless Photolabile Linker Expedites the Chemical Synthesis of Complex Oligosaccharides by Automated Glycan Assembly.

Authors:  Kim Le Mai Hoang; Alonso Pardo-Vargas; Yuntao Zhu; Yang Yu; Mirco Loria; Martina Delbianco; Peter H Seeberger
Journal:  J Am Chem Soc       Date:  2019-05-24       Impact factor: 15.419

7.  Automated Glycan Assembly: A Perspective.

Authors:  Mónica Guberman; Peter H Seeberger
Journal:  J Am Chem Soc       Date:  2019-03-28       Impact factor: 15.419

Review 8.  Report on the Current Inventory of the Toolbox for Plant Cell Wall Analysis: Proteinaceous and Small Molecular Probes.

Authors:  Maja G Rydahl; Aleksander R Hansen; Stjepan K Kračun; Jozef Mravec
Journal:  Front Plant Sci       Date:  2018-05-03       Impact factor: 5.753

9.  A Glycan Array-Based Assay for the Identification and Characterization of Plant Glycosyltransferases.

Authors:  Colin Ruprecht; Max P Bartetzko; Deborah Senf; Anna Lakhina; Peter J Smith; Maria J Soto; Hyunil Oh; Jeong-Yeh Yang; Digantkumar Chapla; Daniel Varon Silva; Mads H Clausen; Michael G Hahn; Kelley W Moremen; Breeanna R Urbanowicz; Fabian Pfrengle
Journal:  Angew Chem Int Ed Engl       Date:  2020-06-03       Impact factor: 15.336

  9 in total

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