Literature DB >> 34972933

Synthetic Plant Glycan Microarrays as Tools for Plant Biology.

Colin Ruprecht1,2, Fabian Pfrengle3,4.   

Abstract

Chemically synthesized plant oligosaccharides have recently evolved as powerful molecular tools for plant cell wall biology. Synthetic plant glycan microarrays equipped with these oligosaccharides enable high-throughput analyses of glycan-binding proteins and carbohydrate-active enzymes. To produce these glycan microarrays, small amounts of glycan solution are printed on suitable surfaces for covalent or non-covalent immobilization. Synthetic plant glycan microarrays have been used for example to map the epitopes of plant cell wall-directed antibodies, to characterize glycosyl hydrolases and glycosyl transferases, and to analyze lectin binding. In this chapter, detailed experimental procedures for the production of synthetic glycan microarrays and their use for the characterization of cell wall glycan-directed antibodies are described.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Cell wall glycan-directed antibodies; Glycan microarray; Glycan-binding proteins; Lectins; Plant cell wall oligosaccharides

Mesh:

Substances:

Year:  2022        PMID: 34972933     DOI: 10.1007/978-1-0716-2148-6_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  40 in total

1.  Fabrication of carbohydrate chips for studying protein-carbohydrate interactions.

Authors:  Sungjin Park; Injae Shin
Journal:  Angew Chem Int Ed Engl       Date:  2002-09-02       Impact factor: 15.336

2.  Microbe-focused glycan array screening platform.

Authors:  Andreas Geissner; Anika Reinhardt; Christoph Rademacher; Timo Johannssen; João Monteiro; Bernd Lepenies; Michel Thépaut; Franck Fieschi; Jana Mrázková; Michaela Wimmerova; Frank Schuhmacher; Sebastian Götze; Dan Grünstein; Xiaoqiang Guo; Heung Sik Hahm; Jeyakumar Kandasamy; Daniele Leonori; Christopher E Martin; Sharavathi G Parameswarappa; Sandip Pasari; Mark K Schlegel; Hidenori Tanaka; Guozhi Xiao; You Yang; Claney L Pereira; Chakkumkal Anish; Peter H Seeberger
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-22       Impact factor: 11.205

3.  A comprehensive toolkit of plant cell wall glycan-directed monoclonal antibodies.

Authors:  Sivakumar Pattathil; Utku Avci; David Baldwin; Alton G Swennes; Janelle A McGill; Zoë Popper; Tracey Bootten; Anathea Albert; Ruth H Davis; Chakravarthy Chennareddy; Ruihua Dong; Beth O'Shea; Ray Rossi; Christine Leoff; Glenn Freshour; Rajesh Narra; Malcolm O'Neil; William S York; Michael G Hahn
Journal:  Plant Physiol       Date:  2010-04-02       Impact factor: 8.340

Review 4.  Glycan microarrays for decoding the glycome.

Authors:  Cory D Rillahan; James C Paulson
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

5.  Printed covalent glycan array for ligand profiling of diverse glycan binding proteins.

Authors:  Ola Blixt; Steve Head; Tony Mondala; Christopher Scanlan; Margaret E Huflejt; Richard Alvarez; Marian C Bryan; Fabio Fazio; Daniel Calarese; James Stevens; Nahid Razi; David J Stevens; John J Skehel; Irma van Die; Dennis R Burton; Ian A Wilson; Richard Cummings; Nicolai Bovin; Chi-Huey Wong; James C Paulson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-24       Impact factor: 11.205

6.  Monoclonal antibodies to rhamnogalacturonan I backbone.

Authors:  M-C Ralet; O Tranquet; D Poulain; A Moïse; F Guillon
Journal:  Planta       Date:  2010-03-23       Impact factor: 4.116

7.  Carbohydrate microarrays for the recognition of cross-reactive molecular markers of microbes and host cells.

Authors:  Denong Wang; Shaoyi Liu; Brian J Trummer; Chao Deng; Aili Wang
Journal:  Nat Biotechnol       Date:  2002-03       Impact factor: 54.908

8.  Branched Pectic Galactan in Phloem-Sieve-Element Cell Walls: Implications for Cell Mechanics.

Authors:  Thomas A Torode; Rachel O'Neill; Susan E Marcus; Valérie Cornuault; Sara Pose; Rebecca P Lauder; Stjepan K Kračun; Maja Gro Rydahl; Mathias C F Andersen; William G T Willats; Siobhan A Braybrook; Belinda J Townsend; Mads H Clausen; J Paul Knox
Journal:  Plant Physiol       Date:  2017-11-17       Impact factor: 8.340

9.  Oligosaccharide microarrays for high-throughput detection and specificity assignments of carbohydrate-protein interactions.

Authors:  Shigeyuki Fukui; Ten Feizi; Christine Galustian; Alexander M Lawson; Wengang Chai
Journal:  Nat Biotechnol       Date:  2002-09-03       Impact factor: 54.908

10.  Glycan Microarray-Assisted Identification of IgG Subclass Targets in Schistosomiasis.

Authors:  Y Y Michelle Yang; Angela van Diepen; Katarzyna Brzezicka; Niels-Christian Reichardt; Cornelis H Hokke
Journal:  Front Immunol       Date:  2018-10-09       Impact factor: 7.561

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