Literature DB >> 21469953

Glycan microarrays for decoding the glycome.

Cory D Rillahan1, James C Paulson.   

Abstract

In the last decade, glycan microarrays have revolutionized the analysis of the specificity of glycan-binding proteins (GBPs), providing information that simultaneously illuminates the biology mediated by them and decodes the informational content of the glycome. Numerous methods have emerged for arraying glycans in a "chip" format, and glycan libraries have been assembled that address the diversity of the human glycome. Such arrays have been successfully used for analysis of GBPs, which mediate mammalian biology, host-pathogen interactions, and immune recognition of glycans relevant to vaccine production and cancer antigens. This review covers the development of glycan microarrays and applications that have provided insights into the roles of mammalian and microbial GBPs.

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Year:  2011        PMID: 21469953      PMCID: PMC3116967          DOI: 10.1146/annurev-biochem-061809-152236

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  156 in total

Review 1.  Cell surface biology mediated by low affinity multivalent protein-glycan interactions.

Authors:  Brian E Collins; James C Paulson
Journal:  Curr Opin Chem Biol       Date:  2004-12       Impact factor: 8.822

2.  Sulfation patterns of glycosaminoglycans encode molecular recognition and activity.

Authors:  Cristal I Gama; Sarah E Tully; Naoki Sotogaku; Peter M Clark; Manish Rawat; Nagarajan Vaidehi; William A Goddard; Akinori Nishi; Linda C Hsieh-Wilson
Journal:  Nat Chem Biol       Date:  2006-07-30       Impact factor: 15.040

Review 3.  Chemical approaches to glycobiology.

Authors:  Laura L Kiessling; Rebecca A Splain
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

Review 4.  Carbohydrate vaccines: developing sweet solutions to sticky situations?

Authors:  Rena D Astronomo; Dennis R Burton
Journal:  Nat Rev Drug Discov       Date:  2010-04       Impact factor: 84.694

5.  Versatile fluorescent derivatization of glycans for glycomic analysis.

Authors:  Baoyun Xia; Ziad S Kawar; Tongzhong Ju; Richard A Alvarez; Goverdhan P Sachdev; Richard D Cummings
Journal:  Nat Methods       Date:  2005-11       Impact factor: 28.547

6.  Specificity of DC-SIGN for mannose- and fucose-containing glycans.

Authors:  Ellis van Liempt; Christine M C Bank; Padmaja Mehta; Juan Jesús Garciá-Vallejo; Ziad S Kawar; Rudolf Geyer; Richard A Alvarez; Richard D Cummings; Yvette van Kooyk; Irma van Die
Journal:  FEBS Lett       Date:  2006-10-16       Impact factor: 4.124

7.  Sialoside analogue arrays for rapid identification of high affinity siglec ligands.

Authors:  Ola Blixt; Shoufa Han; Liang Liao; Ying Zeng; Julia Hoffmann; Satoshi Futakawa; James C Paulson
Journal:  J Am Chem Soc       Date:  2008-05-02       Impact factor: 15.419

8.  Structural basis of the preferential binding for globo-series glycosphingolipids displayed by Pseudomonas aeruginosa lectin I.

Authors:  Bertrand Blanchard; Alessandra Nurisso; Emilie Hollville; Cécile Tétaud; Joelle Wiels; Martina Pokorná; Michaela Wimmerová; Annabelle Varrot; Anne Imberty
Journal:  J Mol Biol       Date:  2008-08-22       Impact factor: 5.469

9.  Characterization of murine MGL1 and MGL2 C-type lectins: distinct glycan specificities and tumor binding properties.

Authors:  Satwinder Kaur Singh; Ingeborg Streng-Ouwehand; Manja Litjens; Danny R Weelij; Juan Jesús García-Vallejo; Sandra J van Vliet; Eirikur Saeland; Yvette van Kooyk
Journal:  Mol Immunol       Date:  2009-01-21       Impact factor: 4.407

10.  Ligands for the beta-glucan receptor, Dectin-1, assigned using "designer" microarrays of oligosaccharide probes (neoglycolipids) generated from glucan polysaccharides.

Authors:  Angelina S Palma; Ten Feizi; Yibing Zhang; Mark S Stoll; Alexander M Lawson; Esther Díaz-Rodríguez; María Asunción Campanero-Rhodes; Júlia Costa; Siamon Gordon; Gordon D Brown; Wengang Chai
Journal:  J Biol Chem       Date:  2005-12-21       Impact factor: 5.157

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  158 in total

Review 1.  The detection and discovery of glycan motifs in biological samples using lectins and antibodies: new methods and opportunities.

Authors:  Huiyuan Tang; Peter Hsueh; Doron Kletter; Marshall Bern; Brian Haab
Journal:  Adv Cancer Res       Date:  2015-02-07       Impact factor: 6.242

Review 2.  Glycan microarrays of fluorescently-tagged natural glycans.

Authors:  Xuezheng Song; Jamie Heimburg-Molinaro; David F Smith; Richard D Cummings
Journal:  Glycoconj J       Date:  2015-04-16       Impact factor: 2.916

3.  Synthesis of asymmetrical multiantennary human milk oligosaccharides.

Authors:  Anthony R Prudden; Lin Liu; Chantelle J Capicciotti; Margreet A Wolfert; Shuo Wang; Zhongwei Gao; Lu Meng; Kelley W Moremen; Geert-Jan Boons
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

4.  An Atlas of Human Glycosylation Pathways Enables Display of the Human Glycome by Gene Engineered Cells.

Authors:  Yoshiki Narimatsu; Hiren J Joshi; Rebecca Nason; Julie Van Coillie; Richard Karlsson; Lingbo Sun; Zilu Ye; Yen-Hsi Chen; Katrine T Schjoldager; Catharina Steentoft; Sanae Furukawa; Barbara A Bensing; Paul M Sullam; Andrew J Thompson; James C Paulson; Christian Büll; Gosse J Adema; Ulla Mandel; Lars Hansen; Eric Paul Bennett; Ajit Varki; Sergey Y Vakhrushev; Zhang Yang; Henrik Clausen
Journal:  Mol Cell       Date:  2019-06-18       Impact factor: 17.970

5.  Click and pick: identification of sialoside analogues for siglec-based cell targeting.

Authors:  Cory D Rillahan; Erik Schwartz; Ryan McBride; Valery V Fokin; James C Paulson
Journal:  Angew Chem Int Ed Engl       Date:  2012-10-04       Impact factor: 15.336

Review 6.  The challenge and promise of glycomics.

Authors:  Richard D Cummings; J Michael Pierce
Journal:  Chem Biol       Date:  2014-01-16

7.  Identification of the binding roles of terminal and internal glycan epitopes using enzymatically synthesized N-glycans containing tandem epitopes.

Authors:  Zhigang Wu; Yunpeng Liu; Cheng Ma; Lei Li; Jing Bai; Lauren Byrd-Leotis; Yi Lasanajak; Yuxi Guo; Liuqing Wen; He Zhu; Jing Song; Yanhong Li; David A Steinhauer; David F Smith; Baohua Zhao; Xi Chen; Wanyi Guan; Peng George Wang
Journal:  Org Biomol Chem       Date:  2016-11-29       Impact factor: 3.876

Review 8.  Plant lectins, from ancient sugar-binding proteins to emerging anti-cancer drugs in apoptosis and autophagy.

Authors:  Q-L Jiang; S Zhang; M Tian; S-Y Zhang; T Xie; D-Y Chen; Y-J Chen; J He; J Liu; L Ouyang; X Jiang
Journal:  Cell Prolif       Date:  2014-12-09       Impact factor: 6.831

Review 9.  Multivalent glycoconjugates as anti-pathogenic agents.

Authors:  Anna Bernardi; Jesus Jiménez-Barbero; Alessandro Casnati; Cristina De Castro; Tamis Darbre; Franck Fieschi; Jukka Finne; Horst Funken; Karl-Erich Jaeger; Martina Lahmann; Thisbe K Lindhorst; Marco Marradi; Paul Messner; Antonio Molinaro; Paul V Murphy; Cristina Nativi; Stefan Oscarson; Soledad Penadés; Francesco Peri; Roland J Pieters; Olivier Renaudet; Jean-Louis Reymond; Barbara Richichi; Javier Rojo; Francesco Sansone; Christina Schäffer; W Bruce Turnbull; Trinidad Velasco-Torrijos; Sébastien Vidal; Stéphane Vincent; Tom Wennekes; Han Zuilhof; Anne Imberty
Journal:  Chem Soc Rev       Date:  2012-12-19       Impact factor: 54.564

Review 10.  Chemoenzymatic Methods for the Synthesis of Glycoproteins.

Authors:  Chao Li; Lai-Xi Wang
Journal:  Chem Rev       Date:  2018-08-24       Impact factor: 60.622

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