| Literature DB >> 29137153 |
Janet E Del Bene1, Ibon Alkorta2, José Elguero3.
Abstract
MP2/aug'-cc-pVTZ calculations have been carried out to investigate the halogen-bonded complexes formed when CO and CS act as electron-pair donors through C to ClF, ClNC, ClCl, ClOH, ClCN, ClCCH, and ClNH₂. CO forms only complexes stabilized by traditional halogen bonds, and all ClY molecules form traditional halogen-bonded complexes with SC, except ClF which forms only an ion-pair complex. Ion-pair complexes are also found on the SC:ClNC and SC:ClCl surfaces. SC:ClY complexes stabilized by traditional halogen bonds have greater binding energies than the corresponding OC:ClY complexes. The largest binding energies are found for the ion-pair SC-Cl⁺:-Y complexes. The transition structures which connect the complex and the ion pair on SC:ClNC and SC:ClCl potential surfaces provide the barriers for inter-converting these structures. Charge-transfer from the lone pair on C to the σ-hole on Cl is the primary charge-transfer interaction stabilizing OC:ClY and SC:ClY complexes with traditional halogen bonds. A secondary charge-transfer occurs from the lone pairs on Cl to the in-plane and out-of-plane π antibonding orbitals of ClY. This secondary interaction assumes increased importance in the SC:ClNH₂ complex, and is a factor leading to its unusual structure. C-O and C-S stretching frequencies and 13C chemical shieldings increase upon complex formation with ClY molecules. These two spectroscopic properties clearly differentiate between SC:ClY complexes and SC-Cl⁺:-Y ion pairs. Spin-spin coupling constants 1xJ(C-Cl) for OC:ClY complexes increase with decreasing distance. As a function of the C-Cl distance, 1xJ(C-Cl) and ¹J(C-Cl) provide a fingerprint of the evolution of the halogen bond from a traditional halogen bond in the complexes, to a chlorine-shared halogen bond in the transition structures, to a covalent bond in the ion pairs.Entities:
Keywords: 13C chemical shieldings; EOM-CCSD spin–spin coupling constants; ab initio studies; bonding properties; halogen bonding; stretching frequencies; structures and binding energies
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Year: 2017 PMID: 29137153 PMCID: PMC6150174 DOI: 10.3390/molecules22111955
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Complexes of CO and CS with ClY molecules.
Figure 1MEPs on the −0.025 au isosurfaces of CO and CS.
Binding energies (−ΔE) and charge-transfer energies (Clp → σ*Cl–A and Cllp → π*C–O, kJmol−1), C–Cl distances (R, Å), increases in C–O stretching frequencies (δυ, cm−1) and 13C chemical shieldings (Δδ13C, ppm), and spin–spin coupling constants 1xJ(C–Cl) (Hz) for OC:ClY complexes.
| ClY | −ΔE | R(C–Cl) | Clp → σ*Cl–A a | Cllp → π*C–O b | δυ | Δ | 1xJ(C–Cl) |
|---|---|---|---|---|---|---|---|
| ClF | 15.6 | 2.662 | 43.7 | 10.3 | 16.4 | 4.23 | 65.9 |
| ClNC | 10.9 | 2.997 | 14.3 | 2.6 | 13.8 | 3.45 | 31.7 |
| ClCl | 8.4 | 3.020 | 11.9 | 2.5 | 8.0 | 2.65 | 28.7 |
| ClOH | 8.0 | 3.002 | 13.7 | 2.8 | 6.8 | 2.19 | 27.9 |
| ClCN | 7.7 | 3.225 | 6.0 | 1.0 | 8.1 | 2.27 | 16.7 |
| ClCCH | 5.5 | 3.288 | 4.1 | 0.9 | 4.3 | 1.26 | 13.7 |
| ClNH2 | 4.4 | 3.247 | 5.4 | 1.2 | 2.1 | 0.94 | 14.1 |
a A is the Y atom that is directly bonded to Cl; b Sum of the charge-transfer energies.
Figure 2The complexes OC:ClF and OC:ClOH.
Figure 3Binding energies and charge-transfer energies versus the C–Cl distance in complexes OC:ClY.
Figure 41xJ(C–Cl) versus the C–Cl distance for OC:ClY complexes.
Binding energies (−ΔE) and charge-transfer energies (Clp → σ*Cl–A and Cllp → π*C–S, kJmol−1), C–Cl distances (R, Å), and symmetries of SC:ClY complexes.
| SC:ClY, ClY = | −ΔE | R(C–Cl) | Clp → σ*Cl–A a | Cllp → π*C–S b | Sym |
|---|---|---|---|---|---|
| ClNC | 22.4 | 2.795 | 26.9 | 14.7 | |
| ClCl | 16.8 | 2.768 | 26.4 | 16.0 | |
| ClCN | 15.3 | 3.092 | 8.2 | 5.6 | |
| ClOH | 14.8 | 2.772 | 25.6 | 16.9 | |
| ClCCH | 9.4 | 3.183 | 5.6 | 0.9 | |
| ClNH2 | 6.9 | 3.097 | 5.1 | 6.9 |
a A is the Y atom directly bonded to Cl; b Sum of the charge-transfer energies.
Figure 5Binding energies and charge-transfer energies versus the C-Cl distance for Complexes SC:ClY.
Figure 6Complexes SC:ClOH and SC:ClNH2.
Binding energies (−ΔE), energies of transition structures (-ETS), and barriers to the inter-conversion of complex and ion pair (E‡f, E‡r, kJmol−1), C–Cl and Cl–A distances (R, Å), and symmetries of SC–Cl+:−Y ion pairs.
| Y = | −ΔE | R(C–Cl) | R(Cl–A) a | −ETS | R(C–Cl)TS | E‡f b | E‡r b | Sym |
|---|---|---|---|---|---|---|---|---|
| Fc | 114.7 | 1.613 | 1.917 d | |||||
| Cl | 47.7 | 1.619 | 2.379 e | 6.6 | 2.114 | 10.2 | 41.1 | |
| NC | 23.3 | 1.600 | 2.209 f | −10.9 | 1.979 | 33.3 | 34.2 |
a A is the Y atom directly bonded to Cl in ClY; b The forward reaction: complex → ion pair; the reverse reaction: ion pair → complex; There is no stable SC:ClF complex with a traditional halogen bond on this surface; d Isolated Cl–F: R(Cl–F) = 1.638 Å; e Isolated Cl–Cl: R(Cl–Cl) = 1.999 Å; f Isolated ClNC: R(Cl–N) = 1.624 Å.
Increases in C–S stretching frequencies (δν, cm−1) and 13C chemical shieldings (Δδ13C, ppm), Cl–A and S–C distances (Å), and coupling constants 1xJ(C–Cl), 1xJ(Cl–A), 1J(C–Cl) and 1J(S–C) (Hz) for SC:ClY systems.
| ClY = | Δν a | Δδ13C b | 1xJ(C–Cl) | R(S–C) c | 1J(S–C) c | ||
|---|---|---|---|---|---|---|---|
| ClNC | 22.5 | 21.0 | 60.2 | 1.538 | −35.6 | ||
| ClCl | 15.9 | 18.6 | 62.6 | 1.539 | −36.7 | ||
| ClCN | 11.9 | 12.4 | 28.3 | 1.540 | −36.7 | ||
| ClOH | 12.8 | 14.0 | 53.1 | 1.540 | −37.1 | ||
| ClCCH | 6.0 | 6.8 | 21.7 | 1.541 | −37.5 | ||
| ClNH2 | 2.2 | 4.2 | 18.0 | 1.542 | −38.4 | ||
| F | 159.9 | 186.1 | −77.1 | 449.3 e | 1.917 | 1.540 | −31.0 |
| Cl | 128.1 | 162.3 | −61.9 | 50.7 f | 2.379 | 1.533 | −24.9 |
| NC | 217.3 | 191.6 | −93.1 | −48.6 g | 2.209 | 1.556 | −39.8 |
a The C–S stretching frequency in CS is 1297.1 cm−1; b The 13C chemical shielding in CS is −169.3 ppm; c CS monomer: 1J(S–C) = −39.3 Hz at R(S–C) = 1.543 Å; SC:ClNC transition structure: 1J(S–C) = −40.8 Hz at R(S–C) = 1.532 Å; SC:ClCl transition structure: 1J(S–C) = −39.8 Hz at R(S–C) = 1.536Å; d A is the Y atom directly bonded to Cl in ClY; e Cl–F: 1J(Cl–F) = 798.4 Hz at R = 1.638 Å; f Cl–Cl: 1J(Cl–Cl) = 99.6 Hz at R = 1.999 Å; g ClNC: 1J(Cl–N) = 34.0 Hz at R = 1.634 Å.
Figure 71xJ(C–Cl) for complexes with traditional halogen bonds and transition structures with chlorine-shared halogen bonds, and 1J(C–Cl) for ion-pair complexes versus the C–Cl distance.
Figure 81J(S–C) versus the S–C distance for SC:ClY complexes, transition structures, and ion pairs, and the CS monomer.