Literature DB >> 28990386

An Adaptable Phospholipid Membrane Mimetic System for Solution NMR Studies of Membrane Proteins.

Chih-Ta Henry Chien1, Lukas R Helfinger1, Mark J Bostock1, Andras Solt1, Yi Lei Tan1, Daniel Nietlispach1.   

Abstract

Based on the saposin-A (SapA) scaffold protein, we demonstrate the suitability of a size-adaptable phospholipid membrane-mimetic system for solution NMR studies of membrane proteins (MPs) under close-to-native conditions. The Salipro nanoparticle size can be tuned over a wide pH range by adjusting the saposin-to-lipid stoichiometry, enabling maintenance of sufficiently high amounts of phospholipid in the Salipro nanoparticle to mimic a realistic membrane environment while controlling the overall size to enable solution NMR for a range of MPs. Three representative MPs, including one G-protein-coupled receptor, were successfully incorporated into SapA-dimyristoylphosphatidylcholine nanoparticles and studied by solution NMR spectroscopy.

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Year:  2017        PMID: 28990386      PMCID: PMC6109379          DOI: 10.1021/jacs.7b06730

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

1.  Structure of saposin A lipoprotein discs.

Authors:  Konstantin Popovic; John Holyoake; Régis Pomès; Gilbert G Privé
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-02       Impact factor: 11.205

2.  Quantification of detergent using colorimetric methods in membrane protein crystallography.

Authors:  Chelsy Prince; Zongchao Jia
Journal:  Methods Enzymol       Date:  2015-02-28       Impact factor: 1.600

Review 3.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

Review 4.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

5.  Effective rotational correlation times of proteins from NMR relaxation interference.

Authors:  Donghan Lee; Christian Hilty; Gerhard Wider; Kurt Wüthrich
Journal:  J Magn Reson       Date:  2005-09-26       Impact factor: 2.229

6.  The dynamic process of β(2)-adrenergic receptor activation.

Authors:  Rie Nygaard; Yaozhong Zou; Ron O Dror; Thomas J Mildorf; Daniel H Arlow; Aashish Manglik; Albert C Pan; Corey W Liu; Juan José Fung; Michael P Bokoch; Foon Sun Thian; Tong Sun Kobilka; David E Shaw; Luciano Mueller; R Scott Prosser; Brian K Kobilka
Journal:  Cell       Date:  2013-01-31       Impact factor: 41.582

7.  Backbone NMR reveals allosteric signal transduction networks in the β1-adrenergic receptor.

Authors:  Shin Isogai; Xavier Deupi; Christian Opitz; Franziska M Heydenreich; Ching-Ju Tsai; Florian Brueckner; Gebhard F X Schertler; Dmitry B Veprintsev; Stephan Grzesiek
Journal:  Nature       Date:  2016-02-03       Impact factor: 49.962

8.  Conductance of P2X4 purinergic receptor is determined by conformational equilibrium in the transmembrane region.

Authors:  Yuichi Minato; Shiho Suzuki; Tomoaki Hara; Yutaka Kofuku; Go Kasuya; Yuichiro Fujiwara; Shunsuke Igarashi; Ei-Ichiro Suzuki; Osamu Nureki; Motoyuki Hattori; Takumi Ueda; Ichio Shimada
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-11       Impact factor: 11.205

9.  Detergent-free mass spectrometry of membrane protein complexes.

Authors:  Jonathan T S Hopper; Yvonne Ting-Chun Yu; Dianfan Li; Alison Raymond; Mark Bostock; Idlir Liko; Victor Mikhailov; Arthur Laganowsky; Justin L P Benesch; Martin Caffrey; Daniel Nietlispach; Carol V Robinson
Journal:  Nat Methods       Date:  2013-10-13       Impact factor: 28.547

10.  Membrane proteins bind lipids selectively to modulate their structure and function.

Authors:  Arthur Laganowsky; Eamonn Reading; Timothy M Allison; Martin B Ulmschneider; Matteo T Degiacomi; Andrew J Baldwin; Carol V Robinson
Journal:  Nature       Date:  2014-06-05       Impact factor: 49.962

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  14 in total

Review 1.  GPCR drug discovery: integrating solution NMR data with crystal and cryo-EM structures.

Authors:  Ichio Shimada; Takumi Ueda; Yutaka Kofuku; Matthew T Eddy; Kurt Wüthrich
Journal:  Nat Rev Drug Discov       Date:  2018-11-09       Impact factor: 84.694

Review 2.  Solution NMR: A powerful tool for structural and functional studies of membrane proteins in reconstituted environments.

Authors:  Robbins Puthenveetil; Olga Vinogradova
Journal:  J Biol Chem       Date:  2019-09-24       Impact factor: 5.157

3.  Isotopic Labeling of Eukaryotic Membrane Proteins for NMR Studies of Interactions and Dynamics.

Authors:  Igor Dikiy; Lindsay D Clark; Kevin H Gardner; Daniel M Rosenbaum
Journal:  Methods Enzymol       Date:  2018-12-18       Impact factor: 1.600

Review 4.  On the use of Pichia pastoris for isotopic labeling of human GPCRs for NMR studies.

Authors:  Lindsay Clark; Igor Dikiy; Daniel M Rosenbaum; Kevin H Gardner
Journal:  J Biomol NMR       Date:  2018-08-18       Impact factor: 2.835

Review 5.  The importance of the membrane for biophysical measurements.

Authors:  Dror S Chorev; Carol V Robinson
Journal:  Nat Chem Biol       Date:  2020-11-16       Impact factor: 15.040

6.  Stable Picodisc Assemblies from Saposin Proteins and Branched Detergents.

Authors:  Kathleen W Kurgan; Bifan Chen; Kyle A Brown; Paulo Falco Cobra; Xinyu Ye; Ying Ge; Samuel H Gellman
Journal:  Biochemistry       Date:  2021-03-23       Impact factor: 3.162

7.  The Droserasin 1 PSI: A Membrane-Interacting Antimicrobial Peptide from the Carnivorous Plant Drosera capensis.

Authors:  Marc A Sprague-Piercy; Jan C Bierma; Marquise G Crosby; Brooke P Carpenter; Gemma R Takahashi; Joana Paulino; Ivan Hung; Rongfu Zhang; John E Kelly; Natalia Kozlyuk; Xi Chen; Carter T Butts; Rachel W Martin
Journal:  Biomolecules       Date:  2020-07-17

8.  Saposin Lipid Nanoparticles: A Highly Versatile and Modular Tool for Membrane Protein Research.

Authors:  Ali Flayhan; Haydyn D T Mertens; Yonca Ural-Blimke; Maria Martinez Molledo; Dmitri I Svergun; Christian Löw
Journal:  Structure       Date:  2018-02-06       Impact factor: 5.006

9.  DirectMX - One-Step Reconstitution of Membrane Proteins From Crude Cell Membranes Into Salipro Nanoparticles.

Authors:  Pilar Lloris-Garcerá; Stefan Klinter; Liuhong Chen; Michael J Skynner; Robin Löving; Jens Frauenfeld
Journal:  Front Bioeng Biotechnol       Date:  2020-03-19

Review 10.  Lipid nanoparticle technologies for the study of G protein-coupled receptors in lipid environments.

Authors:  Steven Lavington; Anthony Watts
Journal:  Biophys Rev       Date:  2020-11-19
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