Literature DB >> 28983520

Cross-hierarchy systems principles.

Lea Goentoro1.   

Abstract

One driving motivation of systems biology is the search for general principles that govern the design of biological systems. But questions often arise as to what kind of general principles biology could have. Concepts from engineering such as robustness and modularity are indeed becoming a regular way of describing biological systems. Another source of potential general principles is the emerging similarities found in processes across biological hierarchies. In this piece, I describe several emerging cross-hierarchy similarities. Identification of more cross-hierarchy principles, and understanding the implications these convergence have on the construction of biological systems, I believe, present exciting challenges for systems biology in the decades to come.

Entities:  

Year:  2016        PMID: 28983520      PMCID: PMC5624732          DOI: 10.1016/j.coisb.2016.12.006

Source DB:  PubMed          Journal:  Curr Opin Syst Biol        ISSN: 2452-3100


  21 in total

1.  The connectivity structure, giant strong component and centrality of metabolic networks.

Authors:  Hong-Wu Ma; An-Ping Zeng
Journal:  Bioinformatics       Date:  2003-07-22       Impact factor: 6.937

2.  [Review of: Evelyn Fox Keller, Making sense of life: explaining biological development with models, metaphors, and machines. Cambridge, MA: Harvard University Press, 2002].

Authors:  Michael Ruse
Journal:  Ann Sci       Date:  2004-07       Impact factor: 0.565

3.  The range of attractant concentrations for bacterial chemotaxis and the threshold and size of response over this range. Weber law and related phenomena.

Authors:  R Mesibov; G W Ordal; J Adler
Journal:  J Gen Physiol       Date:  1973-08       Impact factor: 4.086

4.  Dynamic instability of microtubule growth.

Authors:  T Mitchison; M Kirschner
Journal:  Nature       Date:  1984 Nov 15-21       Impact factor: 49.962

5.  Response rescaling in bacterial chemotaxis.

Authors:  Milena D Lazova; Tanvir Ahmed; Domenico Bellomo; Roman Stocker; Thomas S Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

Review 6.  Functional roles for noise in genetic circuits.

Authors:  Avigdor Eldar; Michael B Elowitz
Journal:  Nature       Date:  2010-09-09       Impact factor: 49.962

7.  Modeling the chemotactic response of Escherichia coli to time-varying stimuli.

Authors:  Yuhai Tu; Thomas S Shimizu; Howard C Berg
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-23       Impact factor: 11.205

8.  Fold change of nuclear NF-κB determines TNF-induced transcription in single cells.

Authors:  Robin E C Lee; Sarah R Walker; Kate Savery; David A Frank; Suzanne Gaudet
Journal:  Mol Cell       Date:  2014-02-13       Impact factor: 17.970

Review 9.  Robustness trade-offs and host-microbial symbiosis in the immune system.

Authors:  Hiroaki Kitano; Kanae Oda
Journal:  Mol Syst Biol       Date:  2006-01-17       Impact factor: 11.429

10.  Evolution of bow-tie architectures in biology.

Authors:  Tamar Friedlander; Avraham E Mayo; Tsvi Tlusty; Uri Alon
Journal:  PLoS Comput Biol       Date:  2015-03-23       Impact factor: 4.475

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  1 in total

1.  Hilbert-Schmidt and Sobol sensitivity indices for static and time series Wnt signaling measurements in colorectal cancer - part A.

Authors:  Shriprakash Sinha
Journal:  BMC Syst Biol       Date:  2017-12-04
  1 in total

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