| Literature DB >> 28960548 |
Benjamin Webb1, Shruthi Viswanath1, Massimiliano Bonomi2, Riccardo Pellarin3, Charles H Greenberg1, Daniel Saltzberg1, Andrej Sali1.
Abstract
Building models of a biological system that are consistent with the myriad data available is one of the key challenges in biology. Modeling the structure and dynamics of macromolecular assemblies, for example, can give insights into how biological systems work, evolved, might be controlled, and even designed. Integrative structure modeling casts the building of structural models as a computational optimization problem, for which information about the assembly is encoded into a scoring function that evaluates candidate models. Here, we describe our open source software suite for integrative structure modeling, Integrative Modeling Platform (https://integrativemodeling.org), and demonstrate its use.Keywords: computational optimization; hybrid modeling; integrative modeling; structural biology
Mesh:
Year: 2017 PMID: 28960548 PMCID: PMC5734277 DOI: 10.1002/pro.3311
Source DB: PubMed Journal: Protein Sci ISSN: 0961-8368 Impact factor: 6.725