| Literature DB >> 28794478 |
José Celso Rocha1, Felipe José Passalia1, Felipe Delestro Matos2, Maria Beatriz Takahashi1, Diego de Souza Ciniciato1, Marc Peter Maserati3, Mayra Fernanda Alves3, Tamie Guibu de Almeida3, Bruna Lopes Cardoso3, Andrea Cristina Basso3, Marcelo Fábio Gouveia Nogueira4.
Abstract
Morphological analysis is the standard method of assessing embryo quality; however, its inherent subjectivity tends to generate discrepancies among evaluators. Using genetic algorithms and artificial neural networks (ANNs), we developed a new method for embryo analysis that is more robust and reliable than standard methods. Bovine blastocysts produced in vitro were classified as grade 1 (excellent or good), 2 (fair), or 3 (poor) by three experienced embryologists according to the International Embryo Technology Society (IETS) standard. The images (n = 482) were subjected to automatic feature extraction, and the results were used as input for a supervised learning process. One part of the dataset (15%) was used for a blind test posterior to the fitting, for which the system had an accuracy of 76.4%. Interestingly, when the same embryologists evaluated a sub-sample (10%) of the dataset, there was only 54.0% agreement with the standard (mode for grades). However, when using the ANN to assess this sub-sample, there was 87.5% agreement with the modal values obtained by the evaluators. The presented methodology is covered by National Institute of Industrial Property (INPI) and World Intellectual Property Organization (WIPO) patents and is currently undergoing a commercial evaluation of its feasibility.Entities:
Mesh:
Year: 2017 PMID: 28794478 PMCID: PMC5550425 DOI: 10.1038/s41598-017-08104-9
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Parameters of the best ANN architectures obtained using the GA.
| Parameters | ANN Architecture | |||
|---|---|---|---|---|
| 1 | 2 | 3 | ||
| Neurons | 1st layer | 80 | 95 | 59 |
| Transfer function | between input and 1st layer | tribas | radbas | Tribas |
| output layer | purelin | purelin | Purelin | |
| Training function | trainscg | traincgf | Trainscg | |
| Success grade 1 (%) | 71.4 | 66.7 | 65.0 | |
| Success grade 2 (%) | 71.4 | 78.3 | 70.8 | |
| Success grade 3 (%) | 81.1 | 80.6 | 89.3 | |
| Total success (%) | 76.4 | 76.4 | 76.4 | |
| mse (mean square error) | 0.116 | 0.082 | 0.126 | |
Figure 1Confusion matrix for the ANN test data with architecture 1.
Figure 2ROC curve for the ANN test data with architecture 1.
Figure 3Dynamic performance of the ANN with architecture 1.
Figure 4Tabs and buttons of the user-friendly interface. (a) Tab with options to clear the data or to close the interface; (b) tab with three images as standard models of excellent/good, fair, and poor; (c) tab with the variables and about the authors; (d) tab with the nominal description of the 24 variables; (e) tab with the authors’ details and e-mail correspondences; and (f) Standard, ER, RR, TE, Intersection and Watershed images of the selected embryo.