Literature DB >> 28770442

Diversity and inclusion in genomic research: why the uneven progress?

Amy R Bentley1, Shawneequa Callier1,2, Charles N Rotimi3.   

Abstract

Conducting genomic research in diverse populations has led to numerous advances in our understanding of human history, biology, and health disparities, in addition to discoveries of vital clinical significance. Conducting genomic research in diverse populations is also important in ensuring that the genomic revolution does not exacerbate health disparities by facilitating discoveries that will disproportionately benefit well-represented populations. Despite the general agreement on the need for genomic research in diverse populations in terms of equity and scientific progress, genomic research remains largely focused on populations of European descent. In this article, we describe the rationale for conducting genomic research in diverse populations by reviewing examples of advances facilitated by their inclusion. We also explore some of the factors that perpetuate the disproportionate attention on well-represented populations. Finally, we discuss ongoing efforts to ameliorate this continuing bias. Collaborative and intensive efforts at all levels of research, from the funding of studies to the publication of their findings, will be necessary to ensure that genomic research does not conserve historical inequalities or curtail the contribution that genomics could make to the health of all humanity.

Entities:  

Keywords:  Africa; Diversity; Genomics; Inclusion

Year:  2017        PMID: 28770442      PMCID: PMC5614884          DOI: 10.1007/s12687-017-0316-6

Source DB:  PubMed          Journal:  J Community Genet        ISSN: 1868-310X


  93 in total

1.  Genetic variant representation, annotation and prioritization in the post-GWAS era.

Authors:  Mulin Jun Li; Pak Chung Sham; Junwen Wang
Journal:  Cell Res       Date:  2012-07-17       Impact factor: 25.617

Review 2.  Molecular biology of PCSK9: its role in LDL metabolism.

Authors:  Jay D Horton; Jonathan C Cohen; Helen H Hobbs
Journal:  Trends Biochem Sci       Date:  2007-01-09       Impact factor: 13.807

3.  Common human genetic variants and HIV-1 susceptibility: a genome-wide survey in a homogeneous African population.

Authors:  Slavé Petrovski; Jacques Fellay; Kevin V Shianna; Nicole Carpenetti; Johnstone Kumwenda; Gift Kamanga; Deborah D Kamwendo; Norman L Letvin; Andrew J McMichael; Barton F Haynes; Myron S Cohen; David B Goldstein
Journal:  AIDS       Date:  2011-02-20       Impact factor: 4.177

4.  APOL1 genetic variants in focal segmental glomerulosclerosis and HIV-associated nephropathy.

Authors:  Jeffrey B Kopp; George W Nelson; Karmini Sampath; Randall C Johnson; Giulio Genovese; Ping An; David Friedman; William Briggs; Richard Dart; Stephen Korbet; Michele H Mokrzycki; Paul L Kimmel; Sophie Limou; Tejinder S Ahuja; Jeffrey S Berns; Justyna Fryc; Eric E Simon; Michael C Smith; Howard Trachtman; Donna M Michel; Jeffrey R Schelling; David Vlahov; Martin Pollak; Cheryl A Winkler
Journal:  J Am Soc Nephrol       Date:  2011-10-13       Impact factor: 10.121

Review 5.  Community engagement strategies for genomic studies in Africa: a review of the literature.

Authors:  Paulina Tindana; Jantina de Vries; Megan Campbell; Katherine Littler; Janet Seeley; Patricia Marshall; Jennifer Troyer; Morisola Ogundipe; Vincent Pius Alibu; Aminu Yakubu; Michael Parker
Journal:  BMC Med Ethics       Date:  2015-04-12       Impact factor: 2.652

6.  Genome-wide genotype and sequence-based reconstruction of the 140,000 year history of modern human ancestry.

Authors:  Daniel Shriner; Fasil Tekola-Ayele; Adebowale Adeyemo; Charles N Rotimi
Journal:  Sci Rep       Date:  2014-08-13       Impact factor: 4.379

7.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

8.  Data acquisition and data/knowledge sharing in global genomic studies.

Authors:  Charles Rotimi; Nicola Mulder
Journal:  Appl Transl Genom       Date:  2014-09-11

9.  H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa.

Authors:  Nicola J Mulder; Ezekiel Adebiyi; Raouf Alami; Alia Benkahla; James Brandful; Seydou Doumbia; Dean Everett; Faisal M Fadlelmola; Fatima Gaboun; Simani Gaseitsiwe; Hassan Ghazal; Scott Hazelhurst; Winston Hide; Azeddine Ibrahimi; Yasmina Jaufeerally Fakim; C Victor Jongeneel; Fourie Joubert; Samar Kassim; Jonathan Kayondo; Judit Kumuthini; Sylvester Lyantagaye; Julie Makani; Ahmed Mansour Alzohairy; Daniel Masiga; Ahmed Moussa; Oyekanmi Nash; Odile Ouwe Missi Oukem-Boyer; Ellis Owusu-Dabo; Sumir Panji; Hugh Patterton; Fouzia Radouani; Khalid Sadki; Fouad Seghrouchni; Özlem Tastan Bishop; Nicki Tiffin; Nzovu Ulenga
Journal:  Genome Res       Date:  2015-12-01       Impact factor: 9.438

10.  Genome-wide and fine-resolution association analysis of malaria in West Africa.

Authors:  Muminatou Jallow; Yik Ying Teo; Kerrin S Small; Kirk A Rockett; Panos Deloukas; Taane G Clark; Katja Kivinen; Kalifa A Bojang; David J Conway; Margaret Pinder; Giorgio Sirugo; Fatou Sisay-Joof; Stanley Usen; Sarah Auburn; Suzannah J Bumpstead; Susana Campino; Alison Coffey; Andrew Dunham; Andrew E Fry; Angela Green; Rhian Gwilliam; Sarah E Hunt; Michael Inouye; Anna E Jeffreys; Alieu Mendy; Aarno Palotie; Simon Potter; Jiannis Ragoussis; Jane Rogers; Kate Rowlands; Elilan Somaskantharajah; Pamela Whittaker; Claire Widden; Peter Donnelly; Bryan Howie; Jonathan Marchini; Andrew Morris; Miguel SanJoaquin; Eric Akum Achidi; Tsiri Agbenyega; Angela Allen; Olukemi Amodu; Patrick Corran; Abdoulaye Djimde; Amagana Dolo; Ogobara K Doumbo; Chris Drakeley; Sarah Dunstan; Jennifer Evans; Jeremy Farrar; Deepika Fernando; Tran Tinh Hien; Rolf D Horstmann; Muntaser Ibrahim; Nadira Karunaweera; Gilbert Kokwaro; Kwadwo A Koram; Martha Lemnge; Julie Makani; Kevin Marsh; Pascal Michon; David Modiano; Malcolm E Molyneux; Ivo Mueller; Michael Parker; Norbert Peshu; Christopher V Plowe; Odile Puijalon; John Reeder; Hugh Reyburn; Eleanor M Riley; Anavaj Sakuntabhai; Pratap Singhasivanon; Sodiomon Sirima; Adama Tall; Terrie E Taylor; Mahamadou Thera; Marita Troye-Blomberg; Thomas N Williams; Michael Wilson; Dominic P Kwiatkowski
Journal:  Nat Genet       Date:  2009-05-24       Impact factor: 38.330

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  66 in total

1.  Pathways Between a Polygenic Score for Educational Attainment and Higher Educational Attainment in an African American Sample.

Authors:  Jill A Rabinowitz; Sally I-Chun Kuo; Benjamin Domingue; Mieka Smart; William Felder; Kelly Benke; Brion S Maher; Nicholas S Ialongo; George Uhl
Journal:  Behav Genet       Date:  2019-11-23       Impact factor: 2.805

2.  Trust, Precision Medicine Research, and Equitable Participation of Underserved Populations.

Authors:  Maya Sabatello; Shawneequa Callier; Nanibaa' A Garrison; Elizabeth G Cohn
Journal:  Am J Bioeth       Date:  2018-04       Impact factor: 11.229

Review 3.  Sex and gender differences and biases in artificial intelligence for biomedicine and healthcare.

Authors:  Davide Cirillo; Silvina Catuara-Solarz; Czuee Morey; Emre Guney; Laia Subirats; Simona Mellino; Annalisa Gigante; Alfonso Valencia; María José Rementeria; Antonella Santuccione Chadha; Nikolaos Mavridis
Journal:  NPJ Digit Med       Date:  2020-06-01

4.  The Clinical Sequencing Evidence-Generating Research Consortium: Integrating Genomic Sequencing in Diverse and Medically Underserved Populations.

Authors:  Laura M Amendola; Jonathan S Berg; Carol R Horowitz; Frank Angelo; Jeannette T Bensen; Barbara B Biesecker; Leslie G Biesecker; Gregory M Cooper; Kelly East; Kelly Filipski; Stephanie M Fullerton; Bruce D Gelb; Katrina A B Goddard; Benyam Hailu; Ragan Hart; Kristen Hassmiller-Lich; Galen Joseph; Eimear E Kenny; Barbara A Koenig; Sara Knight; Pui-Yan Kwok; Katie L Lewis; Amy L McGuire; Mary E Norton; Jeffrey Ou; Donald W Parsons; Bradford C Powell; Neil Risch; Mimsie Robinson; Christine Rini; Sarah Scollon; Anne M Slavotinek; David L Veenstra; Melissa P Wasserstein; Benjamin S Wilfond; Lucia A Hindorff; Sharon E Plon; Gail P Jarvik
Journal:  Am J Hum Genet       Date:  2018-09-06       Impact factor: 11.025

Review 5.  Rights, interests and expectations: Indigenous perspectives on unrestricted access to genomic data.

Authors:  Maui Hudson; Nanibaa' A Garrison; Rogena Sterling; Nadine R Caron; Keolu Fox; Joseph Yracheta; Jane Anderson; Phil Wilcox; Laura Arbour; Alex Brown; Maile Taualii; Tahu Kukutai; Rodney Haring; Ben Te Aika; Gareth S Baynam; Peter K Dearden; David Chagné; Ripan S Malhi; Ibrahim Garba; Nicki Tiffin; Deborah Bolnick; Matthew Stott; Anna K Rolleston; Leah L Ballantyne; Ray Lovett; Dominique David-Chavez; Andrew Martinez; Andrew Sporle; Maggie Walter; Jeff Reading; Stephanie Russo Carroll
Journal:  Nat Rev Genet       Date:  2020-04-06       Impact factor: 53.242

6.  Perspectives on Precision Health Among Racial/Ethnic Minority Communities and the Physicians That Serve Them.

Authors:  Lisa G Rosas; Catherine Nasrallah; Van Ta Park; Jan J Vasquez; Ysabel Duron; Owen Garrick; Riccesha Hattin; Mildred Cho; Sean P David; Jill Evans; Rhonda McClinton-Brown; Christopher Martin
Journal:  Ethn Dis       Date:  2020-04-02       Impact factor: 1.847

7.  Attitudes among South African university staff and students towards disclosing secondary genetic findings.

Authors:  Georgina Spies; Jolynne Mokaya; Jacqui Steadman; Nicole Schuitmaker; Martin Kidd; S M J Hemmings; Jonathan A Carr; Helena Kuivaniemi; Soraya Seedat
Journal:  J Community Genet       Date:  2020-11-20

8.  The Use of Racial Categories in Precision Medicine Research.

Authors:  Shawneequa L Callier
Journal:  Ethn Dis       Date:  2019-12-12       Impact factor: 1.847

9.  In Different Voices: The Views of People with Disabilities about Return of Results from Precision Medicine Research.

Authors:  Maya Sabatello; Yuan Zhang; Ying Chen; Paul S Appelbaum
Journal:  Public Health Genomics       Date:  2020-04-15       Impact factor: 2.000

Review 10.  Genetics of Obesity in Diverse Populations.

Authors:  Kristin L Young; Mariaelisa Graff; Lindsay Fernandez-Rhodes; Kari E North
Journal:  Curr Diab Rep       Date:  2018-11-19       Impact factor: 4.810

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