Literature DB >> 2852303

Inosine induced mutations.

P L Nordmann1, J C Makris, W S Reznikoff.   

Abstract

Two complementary 24 base single stranded oligonucleotides containing randomly located inosine residues were synthesized in vitro. Once annealed, the two oligonucleotides were cloned into derivatives of ColE1 and transformed into Escherichia coli. Sequence analysis of 157 clones yielded 305 mutations. The pattern of the mutations revealed the following: (1) The frequency of inosine induced mutations was significantly less than predicted from its content in the oligonucleotides; (2) Inosine incorporation resulted almost exclusively in base changes to guanine; (3) The mutation distribution is biased towards A/T to G/C substitutions; (4) There were reproducible position biases; and (5) There was a reproducible strand bias which was independent of the cassette orientation with respect to the plasmid origin of replication.

Entities:  

Mesh:

Substances:

Year:  1988        PMID: 2852303     DOI: 10.1007/bf00340180

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  18 in total

1.  In vitro mutagenesis.

Authors:  M Smith
Journal:  Annu Rev Genet       Date:  1985       Impact factor: 16.830

2.  Variants in clones of gene-machine-synthesized oligodeoxynucleotides.

Authors:  W H McClain; K Foss; K L Mittelstadt; J Schneider
Journal:  Nucleic Acids Res       Date:  1986-08-26       Impact factor: 16.971

3.  Effect of the direction of DNA replication on mutagenesis by N-methyl-N'-nitro-N-nitrosoguanidine in adapted cells of Escherichia coli.

Authors:  J Reed; F Hutchinson
Journal:  Mol Gen Genet       Date:  1987-07

4.  Asymmetric cytosine deamination revealed by spontaneous mutational specificity in an Ung- strain of Escherichia coli.

Authors:  D F Fix; B W Glickman
Journal:  Mol Gen Genet       Date:  1987-08

5.  Mutational analysis of insertion sequence 50 (IS50) and transposon 5 (Tn5) ends.

Authors:  J C Makris; P L Nordmann; W S Reznikoff
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

6.  Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.

Authors:  E Y Chen; P H Seeburg
Journal:  DNA       Date:  1985-04

7.  An alternative approach to deoxyoligonucleotides as hybridization probes by insertion of deoxyinosine at ambiguous codon positions.

Authors:  E Ohtsuka; S Matsuki; M Ikehara; Y Takahashi; K Matsubara
Journal:  J Biol Chem       Date:  1985-03-10       Impact factor: 5.157

Review 8.  Chemical mutagenesis.

Authors:  B Singer; J T Kuśmierek
Journal:  Annu Rev Biochem       Date:  1982       Impact factor: 23.643

9.  Base pairing involving deoxyinosine: implications for probe design.

Authors:  F H Martin; M M Castro; F Aboul-ela; I Tinoco
Journal:  Nucleic Acids Res       Date:  1985-12-20       Impact factor: 16.971

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

View more
  15 in total

1.  Synthesis of saporin gene probes from partial protein sequence data: use of inosine-oligonucleotides, genomic DNA and the polymerase chain reaction.

Authors:  A P Fordham-Skelton; A Yarwood; R R Croy
Journal:  Mol Gen Genet       Date:  1990-03

2.  In vivo measurements of interindividual differences in DNA glycosylases and APE1 activities.

Authors:  Isaac A Chaim; Zachary D Nagel; Jennifer J Jordan; Patrizia Mazzucato; Le P Ngo; Leona D Samson
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-09       Impact factor: 11.205

3.  The organization of the outside end of transposon Tn5.

Authors:  R A Jilk; D York; W S Reznikoff
Journal:  J Bacteriol       Date:  1996-03       Impact factor: 3.490

4.  Mutagenic potential of hypoxanthine in live human cells.

Authors:  Stephen DeVito; Jordan Woodrick; Linze Song; Rabindra Roy
Journal:  Mutat Res       Date:  2017-06-28       Impact factor: 2.433

5.  Mitochondrial DNA Damage: Prevalence, Biological Consequence, and Emerging Pathways.

Authors:  Linlin Zhao; Philip Sumberaz
Journal:  Chem Res Toxicol       Date:  2020-06-18       Impact factor: 3.739

6.  Implications of Tn5-associated adjacent deletions.

Authors:  R A Jilk; J C Makris; L Borchardt; W S Reznikoff
Journal:  J Bacteriol       Date:  1993-03       Impact factor: 3.490

7.  Hypoxanthine incorporation is nonmutagenic in Escherichia coli.

Authors:  Brian Budke; Andrei Kuzminov
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

8.  Decreased Mitochondrial Mutagenesis during Transformation of Human Breast Stem Cells into Tumorigenic Cells.

Authors:  Eun Hyun Ahn; Seung Hyuk Lee; Joon Yup Kim; Chia-Cheng Chang; Lawrence A Loeb
Journal:  Cancer Res       Date:  2016-05-17       Impact factor: 12.701

9.  Interaction of the recombinant human methylpurine-DNA glycosylase (MPG protein) with oligodeoxyribonucleotides containing either hypoxanthine or abasic sites.

Authors:  F Miao; M Bouziane; T R O'Connor
Journal:  Nucleic Acids Res       Date:  1998-09-01       Impact factor: 16.971

Review 10.  Naturally occurring modified ribonucleosides.

Authors:  Phillip J McCown; Agnieszka Ruszkowska; Charlotte N Kunkler; Kurtis Breger; Jacob P Hulewicz; Matthew C Wang; Noah A Springer; Jessica A Brown
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-04-16       Impact factor: 9.349

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.