Literature DB >> 16952947

Hypoxanthine incorporation is nonmutagenic in Escherichia coli.

Brian Budke1, Andrei Kuzminov.   

Abstract

Endonuclease V, encoded by the nfi gene, initiates removal of the base analogs hypoxanthine and xanthine from DNA, acting to prevent mutagenesis from purine base deamination within the DNA. On the other hand, the RdgB nucleotide hydrolase in Escherichia coli is proposed to prevent hypoxanthine and xanthine incorporation into DNA by intercepting the noncanonical DNA precursors dITP and dXTP. Because many base analogs are mutagenic when incorporated into DNA, it is intuitive to think of RdgB as acting to prevent similar mutagenesis from deaminated purines in the DNA precursor pools. To test this idea, we used a set of Claire Cupples' strains to detect changes in spontaneous mutagenesis spectra, as well as in nitrous acid-induced mutagenesis spectra, in wild-type cells and in rdgB single, nfi single, and rdgB nfi double mutants. We found neither a significant increase in spontaneous mutagenesis in rdgB and nfi single mutants or the double mutant nor any changes in nitrous acid-induced mutagenesis for rdgB mutant strains. We conclude that incorporation of deaminated purines into DNA is nonmutagenic.

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Year:  2006        PMID: 16952947      PMCID: PMC1595496          DOI: 10.1128/JB.00447-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  53 in total

Review 1.  The GO system protects organisms from the mutagenic effect of the spontaneous lesion 8-hydroxyguanine (7,8-dihydro-8-oxoguanine).

Authors:  M L Michaels; J H Miller
Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

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Journal:  Proc Natl Acad Sci U S A       Date:  1962-02       Impact factor: 11.205

3.  Synthesis and properties of oligonucleotides containing 2'-deoxynebularine and 2'-deoxyxanthosine.

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Journal:  Nucleic Acids Res       Date:  1986-10-24       Impact factor: 16.971

Review 4.  Multiple antimutagenesis mechanisms affect mutagenic activity and specificity of the base analog 6-N-hydroxylaminopurine in bacteria and yeast.

Authors:  S G Kozmin; R M Schaaper; P V Shcherbakova; V N Kulikov; V N Noskov; M L Guetsova; V V Alenin; I B Rogozin; K S Makarova; Y I Pavlov
Journal:  Mutat Res       Date:  1998-06-18       Impact factor: 2.433

5.  Formation of Okazaki pieces at the Escherichia coli replication fork in vitro.

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Journal:  Cold Spring Harb Symp Quant Biol       Date:  1979

Review 6.  Genetic effects of nitrous acid.

Authors:  F Zimmermann
Journal:  Mutat Res       Date:  1977       Impact factor: 2.433

7.  RecA-dependent mutants in Escherichia coli reveal strategies to avoid chromosomal fragmentation.

Authors:  Elena A Kouzminova; Ella Rotman; Lee Macomber; Jian Zhang; Andrei Kuzminov
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-05       Impact factor: 11.205

8.  Efficient nitroso group transfer from N-nitrosoindoles to nucleotides and 2'-deoxyguanosine at physiological pH. A new pathway for N-nitrosocompounds to exert genotoxicity.

Authors:  L T Lucas; D Gatehouse; D E Shuker
Journal:  J Biol Chem       Date:  1999-06-25       Impact factor: 5.157

9.  RdgB acts to avoid chromosome fragmentation in Escherichia coli.

Authors:  Jill S Bradshaw; Andrei Kuzminov
Journal:  Mol Microbiol       Date:  2003-06       Impact factor: 3.501

10.  MutY repair is mutagenic in mutT- strains of Escherichia coli.

Authors:  J J Vidmar; C G Cupples
Journal:  Can J Microbiol       Date:  1993-09       Impact factor: 2.419

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  15 in total

1.  Defects in purine nucleotide metabolism lead to substantial incorporation of xanthine and hypoxanthine into DNA and RNA.

Authors:  Bo Pang; Jose L McFaline; Nicholas E Burgis; Min Dong; Koli Taghizadeh; Matthew R Sullivan; C Eric Elmquist; Richard P Cunningham; Peter C Dedon
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

2.  Functional study of the P32T ITPA variant associated with drug sensitivity in humans.

Authors:  Elena I Stepchenkova; Elena R Tarakhovskaya; Kathryn Spitler; Christin Frahm; Miriam R Menezes; Peter D Simone; Carol Kolar; Luis A Marky; Gloria E O Borgstahl; Youri I Pavlov
Journal:  J Mol Biol       Date:  2009-07-23       Impact factor: 5.469

3.  Mechanisms of the Formation of Adenine, Guanine, and Their Analogues in UV-Irradiated Mixed NH3:H2O Molecular Ices Containing Purine.

Authors:  Partha P Bera; Tamar Stein; Martin Head-Gordon; Timothy J Lee
Journal:  Astrobiology       Date:  2017-07-14       Impact factor: 4.335

4.  Determinants of Base-Pair Substitution Patterns Revealed by Whole-Genome Sequencing of DNA Mismatch Repair Defective Escherichia coli.

Authors:  Patricia L Foster; Brittany A Niccum; Ellen Popodi; Jesse P Townes; Heewook Lee; Wazim MohammedIsmail; Haixu Tang
Journal:  Genetics       Date:  2018-06-15       Impact factor: 4.562

5.  Refining the genetic alphabet: a late-period selection pressure?

Authors:  Andro C Rios; Yitzhak Tor
Journal:  Astrobiology       Date:  2012-09       Impact factor: 4.335

6.  Mutagenic potential of hypoxanthine in live human cells.

Authors:  Stephen DeVito; Jordan Woodrick; Linze Song; Rabindra Roy
Journal:  Mutat Res       Date:  2017-06-28       Impact factor: 2.433

7.  Elevated Levels of DNA Strand Breaks Induced by a Base Analog in the Human Cell Line with the P32T ITPA Variant.

Authors:  Irina S-R Waisertreiger; Miriam R Menezes; James Randazzo; Youri I Pavlov
Journal:  J Nucleic Acids       Date:  2010-09-26

8.  Production of clastogenic DNA precursors by the nucleotide metabolism in Escherichia coli.

Authors:  Brian Budke; Andrei Kuzminov
Journal:  Mol Microbiol       Date:  2009-11-25       Impact factor: 3.501

9.  The mutT defect does not elevate chromosomal fragmentation in Escherichia coli because of the surprisingly low levels of MutM/MutY-recognized DNA modifications.

Authors:  Ella Rotman; Andrei Kuzminov
Journal:  J Bacteriol       Date:  2007-07-06       Impact factor: 3.490

10.  Molybdenum cofactor-dependent resistance to N-hydroxylated base analogs in Escherichia coli is independent of MobA function.

Authors:  Stanislav G Kozmin; Roel M Schaaper
Journal:  Mutat Res       Date:  2007-02-02       Impact factor: 2.433

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