Literature DB >> 28507126

Direct observation of structure and dynamics during phase separation of an elastomeric protein.

Sean E Reichheld1, Lisa D Muiznieks1, Fred W Keeley1,2, Simon Sharpe3,2.   

Abstract

Despite its growing importance in biology and in biomaterials development, liquid-liquid phase separation of proteins remains poorly understood. In particular, the molecular mechanisms underlying simple coacervation of proteins, such as the extracellular matrix protein elastin, have not been reported. Coacervation of the elastin monomer, tropoelastin, in response to heat and salt is a critical step in the assembly of elastic fibers in vivo, preceding chemical cross-linking. Elastin-like polypeptides (ELPs) derived from the tropoelastin sequence have been shown to undergo a similar phase separation, allowing formation of biomaterials that closely mimic the material properties of native elastin. We have used NMR spectroscopy to obtain site-specific structure and dynamics of a self-assembling elastin-like polypeptide along its entire self-assembly pathway, from monomer through coacervation and into a cross-linked elastic material. Our data reveal that elastin-like hydrophobic domains are composed of transient β-turns in a highly dynamic and disordered chain, and that this disorder is retained both after phase separation and in elastic materials. Cross-linking domains are also highly disordered in monomeric and coacervated ELP3 and form stable helices only after chemical cross-linking. Detailed structural analysis combined with dynamic measurements from NMR relaxation and diffusion data provides direct evidence for an entropy-driven mechanism of simple coacervation of a protein in which transient and nonspecific intermolecular hydrophobic contacts are formed by disordered chains, whereas bulk water and salt are excluded.

Entities:  

Keywords:  NMR; dynamics; elastin; phase separation; protein structure

Mesh:

Substances:

Year:  2017        PMID: 28507126      PMCID: PMC5465911          DOI: 10.1073/pnas.1701877114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  55 in total

1.  NMR studies of localized water and protein backbone dynamics in mechanically strained elastin.

Authors:  Cheng Sun; Odingo Mitchell; Jiaxin Huang; Gregory S Boutis
Journal:  J Phys Chem B       Date:  2011-11-07       Impact factor: 2.991

Review 2.  Liquid-liquid phase separation in biology.

Authors:  Anthony A Hyman; Christoph A Weber; Frank Jülicher
Journal:  Annu Rev Cell Dev Biol       Date:  2014       Impact factor: 13.827

3.  Sequential assignment of proline-rich regions in proteins: application to modular binding domain complexes.

Authors:  V Kanelis; L Donaldson; D R Muhandiram; D Rotin; J D Forman-Kay; L E Kay
Journal:  J Biomol NMR       Date:  2000-03       Impact factor: 2.835

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

5.  Structural determinants of cross-linking and hydrophobic domains for self-assembly of elastin-like polypeptides.

Authors:  Ming Miao; Judith T Cirulis; Shaun Lee; Fred W Keeley
Journal:  Biochemistry       Date:  2005-11-01       Impact factor: 3.162

Review 6.  Coacervate delivery systems for proteins and small molecule drugs.

Authors:  Noah R Johnson; Yadong Wang
Journal:  Expert Opin Drug Deliv       Date:  2014-08-19       Impact factor: 6.648

7.  Stages in tropoelastin coalescence during synthetic elastin hydrogel formation.

Authors:  Yidong Tu; Steven G Wise; Anthony S Weiss
Journal:  Micron       Date:  2009-11-17       Impact factor: 2.251

8.  Sequence and domain arrangements influence mechanical properties of elastin-like polymeric elastomers.

Authors:  Ming Miao; Eva Sitarz; Catherine M Bellingham; Emily Won; Lisa D Muiznieks; Fred W Keeley
Journal:  Biopolymers       Date:  2013-06       Impact factor: 2.505

9.  Chemical shift referencing in MAS solid state NMR.

Authors:  Corey R Morcombe; Kurt W Zilm
Journal:  J Magn Reson       Date:  2003-06       Impact factor: 2.229

10.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

View more
  55 in total

1.  Molecular wayfinding: Mapping transport dynamics.

Authors:  Christopher M Yip
Journal:  APL Bioeng       Date:  2021-01-04

Review 2.  Generic nature of the condensed states of proteins.

Authors:  Monika Fuxreiter; Michele Vendruscolo
Journal:  Nat Cell Biol       Date:  2021-06-09       Impact factor: 28.824

3.  Molecular model of human tropoelastin and implications of associated mutations.

Authors:  Anna Tarakanova; Giselle C Yeo; Clair Baldock; Anthony S Weiss; Markus J Buehler
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-26       Impact factor: 11.205

Review 4.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

5.  Interaction hot spots for phase separation revealed by NMR studies of a CAPRIN1 condensed phase.

Authors:  Tae Hun Kim; Brandon J Payliss; Michael L Nosella; Ian T W Lee; Yuki Toyama; Julie D Forman-Kay; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

6.  Modeling the Early Stages of Phase Separation in Disordered Elastin-like Proteins.

Authors:  Yue Zhang; Valeria Zai-Rose; Cody J Price; Nicholas A Ezzell; Gene L Bidwell; John J Correia; Nicholas C Fitzkee
Journal:  Biophys J       Date:  2018-04-10       Impact factor: 4.033

Review 7.  The (un)structural biology of biomolecular liquid-liquid phase separation using NMR spectroscopy.

Authors:  Anastasia C Murthy; Nicolas L Fawzi
Journal:  J Biol Chem       Date:  2020-01-07       Impact factor: 5.157

8.  Mechanistic View of hnRNPA2 Low-Complexity Domain Structure, Interactions, and Phase Separation Altered by Mutation and Arginine Methylation.

Authors:  Veronica H Ryan; Gregory L Dignon; Gül H Zerze; Charlene V Chabata; Rute Silva; Alexander E Conicella; Joshua Amaya; Kathleen A Burke; Jeetain Mittal; Nicolas L Fawzi
Journal:  Mol Cell       Date:  2018-01-18       Impact factor: 17.970

9.  Fusion of fibroblast growth factor 21 to a thermally responsive biopolymer forms an injectable depot with sustained anti-diabetic action.

Authors:  Caslin A Gilroy; Stefan Roberts; Ashutosh Chilkoti
Journal:  J Control Release       Date:  2018-03-15       Impact factor: 9.776

Review 10.  Molecular structure in biomolecular condensates.

Authors:  Ivan Peran; Tanja Mittag
Journal:  Curr Opin Struct Biol       Date:  2019-11-29       Impact factor: 6.809

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.