Literature DB >> 29946030

Molecular model of human tropoelastin and implications of associated mutations.

Anna Tarakanova1, Giselle C Yeo2,3, Clair Baldock4, Anthony S Weiss2,3,5, Markus J Buehler6.   

Abstract

Protein folding poses unique challenges for large, disordered proteins due to the low resolution of structural data accessible in experiment and on the basis of short time scales and limited sampling attainable in computation. Such molecules are uniquely suited to accelerated-sampling molecular dynamics algorithms due to a flat-energy landscape. We apply these methods to report here the folded structure in water from a fully extended chain of tropoelastin, a 698-amino acid molecular precursor to elastic fibers that confer elasticity and recoil to tissues, finding good agreement with experimental data. We then study a series of artificial and disease-related mutations, yielding molecular mechanisms to explain structural differences and variation in hierarchical assembly observed in experiment. The present model builds a framework for studying assembly and disease and yields critical insight into molecular mechanisms behind these processes. These results suggest that proteins with disordered regions are suitable candidates for characterization by this approach.

Entities:  

Keywords:  disordered protein; elastic fiber; molecular dynamics; structural protein; tropoelastin

Mesh:

Substances:

Year:  2018        PMID: 29946030      PMCID: PMC6048532          DOI: 10.1073/pnas.1801205115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

1.  Effect of water on the molecular mobility of elastin.

Authors:  Valerie Samouillan; Cédric André; Jany Dandurand; Colette Lacabanne
Journal:  Biomacromolecules       Date:  2004 May-Jun       Impact factor: 6.988

Review 2.  Elastic fibres in health and disease.

Authors:  Andrew K Baldwin; Andreja Simpson; Ruth Steer; Stuart A Cain; Cay M Kielty
Journal:  Expert Rev Mol Med       Date:  2013-08-20       Impact factor: 5.600

3.  NMR studies of localized water and protein backbone dynamics in mechanically strained elastin.

Authors:  Cheng Sun; Odingo Mitchell; Jiaxin Huang; Gregory S Boutis
Journal:  J Phys Chem B       Date:  2011-11-07       Impact factor: 2.991

4.  Structural biology. Versatility from protein disorder.

Authors:  M Madan Babu; Richard W Kriwacki; Rohit V Pappu
Journal:  Science       Date:  2012-09-21       Impact factor: 47.728

Review 5.  Applications of elastin-like polypeptides in tissue engineering.

Authors:  Dana L Nettles; Ashutosh Chilkoti; Lori A Setton
Journal:  Adv Drug Deliv Rev       Date:  2010-04-10       Impact factor: 15.470

Review 6.  Tropoelastin--a multifaceted naturally smart material.

Authors:  Suzanne M Mithieux; Steven G Wise; Anthony S Weiss
Journal:  Adv Drug Deliv Rev       Date:  2012-07-08       Impact factor: 15.470

Review 7.  Applications of elastin-like polypeptides in drug delivery.

Authors:  Sarah R MacEwan; Ashutosh Chilkoti
Journal:  J Control Release       Date:  2014-06-28       Impact factor: 9.776

8.  Computational smart polymer design based on elastin protein mutability.

Authors:  Anna Tarakanova; Wenwen Huang; Anthony S Weiss; David L Kaplan; Markus J Buehler
Journal:  Biomaterials       Date:  2017-01-31       Impact factor: 15.304

9.  Intrinsically disordered energy landscapes.

Authors:  Yassmine Chebaro; Andrew J Ballard; Debayan Chakraborty; David J Wales
Journal:  Sci Rep       Date:  2015-05-22       Impact factor: 4.379

10.  Insights into the regulation of intrinsically disordered proteins in the human proteome by analyzing sequence and gene expression data.

Authors:  Yvonne J K Edwards; Anna E Lobley; Melissa M Pentony; David T Jones
Journal:  Genome Biol       Date:  2009-05-11       Impact factor: 13.583

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  11 in total

1.  Tunable Protein Hydrogels: Present State and Emerging Development.

Authors:  J Nie; X Zhang; W Wang; J Ren; A-P Zeng
Journal:  Adv Biochem Eng Biotechnol       Date:  2021       Impact factor: 2.635

2.  Fast and reversible crosslinking of a silk elastin-like polymer.

Authors:  Constancio Gonzalez-Obeso; J C Rodriguez-Cabello; David L Kaplan
Journal:  Acta Biomater       Date:  2021-12-28       Impact factor: 8.947

Review 3.  Elastic Fibre Proteins in Elastogenesis and Wound Healing.

Authors:  Xinyang Zhang; Yasmene F Alanazi; Thomas A Jowitt; Alan M Roseman; Clair Baldock
Journal:  Int J Mol Sci       Date:  2022-04-07       Impact factor: 6.208

4.  Recent Advances in 3D Printing with Protein-Based Inks.

Authors:  Xuan Mu; Francesca Agostinacchio; Ning Xiang; Ying Pei; Yousef Khan; Chengchen Guo; Peggy Cebe; Antonella Motta; David L Kaplan
Journal:  Prog Polym Sci       Date:  2021-02-16       Impact factor: 29.190

5.  A coarse-grained mechanical model for folding and unfolding of tropoelastin with possible mutations.

Authors:  Giuseppe Florio; Nicola M Pugno; Markus J Buehler; Giuseppe Puglisi
Journal:  Acta Biomater       Date:  2021-07-22       Impact factor: 10.633

6.  Charge-Modulated Accessibility of Tyrosine Residues for Silk-Elastin Copolymer Cross-Linking.

Authors:  Constancio Gonzalez-Obeso; Fredrik G Backlund; David L Kaplan
Journal:  Biomacromolecules       Date:  2022-02-03       Impact factor: 6.978

Review 7.  Tropoelastin and Elastin Assembly.

Authors:  Jazmin Ozsvar; Chengeng Yang; Stuart A Cain; Clair Baldock; Anna Tarakanova; Anthony S Weiss
Journal:  Front Bioeng Biotechnol       Date:  2021-02-25

8.  Fuzzy binding model of molecular interactions between tropoelastin and integrin alphaVbeta3.

Authors:  Jazmin Ozsvar; Richard Wang; Anna Tarakanova; Markus J Buehler; Anthony S Weiss
Journal:  Biophys J       Date:  2021-06-29       Impact factor: 3.699

9.  Coarse-grained model of tropoelastin self-assembly into nascent fibrils.

Authors:  A Tarakanova; J Ozsvar; A S Weiss; M J Buehler
Journal:  Mater Today Bio       Date:  2019-06-18

10.  Transglutaminase-Mediated Cross-Linking of Tropoelastin to Fibrillin Stabilises the Elastin Precursor Prior to Elastic Fibre Assembly.

Authors:  Michael P Lockhart-Cairns; Helena Newandee; Jennifer Thomson; Anthony S Weiss; Clair Baldock; Anna Tarakanova
Journal:  J Mol Biol       Date:  2020-09-06       Impact factor: 5.469

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