Literature DB >> 28488700

Alternative splicing as a regulator of development and tissue identity.

Francisco E Baralle1, Jimena Giudice2,3,4.   

Abstract

Alternative splicing of eukaryotic transcripts is a mechanism that enables cells to generate vast protein diversity from a limited number of genes. The mechanisms and outcomes of alternative splicing of individual transcripts are relatively well understood, and recent efforts have been directed towards studying splicing networks. It has become apparent that coordinated splicing networks regulate tissue and organ development, and that alternative splicing has important physiological functions in different developmental processes in humans.

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Year:  2017        PMID: 28488700      PMCID: PMC6839889          DOI: 10.1038/nrm.2017.27

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  152 in total

1.  Genetic variation in the alternative splicing regulator RBM20 is associated with dilated cardiomyopathy.

Authors:  Marwan M Refaat; Steven A Lubitz; Seiko Makino; Zahid Islam; J Michael Frangiskakis; Haider Mehdi; Rebecca Gutmann; Michael L Zhang; Heather L Bloom; Calum A MacRae; Samuel C Dudley; Alaa A Shalaby; Raul Weiss; Dennis M McNamara; Barry London; Patrick T Ellinor
Journal:  Heart Rhythm       Date:  2011-10-17       Impact factor: 6.343

Review 2.  On the importance of being co-transcriptional.

Authors:  Karla M Neugebauer
Journal:  J Cell Sci       Date:  2002-10-15       Impact factor: 5.285

3.  Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.

Authors:  Qun Pan; Ofer Shai; Leo J Lee; Brendan J Frey; Benjamin J Blencowe
Journal:  Nat Genet       Date:  2008-11-02       Impact factor: 38.330

4.  Tissue-specific splicing of a ubiquitously expressed transcription factor is essential for muscle differentiation.

Authors:  Soji Sebastian; Hervé Faralli; Zizhen Yao; Patricia Rakopoulos; Carmen Palii; Yi Cao; Kulwant Singh; Qi-Cai Liu; Alphonse Chu; Arif Aziz; Marjorie Brand; Stephen J Tapscott; F Jeffrey Dilworth
Journal:  Genes Dev       Date:  2013-05-30       Impact factor: 11.361

Review 5.  Alternative splicing: a pivotal step between eukaryotic transcription and translation.

Authors:  Alberto R Kornblihtt; Ignacio E Schor; Mariano Alló; Gwendal Dujardin; Ezequiel Petrillo; Manuel J Muñoz
Journal:  Nat Rev Mol Cell Biol       Date:  2013-02-06       Impact factor: 94.444

6.  A mutation in the glutamate-rich region of RNA-binding motif protein 20 causes dilated cardiomyopathy through missplicing of titin and impaired Frank-Starling mechanism.

Authors:  Abdelaziz Beqqali; Ilse A E Bollen; Torsten B Rasmussen; Maarten M van den Hoogenhof; Hanneke W M van Deutekom; Sebastian Schafer; Jan Haas; Benjamin Meder; Keld E Sørensen; Ralph J van Oort; Jens Mogensen; Norbert Hubner; Esther E Creemers; Jolanda van der Velden; Yigal M Pinto
Journal:  Cardiovasc Res       Date:  2016-08-05       Impact factor: 10.787

Review 7.  RNA splicing during terminal erythropoiesis.

Authors:  John G Conboy
Journal:  Curr Opin Hematol       Date:  2017-05       Impact factor: 3.284

8.  MRG15 is required for pre-mRNA splicing and spermatogenesis.

Authors:  Naoki Iwamori; Kaoru Tominaga; Tetsuya Sato; Kevin Riehle; Tokuko Iwamori; Yasuyuki Ohkawa; Cristian Coarfa; Etsuro Ono; Martin M Matzuk
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-29       Impact factor: 11.205

9.  TDP-43 affects splicing profiles and isoform production of genes involved in the apoptotic and mitotic cellular pathways.

Authors:  Laura De Conti; Maureen V Akinyi; Ramiro Mendoza-Maldonado; Maurizio Romano; Marco Baralle; Emanuele Buratti
Journal:  Nucleic Acids Res       Date:  2015-08-10       Impact factor: 16.971

10.  The alternative splicing program of differentiated smooth muscle cells involves concerted non-productive splicing of post-transcriptional regulators.

Authors:  Miriam Llorian; Clare Gooding; Nicolas Bellora; Martina Hallegger; Adrian Buckroyd; Xiao Wang; Dipen Rajgor; Melis Kayikci; Jack Feltham; Jernej Ule; Eduardo Eyras; Christopher W J Smith
Journal:  Nucleic Acids Res       Date:  2016-06-17       Impact factor: 16.971

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  353 in total

1.  Opposing roles of miR-294 and MBNL1/2 in shaping the gene regulatory network of embryonic stem cells.

Authors:  Da-Ren Wu; Kai-Li Gu; Jian-Cheng Yu; Xing Fu; Xi-Wen Wang; Wen-Ting Guo; Le-Qi Liao; Hong Zhu; Xiao-Shan Zhang; Jingyi Hui; Yangming Wang
Journal:  EMBO Rep       Date:  2018-05-07       Impact factor: 8.807

2.  An N6-methyladenosine at the transited codon 273 of p53 pre-mRNA promotes the expression of R273H mutant protein and drug resistance of cancer cells.

Authors:  Mohammad B Uddin; Kartik R Roy; Salman B Hosain; Sachin K Khiste; Ronald A Hill; Seetharama D Jois; Yunfeng Zhao; Alan J Tackett; Yong-Yu Liu
Journal:  Biochem Pharmacol       Date:  2018-12-19       Impact factor: 5.858

3.  HIF1 mediates a switch in pyruvate kinase isoforms after myocardial infarction.

Authors:  Allison Lesher Williams; Vedbar Khadka; Mingxin Tang; Abigail Avelar; Kathryn J Schunke; Mark Menor; Ralph V Shohet
Journal:  Physiol Genomics       Date:  2018-04-13       Impact factor: 3.107

Review 4.  Repeat-associated RNA structure and aberrant splicing.

Authors:  Melissa A Hale; Nicholas E Johnson; J Andrew Berglund
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-07-16       Impact factor: 4.490

Review 5.  N6-methyladenosine modifications: interactions with novel RNA-binding proteins and roles in signal transduction.

Authors:  Jiaxin Chen; Xiao Fang; Pengcheng Zhong; Zhangfa Song; Xiaotong Hu
Journal:  RNA Biol       Date:  2019-05-26       Impact factor: 4.652

Review 6.  Peptides encoded by noncoding genes: challenges and perspectives.

Authors:  Shuo Wang; Chuanbin Mao; Shanrong Liu
Journal:  Signal Transduct Target Ther       Date:  2019-12-13

Review 7.  Alternative splicing of lncRNAs in human diseases.

Authors:  Jiaxi Chen; Yawen Liu; Jingyu Min; Huizhi Wang; Feifan Li; Chunhui Xu; Aihua Gong; Min Xu
Journal:  Am J Cancer Res       Date:  2021-03-01       Impact factor: 6.166

Review 8.  RNA Biology in Retinal Development and Disease.

Authors:  Lina Zelinger; Anand Swaroop
Journal:  Trends Genet       Date:  2018-01-31       Impact factor: 11.639

9.  Dynamic changes in gene expression and alternative splicing mediate the response to acute alcohol exposure in Drosophila melanogaster.

Authors:  Sarah Signor; Sergey Nuzhdin
Journal:  Heredity (Edinb)       Date:  2018-08-24       Impact factor: 3.821

Review 10.  Non-coding transcript variants of protein-coding genes - what are they good for?

Authors:  Sonam Dhamija; Manoj B Menon
Journal:  RNA Biol       Date:  2018-09-10       Impact factor: 4.652

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