Literature DB >> 29395379

RNA Biology in Retinal Development and Disease.

Lina Zelinger1, Anand Swaroop2.   

Abstract

For decades, RNA has served in a supporting role between the genetic carrier (DNA) and the functional molecules (proteins). It is finally time for RNA to take center stage in all aspects of biology. The retina provides a unique opportunity to dissect the molecular underpinnings of neuronal diversity and disease. Transcriptome profiles of the retina and its resident cell types have unraveled unique features of the RNA landscape. The discovery of distinct RNA molecules and the recognition that RNA processing is a major cause of retinal neurodegeneration have prompted the design of biomarkers and novel therapeutic paradigms. We review here RNA biology as it pertains to the retina, emphasizing new avenues for investigations in development and disease. Published by Elsevier Ltd.

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Year:  2018        PMID: 29395379      PMCID: PMC5910263          DOI: 10.1016/j.tig.2018.01.002

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  118 in total

Review 1.  Gene networks: dissecting pathways in retinal development and disease.

Authors:  Cheryl Y Gregory-Evans; Valerie A Wallace; Kevin Gregory-Evans
Journal:  Prog Retin Eye Res       Date:  2012-11-02       Impact factor: 21.198

2.  Maturation arrest in early postnatal sensory receptors by deletion of the miR-183/96/182 cluster in mouse.

Authors:  Jianguo Fan; Li Jia; Yan Li; Seham Ebrahim; Helen May-Simera; Alynda Wood; Robert J Morell; Pinghu Liu; Jingqi Lei; Bechara Kachar; Leonardo Belluscio; Haohua Qian; Tiansen Li; Wei Li; Graeme Wistow; Lijin Dong
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-08       Impact factor: 11.205

3.  Dynamic landscape of alternative polyadenylation during retinal development.

Authors:  Wenyan Hu; Shengguo Li; Ji Yeon Park; Sridhar Boppana; Ting Ni; Miaoxin Li; Jun Zhu; Bin Tian; Zhi Xie; Mengqing Xiang
Journal:  Cell Mol Life Sci       Date:  2016-12-18       Impact factor: 9.261

Review 4.  Glucose, lactate, and shuttling of metabolites in vertebrate retinas.

Authors:  James B Hurley; Kenneth J Lindsay; Jianhai Du
Journal:  J Neurosci Res       Date:  2015-03-20       Impact factor: 4.164

5.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

6.  Conserved microRNA pathway regulates developmental timing of retinal neurogenesis.

Authors:  Anna La Torre; Sean Georgi; Thomas A Reh
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-10       Impact factor: 11.205

Review 7.  Alternative splicing and retinal degeneration.

Authors:  M M Liu; D J Zack
Journal:  Clin Genet       Date:  2013-06-05       Impact factor: 4.438

8.  MiR-204 is responsible for inherited retinal dystrophy associated with ocular coloboma.

Authors:  Ivan Conte; Kristen D Hadfield; Sara Barbato; Sabrina Carrella; Mariateresa Pizzo; Rajeshwari S Bhat; Annamaria Carissimo; Marianthi Karali; Louise F Porter; Jill Urquhart; Sofie Hateley; James O'Sullivan; Forbes D C Manson; Stephan C F Neuhauss; Sandro Banfi; Graeme C M Black
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-08       Impact factor: 11.205

9.  A gene regulatory network controls the binary fate decision of rod and bipolar cells in the vertebrate retina.

Authors:  Sui Wang; Cem Sengel; Mark M Emerson; Constance L Cepko
Journal:  Dev Cell       Date:  2014-08-21       Impact factor: 12.270

Review 10.  Metabolic Enzymes Enjoying New Partnerships as RNA-Binding Proteins.

Authors:  Alfredo Castello; Matthias W Hentze; Thomas Preiss
Journal:  Trends Endocrinol Metab       Date:  2015-10-28       Impact factor: 12.015

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  11 in total

1.  Generation, transcriptome profiling, and functional validation of cone-rich human retinal organoids.

Authors:  Sangbae Kim; Albert Lowe; Rachayata Dharmat; Seunghoon Lee; Leah A Owen; Jun Wang; Akbar Shakoor; Yumei Li; Denise J Morgan; Andre A Hejazi; Ales Cvekl; Margaret M DeAngelis; Z Jimmy Zhou; Rui Chen; Wei Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-09       Impact factor: 11.205

Review 2.  Epigenetic control of gene regulation during development and disease: A view from the retina.

Authors:  Ximena Corso-Díaz; Catherine Jaeger; Vijender Chaitankar; Anand Swaroop
Journal:  Prog Retin Eye Res       Date:  2018-03-12       Impact factor: 21.198

3.  Making Biological Sense of Genetic Studies of Age-Related Macular Degeneration.

Authors:  Nivedita Singh; Anand Swaroop; Rinki Ratnapriya
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 4.  Crystallin gene expression: Insights from studies of transcriptional bursting.

Authors:  Ales Cvekl; Carolina Eliscovich
Journal:  Exp Eye Res       Date:  2021-04-21       Impact factor: 3.770

5.  RNA sequencing analysis of the human retina and associated ocular tissues.

Authors:  Scott T Schumacker; Krista R Coppage; Ray A Enke
Journal:  Sci Data       Date:  2020-06-24       Impact factor: 6.444

Review 6.  Mouse Models of Inherited Retinal Degeneration with Photoreceptor Cell Loss.

Authors:  Gayle B Collin; Navdeep Gogna; Bo Chang; Nattaya Damkham; Jai Pinkney; Lillian F Hyde; Lisa Stone; Jürgen K Naggert; Patsy M Nishina; Mark P Krebs
Journal:  Cells       Date:  2020-04-10       Impact factor: 7.666

7.  Identification of novel transcripts and peptides in developing murine lens.

Authors:  Shahid Y Khan; Muhammad Ali; Firoz Kabir; Ruiqiang Chen; Chan Hyun Na; Mei-Chong W Lee; Nader Pourmand; Sean F Hackett; S Amer Riazuddin
Journal:  Sci Rep       Date:  2018-07-24       Impact factor: 4.379

Review 8.  Inherited Eye Diseases with Retinal Manifestations through the Eyes of Homeobox Genes.

Authors:  Yuliya Markitantova; Vladimir Simirskii
Journal:  Int J Mol Sci       Date:  2020-02-26       Impact factor: 5.923

9.  Jmjd3 Plays Pivotal Roles in the Proper Development of Early-Born Retinal Lineages: Amacrine, Horizontal, and Retinal Ganglion Cells.

Authors:  Toshiro Iwagawa; Hiroaki Honda; Sumiko Watanabe
Journal:  Invest Ophthalmol Vis Sci       Date:  2020-09-01       Impact factor: 4.799

10.  Functional Evaluation of Splicing for Variants of Uncertain Significance in Patients with Inherited Retinal Diseases.

Authors:  Margarita Mauro-Herrera; John Chiang; Bojana Radojevic; Lea D Bennett
Journal:  Genes (Basel)       Date:  2021-06-29       Impact factor: 4.096

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