Literature DB >> 33791145

Alternative splicing of lncRNAs in human diseases.

Jiaxi Chen1, Yawen Liu1, Jingyu Min1, Huizhi Wang1, Feifan Li1, Chunhui Xu1, Aihua Gong2, Min Xu1.   

Abstract

Alternative splicing (AS), a vital post-transcription process for eukaryote gene expression regulating, can efficiently improve gene utilization and increase the variety of RNA transcripts and proteins. However, AS of non-coding RNAs (ncRNAs) has not been paid enough attention to compared with that of protein-coding RNAs (mRNAs) for a long time. In fact, AS of ncRNAs, especially long noncoding RNAs (lncRNAs), also plays a significant regulatory role in the human disease. Recently, some bifunctional genes transcribed into both mRNA and lncRNA transcripts by AS have been observed. Here, we focus on the AS of lncRNAs and bifunctional genes producing lncRNA transcripts and propose a strategy for the future research of lncRNA AS. AJCR
Copyright © 2021.

Entities:  

Keywords:  Alternative splicing; bifunctional genes; lncRNAs

Year:  2021        PMID: 33791145      PMCID: PMC7994174     

Source DB:  PubMed          Journal:  Am J Cancer Res        ISSN: 2156-6976            Impact factor:   6.166


  104 in total

1.  Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.

Authors:  Qun Pan; Ofer Shai; Leo J Lee; Brendan J Frey; Benjamin J Blencowe
Journal:  Nat Genet       Date:  2008-11-02       Impact factor: 38.330

2.  A CLK3-HMGA2 Alternative Splicing Axis Impacts Human Hematopoietic Stem Cell Molecular Identity throughout Development.

Authors:  Marcella Cesana; Michael H Guo; Davide Cacchiarelli; Lara Wahlster; Jessica Barragan; Sergei Doulatov; Linda T Vo; Beatrice Salvatori; Cole Trapnell; Kendell Clement; Patrick Cahan; Kaloyan M Tsanov; Patricia M Sousa; Barbara Tazon-Vega; Adriano Bolondi; Federico M Giorgi; Andrea Califano; John L Rinn; Alexander Meissner; Joel N Hirschhorn; George Q Daley
Journal:  Cell Stem Cell       Date:  2018-04-05       Impact factor: 24.633

3.  Alternative Splicing of Nrcam Gene in Dorsal Root Ganglion Contributes to Neuropathic Pain.

Authors:  Lingli Liang; Shaogen Wu; Corinna Lin; Yun-Juan Chang; Yuan-Xiang Tao
Journal:  J Pain       Date:  2020-01-07       Impact factor: 5.820

4.  Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis.

Authors:  Yamile Marquez; John W S Brown; Craig Simpson; Andrea Barta; Maria Kalyna
Journal:  Genome Res       Date:  2012-03-05       Impact factor: 9.043

5.  A regulated PNUTS mRNA to lncRNA splice switch mediates EMT and tumour progression.

Authors:  Simon Grelet; Laura A Link; Breege Howley; Clémence Obellianne; Viswanathan Palanisamy; Vamsi K Gangaraju; J Alan Diehl; Philip H Howe
Journal:  Nat Cell Biol       Date:  2017-08-21       Impact factor: 28.824

Review 6.  SR Proteins: Binders, Regulators, and Connectors of RNA.

Authors:  Sunjoo Jeong
Journal:  Mol Cells       Date:  2017-01-26       Impact factor: 5.034

Review 7.  Paxillin: a crossroad in pathological cell migration.

Authors:  Ana María López-Colomé; Irene Lee-Rivera; Regina Benavides-Hidalgo; Edith López
Journal:  J Hematol Oncol       Date:  2017-02-18       Impact factor: 17.388

8.  Genome-Wide Profiling of Prognostic Alternative Splicing Signature in Colorectal Cancer.

Authors:  Zhen Zong; Hui Li; Chenghao Yi; Houqun Ying; Zhengming Zhu; He Wang
Journal:  Front Oncol       Date:  2018-11-20       Impact factor: 6.244

9.  HOXA10 induces BCL2 expression, inhibits apoptosis, and promotes cell proliferation in gastric cancer.

Authors:  Chenlong Song; Yang Han; Huan Luo; Zhiwei Qin; Zhengqian Chen; Yuan Liu; Su Lu; Huimin Sun; Chongzhi Zhou
Journal:  Cancer Med       Date:  2019-07-30       Impact factor: 4.452

10.  lncRNA PVT1 and its splicing variant function as competing endogenous RNA to regulate clear cell renal cell carcinoma progression.

Authors:  Tao Yang; Hui Zhou; Peijun Liu; Libin Yan; Weimin Yao; Ke Chen; Jin Zeng; Heng Li; Junhui Hu; Hua Xu; Zhangqun Ye
Journal:  Oncotarget       Date:  2017-07-31
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  5 in total

Review 1.  LncRNAs in breast cancer: a link to future approaches.

Authors:  Nikolaos Sideris; Paola Dama; Salih Bayraktar; Thomas Stiff; Leandro Castellano
Journal:  Cancer Gene Ther       Date:  2022-07-04       Impact factor: 5.987

Review 2.  Emerging biology of noncoding RNAs in malaria parasites.

Authors:  Karina Simantov; Manish Goyal; Ron Dzikowski
Journal:  PLoS Pathog       Date:  2022-07-07       Impact factor: 7.464

3.  Long noncoding RNA SNHG25 promotes the malignancy of endometrial cancer by sponging microRNA-497-5p and increasing FASN expression.

Authors:  Yuhua He; Shuifang Xu; Yi Qi; Jinfang Tian; Fengying Xu
Journal:  J Ovarian Res       Date:  2021-11-18       Impact factor: 4.234

Review 4.  Bioinformatic Tools for the Analysis and Prediction of ncRNA Interactions.

Authors:  Andrés Rincón-Riveros; Duvan Morales; Josefa Antonia Rodríguez; Victoria E Villegas; Liliana López-Kleine
Journal:  Int J Mol Sci       Date:  2021-10-22       Impact factor: 5.923

5.  CASC11 and PVT1 spliced transcripts play an oncogenic role in colorectal carcinogenesis.

Authors:  Mina Zamani; Ali-Mohammad Foroughmand; Mohammad-Reza Hajjari; Babak Bakhshinejad; Rory Johnson; Hamid Galehdari
Journal:  Front Oncol       Date:  2022-08-16       Impact factor: 5.738

  5 in total

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