Kiyoung Park1,2, Ning Li3, Yeonju Kwak1, Martin Srnec1, Caleb B Bell1, Lei V Liu1, Shaun D Wong1, Yoshitaka Yoda4, Shinji Kitao5, Makoto Seto5, Michael Hu6, Jiyong Zhao6, Carsten Krebs3,7, J Martin Bollinger3,7, Edward I Solomon1,8. 1. Department of Chemistry, Stanford University , Stanford, California 94305-5080, United States. 2. Department of Chemistry, KAIST , Daejeon 34141, Republic of Korea. 3. Department of Biochemistry and Molecular Biology, Pennsylvania State University , University Park, Pennsylvania 16802, United States. 4. SPring-8/JASRI , Sayo-gun, Hyogo 679-5198, Japan. 5. Research Reactor Institute, Kyoto University , Kumatori-cho, Osaka 590-0494, Japan. 6. Advanced Photon Source, Argonne National Laboratory , Lemont, Illinois 60439, United States. 7. Department of Chemistry, Pennsylvania State University , University Park, Pennsylvania 16802, United States. 8. Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory , Stanford, California 94309, United States.
Abstract
Binuclear non-heme iron enzymes activate O2 for diverse chemistries that include oxygenation of organic substrates and hydrogen atom abstraction. This process often involves the formation of peroxo-bridged biferric intermediates, only some of which can perform electrophilic reactions. To elucidate the geometric and electronic structural requirements to activate peroxo reactivity, the active peroxo intermediate in 4-aminobenzoate N-oxygenase (AurF) has been characterized spectroscopically and computationally. A magnetic circular dichroism study of reduced AurF shows that its electronic and geometric structures are poised to react rapidly with O2. Nuclear resonance vibrational spectroscopic definition of the peroxo intermediate formed in this reaction shows that the active intermediate has a protonated peroxo bridge. Density functional theory computations on the structure established here show that the protonation activates peroxide for electrophilic/single-electron-transfer reactivity. This activation of peroxide by protonation is likely also relevant to the reactive peroxo intermediates in other binuclear non-heme iron enzymes.
Binuclear non-hemen class="Chemical">iron enzymes activate O2 for diverse chemistries that include oxygenation of organic substrates and hydrogen atom abstraction. This process often involves the formation of peroxo-bridged biferric intermediates, only some of which can perform electrophilic reactions. To elucidate the geometric and electronic structural requirements to activate peroxo reactivity, the active peroxo intermediate in 4-aminobenzoate N-oxygenase (AurF) has been characterized spectroscopically and computationally. A magnetic circular dichroism study of reduced AurF shows that its electronic and geometric structures are poised to react rapidly with O2. Nuclear resonance vibrational spectroscopic definition of the peroxo intermediate formed in this reaction shows that the active intermediate has a protonated peroxo bridge. Density functional theory computations on the structure established here show that the protonation activates peroxide for electrophilic/single-electron-transfer reactivity. This activation of peroxide by protonation is likely also relevant to the reactive peroxo intermediates in other binuclear non-hemeiron enzymes.
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