Literature DB >> 28392174

eIF5A Functions Globally in Translation Elongation and Termination.

Anthony P Schuller1, Colin Chih-Chien Wu1, Thomas E Dever2, Allen R Buskirk1, Rachel Green3.   

Abstract

The eukaryotic translation factor eIF5A, originally identified as an initiation factor, was later shown to promote translation elongation of iterated proline sequences. Using a combination of ribosome profiling and in vitro biochemistry, we report a much broader role for eIF5A in elongation and uncover a critical function for eIF5A in termination. Ribosome profiling of an eIF5A-depleted strain reveals a global elongation defect, with abundant ribosomes stalling at many sequences, not limited to proline stretches. Our data also show ribosome accumulation at stop codons and in the 3' UTR, suggesting a global defect in termination in the absence of eIF5A. Using an in vitro reconstituted translation system, we find that eIF5A strongly promotes the translation of the stalling sequences identified by profiling and increases the rate of peptidyl-tRNA hydrolysis more than 17-fold. We conclude that eIF5A functions broadly in elongation and termination, rationalizing its high cellular abundance and essential nature.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  biochemistry; eIF5A; ribosome profiling; translation elongation; translation termination

Mesh:

Substances:

Year:  2017        PMID: 28392174      PMCID: PMC5414311          DOI: 10.1016/j.molcel.2017.03.003

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  63 in total

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Journal:  Biochem Biophys Res Commun       Date:  2009-01-29       Impact factor: 3.575

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Review 4.  Rapid Depletion of Budding Yeast Proteins via the Fusion of an Auxin-Inducible Degron (AID).

Authors:  Kohei Nishimura; Masato T Kanemaki
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5.  Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches.

Authors:  Susanne Ude; Jürgen Lassak; Agata L Starosta; Tobias Kraxenberger; Daniel N Wilson; Kirsten Jung
Journal:  Science       Date:  2012-12-13       Impact factor: 47.728

6.  Reconstitution of yeast translation initiation.

Authors:  Michael G Acker; Sarah E Kolitz; Sarah F Mitchell; Jagpreet S Nanda; Jon R Lorsch
Journal:  Methods Enzymol       Date:  2007       Impact factor: 1.600

7.  Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.

Authors:  Nicholas T Ingolia; Sina Ghaemmaghami; John R S Newman; Jonathan S Weissman
Journal:  Science       Date:  2009-02-12       Impact factor: 47.728

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Authors:  Gregor Blaha; Robin E Stanley; Thomas A Steitz
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9.  Structural basis for stop codon recognition in eukaryotes.

Authors:  Alan Brown; Sichen Shao; Jason Murray; Ramanujan S Hegde; V Ramakrishnan
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10.  Essential structural elements in tRNA(Pro) for EF-P-mediated alleviation of translation stalling.

Authors:  Takayuki Katoh; Ingo Wohlgemuth; Masanobu Nagano; Marina V Rodnina; Hiroaki Suga
Journal:  Nat Commun       Date:  2016-05-24       Impact factor: 14.919

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  152 in total

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2.  Translation Initiation Site Profiling Reveals Widespread Synthesis of Non-AUG-Initiated Protein Isoforms in Yeast.

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Review 5.  The stop-and-go traffic regulating protein biogenesis: How translation kinetics controls proteostasis.

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6.  Assessing Ribosome Distribution Along Transcripts with Polarity Scores and Regression Slope Estimates.

Authors:  Ilya E Vorontsov; Artyom A Egorov; Aleksandra S Anisimova; Irina A Eliseeva; Vsevolod J Makeev; Vadim N Gladyshev; Sergey E Dmitriev; Ivan V Kulakovskiy
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Review 8.  Ribosome Profiling: Global Views of Translation.

Authors:  Nicholas T Ingolia; Jeffrey A Hussmann; Jonathan S Weissman
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-05-01       Impact factor: 10.005

9.  Breaking the Silos of Protein Synthesis.

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Review 10.  Polyamines and Their Role in Virus Infection.

Authors:  Bryan C Mounce; Michelle E Olsen; Marco Vignuzzi; John H Connor
Journal:  Microbiol Mol Biol Rev       Date:  2017-09-13       Impact factor: 11.056

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