Literature DB >> 17913637

Reconstitution of yeast translation initiation.

Michael G Acker1, Sarah E Kolitz, Sarah F Mitchell, Jagpreet S Nanda, Jon R Lorsch.   

Abstract

To facilitate the mechanistic dissection of eukaryotic translation initiation we have reconstituted the steps of this process using purified Saccharomyces cerevisiae components. This system provides a bridge between biochemical studies in vitro and powerful yeast genetic techniques, and complements existing reconstituted mammalian translation systems (Benne and Hershey, 1978; Pestova and Hellen, 2000; Pestova et al., 1998; Trachsel et al., 1977). The following describes methods for synthesizing and purifying the components of the yeast initiation system and assays useful for its characterization.

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Year:  2007        PMID: 17913637     DOI: 10.1016/S0076-6879(07)30006-2

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  98 in total

1.  Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  The 5'-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway.

Authors:  Sarah F Mitchell; Sarah E Walker; Mikkel A Algire; Eun-Hee Park; Alan G Hinnebusch; Jon R Lorsch
Journal:  Mol Cell       Date:  2010-09-24       Impact factor: 17.970

3.  Kinetic and thermodynamic analysis of the role of start codon/anticodon base pairing during eukaryotic translation initiation.

Authors:  Sarah E Kolitz; Julie E Takacs; Jon R Lorsch
Journal:  RNA       Date:  2008-11-24       Impact factor: 4.942

4.  Interaction between 25S rRNA A loop and eukaryotic translation initiation factor 5B promotes subunit joining and ensures stringent AUG selection.

Authors:  Hiroyuki Hiraishi; Byung-Sik Shin; Tsuyoshi Udagawa; Naoki Nemoto; Wasimul Chowdhury; Jymie Graham; Christian Cox; Megan Reid; Susan J Brown; Katsura Asano
Journal:  Mol Cell Biol       Date:  2013-07-08       Impact factor: 4.272

5.  β-Hairpin loop of eukaryotic initiation factor 1 (eIF1) mediates 40 S ribosome binding to regulate initiator tRNA(Met) recruitment and accuracy of AUG selection in vivo.

Authors:  Pilar Martin-Marcos; Jagpreet Nanda; Rafael E Luna; Gerhard Wagner; Jon R Lorsch; Alan G Hinnebusch
Journal:  J Biol Chem       Date:  2013-07-26       Impact factor: 5.157

6.  The 3' mRNA I-shaped structure of maize necrotic streak virus binds to eukaryotic translation factors for eIF4F-mediated translation initiation.

Authors:  Qiao Liu; Dixie J Goss
Journal:  J Biol Chem       Date:  2018-04-26       Impact factor: 5.157

7.  Regulatory elements in eIF1A control the fidelity of start codon selection by modulating tRNA(i)(Met) binding to the ribosome.

Authors:  Adesh K Saini; Jagpreet S Nanda; Jon R Lorsch; Alan G Hinnebusch
Journal:  Genes Dev       Date:  2010-01-01       Impact factor: 11.361

8.  The Nudix hydrolase CDP-chase, a CDP-choline pyrophosphatase, is an asymmetric dimer with two distinct enzymatic activities.

Authors:  Krisna C Duong-Ly; Sandra B Gabelli; Wenlian Xu; Christopher A Dunn; Andrew J Schoeffield; Maurice J Bessman; L Mario Amzel
Journal:  J Bacteriol       Date:  2011-04-29       Impact factor: 3.490

9.  Identification and characterization of functionally critical, conserved motifs in the internal repeats and N-terminal domain of yeast translation initiation factor 4B (yeIF4B).

Authors:  Fujun Zhou; Sarah E Walker; Sarah F Mitchell; Jon R Lorsch; Alan G Hinnebusch
Journal:  J Biol Chem       Date:  2013-11-27       Impact factor: 5.157

10.  Distinct interactions of eIF4A and eIF4E with RNA helicase Ded1 stimulate translation in vivo.

Authors:  Suna Gulay; Neha Gupta; Jon R Lorsch; Alan G Hinnebusch
Journal:  Elife       Date:  2020-05-29       Impact factor: 8.140

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