Literature DB >> 28370463

Retrospective correction of frequency drift in spectral editing: The GABA editing example.

Jan Willem van der Veen1, Stefano Marenco2, Karen F Berman2, Jun Shen1,3.   

Abstract

GABA levels can be measured using proton MRS with a two-step editing sequence. However due to the low concentration of GABA, long acquisition time is usually needed to achieve sufficient SNR to detect small differences in many psychiatric disorders. During this long scan time the frequency offset of the measured voxel can change because of magnetic field drift and patient movement. This drift will change the frequency of the editing pulse relative to that of metabolites, leading to errors in quantification. In this article we describe a retrospective method to correct for frequency drift in spectral editing. A series of reference signals for each metabolite was generated for a range of frequency offsets and then averaged together based on the history of frequency changes over the scan. These customized basis sets were used to fit the in vivo data. Our results demonstrate the effectiveness of the correction method and the remarkable robustness of a GABA editing technique with a top hat editing profile in the presence of frequency drift. Published 2017. This article is a U.S. Government work and is in the public domain in the USA.

Entities:  

Keywords:  GABA editing; drift; magnetic resonance spectroscopy; retrospective correction

Mesh:

Substances:

Year:  2017        PMID: 28370463      PMCID: PMC5511084          DOI: 10.1002/nbm.3725

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  20 in total

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Authors:  Richard A E Edden; Georg Oeltzschner; Ashley D Harris; Nicolaas A J Puts; Kimberly L Chan; Vincent O Boer; Michael Schär; Peter B Barker
Journal:  J Magn Reson Imaging       Date:  2016-05-30       Impact factor: 4.813

5.  Reproducibility of prefrontal γ-aminobutyric acid measurements with J-edited spectroscopy.

Authors:  Matthew Geramita; Jan Willem van der Veen; Alan S Barnett; Antonina A Savostyanova; Jun Shen; Daniel R Weinberger; Stefano Marenco
Journal:  NMR Biomed       Date:  2011-02-03       Impact factor: 4.044

6.  Improvement of resolution for brain coupled metabolites by optimized (1)H MRS at 7T.

Authors:  Changho Choi; Ivan E Dimitrov; Deborah Douglas; Aditya Patel; Lana G Kaiser; Carlos A Amezcua; Elizabeth A Maher
Journal:  NMR Biomed       Date:  2010-11       Impact factor: 4.044

7.  In vivo monitoring of rat brain metabolites during vigabatrin treatment using localized 2D-COSY.

Authors:  John W R Welch; Kishore Bhakoo; Ruth M Dixon; Peter Styles; Nicola R Sibson; Andrew M Blamire
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8.  Reduced prefrontal glutamate/glutamine and gamma-aminobutyric acid levels in major depression determined using proton magnetic resonance spectroscopy.

Authors:  Gregor Hasler; Jan Willem van der Veen; Toni Tumonis; Noah Meyers; Jun Shen; Wayne C Drevets
Journal:  Arch Gen Psychiatry       Date:  2007-02

9.  Regional difference in GABA levels between medial prefrontal and occipital cortices.

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Journal:  J Magn Reson Imaging       Date:  2013-01-24       Impact factor: 4.813

10.  Frequency and phase drift correction of magnetic resonance spectroscopy data by spectral registration in the time domain.

Authors:  Jamie Near; Richard Edden; C John Evans; Raphaël Paquin; Ashley Harris; Peter Jezzard
Journal:  Magn Reson Med       Date:  2014-01-16       Impact factor: 4.668

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  10 in total

1.  Simultaneous measurement of glutamate, glutamine, GABA, and glutathione by spectral editing without subtraction.

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2.  Comparison of linear combination modeling strategies for edited magnetic resonance spectroscopy at 3 T.

Authors:  Helge J Zöllner; Sofie Tapper; Steve C N Hui; Peter B Barker; Richard A E Edden; Georg Oeltzschner
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3.  Monte Carlo study of metabolite correlations originating from spectral overlap.

Authors:  Sungtak Hong; Li An; Jun Shen
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4.  Frequency and phase correction for multiplexed edited MRS of GABA and glutathione.

Authors:  Mark Mikkelsen; Muhammad G Saleh; Jamie Near; Kimberly L Chan; Tao Gong; Ashley D Harris; Georg Oeltzschner; Nicolaas A J Puts; Kim M Cecil; Iain D Wilkinson; Richard A E Edden
Journal:  Magn Reson Med       Date:  2017-12-07       Impact factor: 4.668

5.  Estimating glutamate and Glx from GABA-optimized MEGA-PRESS: Off-resonance but not difference spectra values correspond to PRESS values.

Authors:  Richard J Maddock; Michael D Caton; J Daniel Ragland
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6.  Advanced Hadamard-encoded editing of seven low-concentration brain metabolites: Principles of HERCULES.

Authors:  Georg Oeltzschner; Muhammad G Saleh; Daniel Rimbault; Mark Mikkelsen; Kimberly L Chan; Nicolaas A J Puts; Richard A E Edden
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7.  Whole-slice mapping of GABA and GABA+ at 7T via adiabatic MEGA-editing, real-time instability correction, and concentric circle readout.

Authors:  Philipp Moser; Lukas Hingerl; Bernhard Strasser; Michal Považan; Gilbert Hangel; Ovidiu C Andronesi; Andre van der Kouwe; Stephan Gruber; Siegfried Trattnig; Wolfgang Bogner
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8.  Spectral editing in 1 H magnetic resonance spectroscopy: Experts' consensus recommendations.

Authors:  In-Young Choi; Ovidiu C Andronesi; Peter Barker; Wolfgang Bogner; Richard A E Edden; Lana G Kaiser; Phil Lee; Małgorzata Marjańska; Melissa Terpstra; Robin A de Graaf
Journal:  NMR Biomed       Date:  2020-09-18       Impact factor: 4.044

9.  Preprocessing, analysis and quantification in single-voxel magnetic resonance spectroscopy: experts' consensus recommendations.

Authors:  Jamie Near; Ashley D Harris; Christoph Juchem; Roland Kreis; Małgorzata Marjańska; Gülin Öz; Johannes Slotboom; Martin Wilson; Charles Gasparovic
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10.  Frequency drift in MR spectroscopy at 3T.

Authors:  Steve C N Hui; Mark Mikkelsen; Helge J Zöllner; Vishwadeep Ahluwalia; Sarael Alcauter; Laima Baltusis; Deborah A Barany; Laura R Barlow; Robert Becker; Jeffrey I Berman; Adam Berrington; Pallab K Bhattacharyya; Jakob Udby Blicher; Wolfgang Bogner; Mark S Brown; Vince D Calhoun; Ryan Castillo; Kim M Cecil; Yeo Bi Choi; Winnie C W Chu; William T Clarke; Alexander R Craven; Koen Cuypers; Michael Dacko; Camilo de la Fuente-Sandoval; Patricia Desmond; Aleksandra Domagalik; Julien Dumont; Niall W Duncan; Ulrike Dydak; Katherine Dyke; David A Edmondson; Gabriele Ende; Lars Ersland; C John Evans; Alan S R Fermin; Antonio Ferretti; Ariane Fillmer; Tao Gong; Ian Greenhouse; James T Grist; Meng Gu; Ashley D Harris; Katarzyna Hat; Stefanie Heba; Eva Heckova; John P Hegarty; Kirstin-Friederike Heise; Shiori Honda; Aaron Jacobson; Jacobus F A Jansen; Christopher W Jenkins; Stephen J Johnston; Christoph Juchem; Alayar Kangarlu; Adam B Kerr; Karl Landheer; Thomas Lange; Phil Lee; Swati Rane Levendovszky; Catherine Limperopoulos; Feng Liu; William Lloyd; David J Lythgoe; Maro G Machizawa; Erin L MacMillan; Richard J Maddock; Andrei V Manzhurtsev; María L Martinez-Gudino; Jack J Miller; Heline Mirzakhanian; Marta Moreno-Ortega; Paul G Mullins; Shinichiro Nakajima; Jamie Near; Ralph Noeske; Wibeke Nordhøy; Georg Oeltzschner; Raul Osorio-Duran; Maria C G Otaduy; Erick H Pasaye; Ronald Peeters; Scott J Peltier; Ulrich Pilatus; Nenad Polomac; Eric C Porges; Subechhya Pradhan; James Joseph Prisciandaro; Nicolaas A Puts; Caroline D Rae; Francisco Reyes-Madrigal; Timothy P L Roberts; Caroline E Robertson; Jens T Rosenberg; Diana-Georgiana Rotaru; Ruth L O'Gorman Tuura; Muhammad G Saleh; Kristian Sandberg; Ryan Sangill; Keith Schembri; Anouk Schrantee; Natalia A Semenova; Debra Singel; Rouslan Sitnikov; Jolinda Smith; Yulu Song; Craig Stark; Diederick Stoffers; Stephan P Swinnen; Rongwen Tain; Costin Tanase; Sofie Tapper; Martin Tegenthoff; Thomas Thiel; Marc Thioux; Peter Truong; Pim van Dijk; Nolan Vella; Rishma Vidyasagar; Andrej Vovk; Guangbin Wang; Lars T Westlye; Timothy K Wilbur; William R Willoughby; Martin Wilson; Hans-Jörg Wittsack; Adam J Woods; Yen-Chien Wu; Junqian Xu; Maria Yanez Lopez; David K W Yeung; Qun Zhao; Xiaopeng Zhou; Gasper Zupan; Richard A E Edden
Journal:  Neuroimage       Date:  2021-07-24       Impact factor: 6.556

  10 in total

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