| Literature DB >> 28249034 |
J Max Goodson1, Mor-Li Hartman1, Ping Shi1, Hatice Hasturk1, Tina Yaskell1, Jorel Vargas1, Xiaoqing Song1, Maryann Cugini1, Roula Barake2, Osama Alsmadi2, Sabiha Al-Mutawa3, Jitendra Ariga3, Pramod Soparkar1, Jawad Behbehani4, Kazem Behbehani2.
Abstract
BACKGROUND: Type II diabetes (T2D) has been associated with changes in oral bacterial diversity and frequency. It is not known whether these changes are part of the etiology of T2D, or one of its effects.Entities:
Mesh:
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Year: 2017 PMID: 28249034 PMCID: PMC5331956 DOI: 10.1371/journal.pone.0170437
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Median phyla frequencies under conditions of LSG and HSG.
Data are sorted by difference (HSG-LSG), such that negative values represent a decrease in percentage under HSG conditions. The random forest ROC area under the curve for phyla = 0.884. Source data is listed in S2 Table.
| Median Bacteria % | ||||||
|---|---|---|---|---|---|---|
| Phyla % decreasing with high glucose | Random forest Importance | Univariate AUC | Low salivary glucose (LSG) | High salivary glucose (HSG) | Difference | Hypothesis testing (p,χ2) |
| 100.0 | 0.77 | 20.3 | 14.6 | -5.7 | <0.001, 117 | |
| 45.5 | 0.69 | 9.6 | 7.6 | -2.0 | <0.001, 60 | |
| 21.4 | 0.51 | 20.7 | 20.4 | -0.3 | 0.3, 0.6 | |
| Phyla % increasing with high glucose | ||||||
| 36.2 | 0.64 | 39.9 | 44.2 | 4.3 | <0.001, 23 | |
| 70.8 | 0.62 | 0.6 | 1.0 | 0.4 | <0.001, 37 | |
| 45.1 | 0.60 | 6.7 | 8.1 | 1.4 | <0.001, 32 | |
Bacterial species used to make oligonucleotide DNA probes.
The mean bacterial count and mean bacterial percent were averaged over the study population of 8,173 adolescents.
| Numbers/ml x 10−5 | Percent | ||||
|---|---|---|---|---|---|
| Bacterial Name | Abbreviation | Phylum | ATCC | (MeanN ±S.D.) | (MeanN ±S.D.) |
| Actinobacteria | 23860 | 1.95 ± 2.08 | 1.53 ± 0.90 | ||
| Actinobacteria | 12102 | 1.36 ± 1.39 | 1.03 ± 0.69 | ||
| Actinobacteria | 12104 | 1.92 ± 1.71 | 1.68 ± 1.04 | ||
| Actinobacteria | 17929 | 4.25 ± 4.89 | 3.24 ± 1.91 | ||
| Actinobacteria | 43146 | 2.10 ± 2.24 | 1.63 ± 1.05 | ||
| Proteobacteria | 43718 (Y4) & 29523 | 1.22 ± 1.09 | 1.06 ± 0.73 | ||
| Proteobacteria | 33236 (1084) | 0.26 ± 0.81 | 0.19 ± 0.29 | ||
| Proteobacteria | 33238 (371) | 0.97 ± 1.84 | 0.80 ± 1.38 | ||
| Proteobacteria | 51146 | 1.45 ± 1.56 | 1.17 ± 0.78 | ||
| Bacteroidetes | 33624 (27) | 1.69 ± 1.85 | 1.34 ± 0.89 | ||
| Bacteroidetes | (25) | 1.52 ± 1.11 | 1.35 ± 0.68 | ||
| Bacteroidetes | 33612 (4) | 2.51 ± 2.22 | 2.29 ± 1.72 | ||
| Proteobacteria | 23834 | 12.11 ± 79.35 | 7.35 ± 5.73 | ||
| Fusobacteria | 25586 | 1.96 ± 8.92 | 1.40 ± 1.36 | ||
| Fusobacteria | 10953 | 1.55 ± 1.70 | 1.28 ± 0.70 | ||
| Fusobacteria | 49256 | 1.62 ± 8.51 | 1.19 ± 2.18 | ||
| Fusobacteria | 33693 | 2.63 ± 4.38 | 2.02 ± 1.49 | ||
| Firmicutes | 27824 | 1.78 ± 1.63 | 1.50 ± 0.83 | ||
| Firmicutes | 33271 | 1.16 ± 0.84 | 1.03 ± 0.58 | ||
| Fusobacteria | 14201 | 1.10 ± 2.73 | 1.02 ± 0.96 | ||
| Proteobacteria | 19696 | 13.99 ± 14.24 | 12.17 ± 6.42 | ||
| Firmicutes | 33270 | 0.94 ± 0.76 | 0.91 ± 0.69 | ||
| Firmicutes | 33099 | 0.45 ± 0.47 | 0.37 ± 0.38 | ||
| Bacteroidetes | 33277 | 2.54 ± 3.01 | 2.35 ± 2.92 | ||
| Bacteroidetes | 25611 | 2.04 ± 5.36 | 1.44 ± 1.07 | ||
| Bacteroidetes | 25845 | 9.15 ± 8.86 | 7.27 ± 4.09 | ||
| Bacteroidetes | 33563 | 3.89 ± 4.32 | 2.96 ± 1.72 | ||
| Actinobacteria | 11827 & 11828 | 0.55 ± 0.60 | 0.41 ± 0.35 | ||
| Firmicutes | 43541 | 2.06 ± 1.85 | 1.72 ± 0.89 | ||
| Firmicutes | 33397 | 1.17 ± 1.04 | 0.95 ± 0.53 | ||
| Firmicutes | 27823 (M32b) | 1.72 ± 1.78 | 1.47 ± 0.99 | ||
| Firmicutes | 10558 | 2.15 ± 2.10 | 1.70 ± 0.82 | ||
| Firmicutes | 27335 | 1.76 ± 1.62 | 1.47 ± 0.88 | ||
| Firmicutes | 49456 | 11.53 ± 11.42 | 10.0 ± 5.77 | ||
| Firmicutes | 25175 | 1.44 ± 1.57 | 1.26 ± 0.79 | ||
| Firmicutes | 35037 | 6.85 ± 7.14 | 5.58 ± 2.57 | ||
| Firmicutes | 27945 | 5.01 ± 7.56 | 3.72 ± 2.46 | ||
| Firmicutes | 10556 | 3.00 ± 2.68 | 2.55 ± 1.34 | ||
| Bacteroidetes | 43037 (338) | 0.61 ± 0.55 | 0.48 ± 0.35 | ||
| Spirochaetes | (B1) | 0.61 ± 0.67 | 0.51 ± 0.52 | ||
| Spirochaetes | (D40DR2) (S1) | 0.66 ± 0.95 | 0.57 ± 0.91 | ||
| Firmicutes | 10790 | 7.31 ± 7.43 | 6.04 ± 3.04 |
a Formerly Actinomyces naeslundii 1.
b Formerly Actinomyces naeslundii 2.
c Formerly Actinobacillus actinomycetemcomitans.
d Formerly Eubacterium saburreum.
e Formerly Eubacterium nodatum.
Demographic and clinical variables for the total study population of 8,173 adolescents by sex.
| Variable | Overall | Male | Female | |
|---|---|---|---|---|
| N (%) | 8,173 (100%) | 3,181 (38.9%) | 5,068 (61.1%) | <0.001 |
| Obese (%) | 2,789 (34.1%) | 1,215 (38.2%) | 1,574 (31.0%) | <0.001 |
| Age (y) | 10.00 ± 0.67 | 9.99 ± 0.67 | 10.00 ± 0.67 | 0.5 |
| Salivary flow rate (mL/h) | 26.02 ± 15.56 | 28.22 ± 17.06 | 24.64 ± 14.36 | <0.001 |
| Salivary glucose (mg/dL) | 0.19 ± 0.24 | 0.22 ± 0.28 | 0.18 ± 0.22 | <0.001 |
| BMI (kg/m2) | 20.89 ± 5.21 | 20.92 ± 5.37 | 20.83 ± 5.12 | 0.5 |
| Carious or filled teeth (%) | 10.92 ± 10.41 | 11.87 ± 10.82 | 10.43 ± 10.16 | <0.001 |
| Carious teeth (%) | 6.97 ± 8.96 | 7.73 ± 9.35 | 6.58 ± 8.73 | <0.001 |
| Red gingival sites (%) | 74.85 ± 21.16 | 73.47 ± 21.78 | 75.27 ± 21.07 | <0.001 |
| Total number of bacteria (x 105/mL) | 124 ± 126 | 122 ± 166 | 126 ± 95 | 0.2 |
Clinical characteristics (mean ± standard deviation) of adolescents with LSG and HSG.
| Clinical characteristics | LSG (n = 2537) | HSG (n = 175) | % difference | Hypothesis testing (p, t) |
|---|---|---|---|---|
| Carious teeth (% decayed) | 5.43 ± 7.71 | 8.35 ± 8.55 | 53.9 | <0.001, -4.40 |
| Gingival redness (% red) | 72.55 ± 19.94 | 78.58 ± 19.45 | 8.3 | <0.001, -3.96 |
| Total number of bacteria (x 10−5/ml) | 123.97 ± 86.64 | 67.61 ± 52.39 | -45.5 | <0.001, 13.05 |
| Saliva flow rate (ml/h) | 25.83 ± 15.61 | 27.93 ± 16.79 | 8.2 | 0.1, -1.61 |
| BMI (kg/m2) | 21.12 ± 5.22 | 20.65 ± 5.45 | -2.2 | 0.3, 1.10 |
| Waist circumference ((cm) | 68.09 ± 21.56 | 67.06 ± 12.41 | -1.5 | 0.3, 1.00 |
| Fitness (beats/min) | 25.29 ± 19.17 | 25.61 ± 22.01 | 1.3 | 0.9, -0.19 |
| Sleep (hr) | 8.82 ± 1.60 | 9.09 ± 1.67 | 3 | 0.04, -2.06 |
| Diastolic blood pressure (mmHg) | 73.94 ± 13.25 | 75.00 ± 14.10 | 1.4 | 0.3, -0.97 |
| Systolic blood pressure (mmHg) | 109.10 ± 16.61 | 109.73 ± 18.36 | 0.6 | 0.7, -0.44 |
| Age (y) | 10.16 ± 0.66 | 9.89 ± 0.70 | -2.6 | <0.001, 4.89 |
Number of adolescents with HSG or LSG and high blood pressure and or obesity.
| Body weight & salivary glucose category | Normal BP | High BP | Total |
|---|---|---|---|
| Normal weight-HSG | 95 (54%) | 23 (13%) | 118 (67%) |
| Obese-HSG | 28 (16%) | 29 (17%) | 57 (33%) |
| Total-HSG | 123 (70%) | 52 (30%) | 175 (100%) |
| Normal weight-LSG | 1426 (56%) | 243 (10%) | 1669 (66%) |
| Obese-LSG | 522 (21%) | 346 (14%) | 868 (34%) |
| Total-LSG | 1948 (77%) | 589 (23%) | 2537 (100%) |
Median bacterial counts (number/mL x 10−5) in LSG and HSG conditions, sorted by univariate area under the curve (AUC).
Percent difference was computed as [100 x (HSG-LSG)/LSG] between the HSG group and the LSG group. Negative values represent a reduction in bacterial count. The random forest ROC area under the curve was 0.935. Source data is listed in S1 Table.
| Bacterial numbers (median x 105/ml) | |||||
|---|---|---|---|---|---|
| Bacteria | Random Forest Importance | Univariate AUC | Low salivary glucose (LSG) | High salivary glucose (HSG) | % difference |
| 81.3 | 0.83 | 8.25 | 1.78 | -78.5 | |
| 79.5 | 0.81 | 3.41 | 1.12 | -67.1 | |
| 90.7 | 0.81 | 1.66 | 0.37 | -77.5 | |
| 100.0 | 0.79 | 1.29 | 0.45 | -64.6 | |
| 34.9 | 0.78 | 0.44 | 0.08 | -82.5 | |
| 24.6 | 0.77 | 3.15 | 1.19 | -62.2 | |
| 38.3 | 0.76 | 1.68 | 0.68 | -59.5 | |
| 43.1 | 0.75 | 1.77 | 0.77 | -56.2 | |
| 12.7 | 0.75 | 3.51 | 1.62 | -53.8 | |
| 29.1 | 0.74 | 1.67 | 0.81 | -51.7 | |
| 11.8 | 0.74 | 6.30 | 2.57 | -59.2 | |
| 31.0 | 0.74 | 1.18 | 0.42 | -64.0 | |
| 16.4 | 0.73 | 6.56 | 2.73 | -58.4 | |
| 12.8 | 0.73 | 11.21 | 5.57 | -50.3 | |
| 15.2 | 0.73 | 1.86 | 1.14 | -38.9 | |
| 22.4 | 0.73 | 1.43 | 0.85 | -40.5 | |
| 5.4 | 0.72 | 1.35 | 0.81 | -39.9 | |
| 17.2 | 0.72 | 5.84 | 2.63 | -55.0 | |
| 23.4 | 0.71 | 1.58 | 1.01 | -35.9 | |
| 22.9 | 0.71 | 1.14 | 0.46 | -59.8 | |
| 27.0 | 0.71 | 1.44 | 0.80 | -44.7 | |
| 10.5 | 0.71 | 9.38 | 4.78 | -49.0 | |
| 6.4 | 0.70 | 0.57 | 0.21 | -63.1 | |
| 9.7 | 0.70 | 1.76 | 1.09 | -38.2 | |
| 59.7 | 0.69 | 1.88 | 0.88 | -53.1 | |
| 21.4 | 0.69 | 1.42 | 0.96 | -32.4 | |
| 14.0 | 0.69 | 1.13 | 0.57 | -49.9 | |
| 13.3 | 0.69 | 1.76 | 0.89 | -49.5 | |
| 26.1 | 0.68 | 1.40 | 0.98 | -29.8 | |
| 8.6 | 0.68 | 0.18 | 0.06 | -66.5 | |
| 9.6 | 0.64 | 0.35 | 0.20 | -43.0 | |
| 16.1 | 0.62 | 1.18 | 0.99 | -16.3 | |
| 24.7 | 0.61 | 1.31 | 1.02 | -22.2 | |
| 27.4 | 0.61 | 1.29 | 0.89 | -30.9 | |
| 11.5 | 0.59 | 2.07 | 1.56 | -24.5 | |
| 26.1 | 0.59 | 1.01 | 0.79 | -22.2 | |
| 30.9 | 0.58 | 0.31 | 0.19 | -39.6 | |
| 9.6 | 0.57 | 0.39 | 0.27 | -30.7 | |
| 23.4 | 0.56 | 1.68 | 1.28 | -23.9 | |
| 51.3 | 0.55 | 0.75 | 0.92 | 22.8 | |
| 35.3 | 0.54 | 0.25 | 0.20 | -21.2 | |
| 22.3 | 0.52 | 1.01 | 0.95 | -6.0 | |
| Age (y) | 13.2 | 0.62 | 10.1 | 9.7 | -4.0 |
| % of teeth with untreated decay | 0.8 | 0.61 | 3.8 | 7.1 | 86.8 |
| % of red gingival sites | 0.0 | 0.59 | 74.2 | 83.3 | 12.3 |
| Weekday sleep | 0.0 | 0.55 | 9 | 9 | 0.0 |
| BMI | 0.0 | 0.54 | 19.9 | 18.9 | -5.0 |
| Fitness | 0.0 | 0.50 | 24.5 | 24 | -2.0 |
*p<0.05
**p<0.001
Median salivary bacterial percentages under conditions of LSG and HSG sorted by univariate AUC.
Difference was computed as [(HSG-LSG)], such that negative values represent a reduction in percentage as salivary glucose increases. The random forest ROC area under the curve = 0.968. Source data is listed in S2 Table.
| Median Bacteria Percentage | |||||
|---|---|---|---|---|---|
| 53.8 | 0.80 | 7.51 | 3.71 | -3.80 | |
| 78.0 | 0.76 | 3.22 | 1.91 | -1.31 | |
| 68.5 | 0.76 | 1.55 | 0.75 | -0.80 | |
| 24.7 | 0.74 | 0.41 | 0.16 | -0.25 | |
| 52.0 | 0.68 | 1.19 | 0.79 | -0.40 | |
| 74.3 | 0.67 | 1.58 | 1.20 | -0.39 | |
| 16.6 | 0.65 | 1.07 | 0.74 | -0.32 | |
| 6.6 | 0.64 | 2.99 | 2.44 | -0.55 | |
| 14.6 | 0.61 | 1.61 | 1.30 | -0.31 | |
| 8.6 | 0.60 | 0.49 | 0.32 | -0.17 | |
| 8.5 | 0.60 | 3.40 | 3.01 | -0.39 | |
| 18.3 | 0.60 | 1.63 | 1.41 | -0.22 | |
| 4.5 | 0.58 | 0.16 | 0.12 | -0.04 | |
| 16.9 | 0.58 | 0.99 | 0.85 | -0.14 | |
| 6.5 | 0.57 | 6.14 | 5.30 | -0.84 | |
| 31.5 | 0.57 | 1.63 | 1.19 | -0.44 | |
| 2.9 | 0.56 | 1.28 | 1.13 | -0.15 | |
| 10.1 | 0.55 | 1.02 | 0.91 | -0.11 | |
| 6.3 | 0.55 | 1.88 | 1.78 | -0.11 | |
| 8.5 | 0.54 | 6.00 | 5.56 | -0.43 | |
| 8.0 | 0.53 | 5.37 | 5.33 | -0.04 | |
| 10.6 | 0.51 | 1.39 | 1.37 | -0.01 | |
| 29.7 | 0.51 | 0.28 | 0.27 | -0.01 | |
| 9.0 | 0.50 | 11.30 | 10.83 | -0.47 | |
| 100.0 | 0.82 | 0.73 | 1.51 | 0.78 | |
| 39.0 | 0.74 | 0.91 | 1.54 | 0.63 | |
| 58.9 | 0.73 | 1.63 | 2.52 | 0.89 | |
| 37.9 | 0.71 | 1.96 | 3.05 | 1.09 | |
| 55.8 | 0.64 | 1.20 | 1.64 | 0.44 | |
| 29.8 | 0.63 | 0.86 | 1.15 | 0.28 | |
| 41.4 | 0.61 | 1.20 | 1.48 | 0.28 | |
| 8.2 | 0.60 | 1.04 | 1.20 | 0.15 | |
| 17.9 | 0.59 | 0.36 | 0.52 | 0.16 | |
| 30.1 | 0.59 | 0.23 | 0.34 | 0.11 | |
| 6.6 | 0.58 | 1.34 | 1.55 | 0.21 | |
| 7.8 | 0.57 | 1.31 | 1.42 | 0.10 | |
| 14.7 | 0.56 | 1.67 | 1.89 | 0.22 | |
| 7.7 | 0.53 | 8.61 | 9.27 | 0.66 | |
| 5.9 | 0.52 | 1.63 | 1.72 | 0.10 | |
| 5.6 | 0.51 | 0.33 | 0.37 | 0.04 | |
| 18.7 | 0.51 | 1.33 | 1.40 | 0.07 | |
| 3.5 | 0.51 | 1.49 | 1.61 | 0.12 | |
| Age (y) | 13.4 | 0.62 | 10.1 | 9.7 | -4.0 |
| % of teeth with untreated decay | 1.2 | 0.61 | 3.8 | 7.1 | 86.8 |
| % of red gingival sites | 0.1 | 0.59 | 74.2 | 83.3 | 12.3 |
| Weekday sleep | 0.7 | 0.55 | 9 | 9 | 0.0 |
| BMI | 2.2 | 0.54 | 19.9 | 18.9 | -5.0 |
| Fitness | 0.0 | 0.50 | 24.5 | 24 | -2.0 |
*p<0.05
**p<0.001
Median phyla counts under conditions of LSG and HSG.
Data are sorted by % difference [100 x (HSG-LSG)/LSG] such that negative values represent a reduction under HSG conditions. The random forest ROC area under the curve for phyla = 0.868. Source data is listed in S1 Table.
| Bacteria Number (Median x 105/mL) | ||||||
|---|---|---|---|---|---|---|
| Phylum | Random forest Importance | Univariate AUC | Low salivary glucose (LSG) | High salivary glucose (HSG) | % Difference | Hypothesis testing (p,χ2) |
| 66.6 | 0.79 | 21.8 | 8.6 | -60.8 | <0.0001, 170 | |
| 100.0 | 0.77 | 10.3 | 4.2 | -59.0 | <0.0001, 135 | |
| 20.0 | 0.71 | 20.8 | 10.4 | -50.1 | <0.0001, 104 | |
| 37.0 | 0.69 | 42.5 | 22.6 | -46.8 | <0.0001, 89 | |
| 20.7 | 0.66 | 6.9 | 4.9 | -28.6 | <0.0001, 52 | |
| 49.0 | 0.53 | 0.7 | 0.6 | -7.7 | 0.3, 1.3 | |