Literature DB >> 28228526

Trimethylamine N-oxide stabilizes proteins via a distinct mechanism compared with betaine and glycine.

Yi-Ting Liao1, Anthony C Manson1, Michael R DeLyser1, William G Noid2, Paul S Cremer2,3.   

Abstract

We report experimental and computational studies investigating the effects of three osmolytes, trimethylamine N-oxide (TMAO), betaine, and glycine, on the hydrophobic collapse of an elastin-like polypeptide (ELP). All three osmolytes stabilize collapsed conformations of the ELP and reduce the lower critical solution temperature (LSCT) linearly with osmolyte concentration. As expected from conventional preferential solvation arguments, betaine and glycine both increase the surface tension at the air-water interface. TMAO, however, reduces the surface tension. Atomically detailed molecular dynamics (MD) simulations suggest that TMAO also slightly accumulates at the polymer-water interface, whereas glycine and betaine are strongly depleted. To investigate alternative mechanisms for osmolyte effects, we performed FTIR experiments that characterized the impact of each cosolvent on the bulk water structure. These experiments showed that TMAO red-shifts the OH stretch of the IR spectrum via a mechanism that was very sensitive to the protonation state of the NO moiety. Glycine also caused a red shift in the OH stretch region, whereas betaine minimally impacted this region. Thus, the effects of osmolytes on the OH spectrum appear uncorrelated with their effects upon hydrophobic collapse. Similarly, MD simulations suggested that TMAO disrupts the water structure to the least extent, whereas glycine exerts the greatest influence on the water structure. These results suggest that TMAO stabilizes collapsed conformations via a mechanism that is distinct from glycine and betaine. In particular, we propose that TMAO stabilizes proteins by acting as a surfactant for the heterogeneous surfaces of folded proteins.

Entities:  

Keywords:  MD simulations; mechanism; osmolytes; protein folding; spectroscopy

Mesh:

Substances:

Year:  2017        PMID: 28228526      PMCID: PMC5347566          DOI: 10.1073/pnas.1614609114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

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Authors:  Jagannath Mondal; Duncan Halverson; Isaac T S Li; Guillaume Stirnemann; Gilbert C Walker; Bruce J Berne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-13       Impact factor: 11.205

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Journal:  Bioinformatics       Date:  2013-02-13       Impact factor: 6.937

4.  When does trimethylamine N-oxide fold a polymer chain and urea unfold it?

Authors:  Jagannath Mondal; Guillaume Stirnemann; B J Berne
Journal:  J Phys Chem B       Date:  2013-07-10       Impact factor: 2.991

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6.  Structure and interaction in aqueous urea-trimethylamine-N-oxide solutions.

Authors:  Sandip Paul; Grenfell N Patey
Journal:  J Am Chem Soc       Date:  2007-03-21       Impact factor: 15.419

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Authors:  Ileana M Pazos; Feng Gai
Journal:  J Phys Chem B       Date:  2012-10-09       Impact factor: 2.991

8.  Preferential interactions between small solutes and the protein backbone: a computational analysis.

Authors:  Liang Ma; Laurel Pegram; M T Record; Qiang Cui
Journal:  Biochemistry       Date:  2010-03-09       Impact factor: 3.162

9.  Microscopic insights into the protein-stabilizing effect of trimethylamine N-oxide (TMAO).

Authors:  Jianqiang Ma; Ileana M Pazos; Feng Gai
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-27       Impact factor: 11.205

10.  Water structural transformation at molecular hydrophobic interfaces.

Authors:  Joel G Davis; Kamil P Gierszal; Ping Wang; Dor Ben-Amotz
Journal:  Nature       Date:  2012-11-22       Impact factor: 49.962

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2.  Cosolutes, Crowding, and Protein Folding Kinetics.

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Journal:  J Phys Chem B       Date:  2017-06-29       Impact factor: 2.991

3.  Quantitative Interpretation of Solvent Paramagnetic Relaxation for Probing Protein-Cosolute Interactions.

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4.  Preferential Binding of Urea to Single-Stranded DNA Structures: A Molecular Dynamics Study.

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Review 5.  TMA/TMAO in Hypertension: Novel Horizons and Potential Therapies.

Authors:  Wan-Qin Zhang; Yun-Jiao Wang; Ao Zhang; Yue-Jia Ding; Xiao-Nan Zhang; Qiu-Jin Jia; Ya-Ping Zhu; Yan-Yang Li; Shi-Chao Lv; Jun-Ping Zhang
Journal:  J Cardiovasc Transl Res       Date:  2021-03-11       Impact factor: 4.132

6.  The gut metabolite, trimethylamine N-oxide inhibits protein folding by affecting cis-trans isomerization and induces cell cycle arrest.

Authors:  Kritika Kumari; Marina Warepam; Aniket Kumar Bansal; Tanveer Ali Dar; Vladimir N Uversky; Laishram Rajendrakumar Singh
Journal:  Cell Mol Life Sci       Date:  2021-12-25       Impact factor: 9.261

7.  Small Molecules Modulate Liquid-to-Solid Transitions in Phase-Separated Tau Condensates.

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8.  Trimethylamine N-oxide abolishes the chaperone activity of α-casein: an intrinsically disordered protein.

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9.  Trimethylamine N-oxide-derived zwitterionic polymers: A new class of ultralow fouling bioinspired materials.

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Journal:  Sci Adv       Date:  2019-06-14       Impact factor: 14.136

10.  Dynamical Model for the Counteracting Effects of Trimethylamine N-Oxide on Urea in Aqueous Solutions under Pressure.

Authors:  Xiaojing Teng; Toshiko Ichiye
Journal:  J Phys Chem B       Date:  2020-02-27       Impact factor: 2.991

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