Literature DB >> 28195477

Enzymatic N- and C-Protection in Cyanobactin RiPP Natural Products.

Debosmita Sardar1, Yue Hao2, Zhenjian Lin1, Maho Morita1, Satish K Nair2, Eric W Schmidt1.   

Abstract

Recent innovations in peptide natural product biosynthesis reveal a surprising wealth of previously uncharacterized biochemical reactions that have potential applications in synthetic biology. Among these, the cyanobactins are noteworthy because these peptides are protected at their N- and C-termini by macrocyclization. Here, we use a novel bifunctional enzyme AgeMTPT to protect linear peptides by attaching prenyl and methyl groups at their free N- and C-termini. Using this peptide protectase in combination with other modular biosynthetic enzymes, we describe the total synthesis of the natural product aeruginosamide B and the biosynthesis of linear cyanobactin natural products. Our studies help to define the enzymatic mechanism of macrocyclization, providing evidence against the water exclusion hypothesis of transpeptidation and favoring the kinetic lability hypothesis.

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Year:  2017        PMID: 28195477      PMCID: PMC5764894          DOI: 10.1021/jacs.6b12872

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  31 in total

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4.  Structures of cyanobactin maturation enzymes define a family of transamidating proteases.

Authors:  Vinayak Agarwal; Elizabeth Pierce; John McIntosh; Eric W Schmidt; Satish K Nair
Journal:  Chem Biol       Date:  2012-11-21

5.  Enzymatic basis of ribosomal peptide prenylation in cyanobacteria.

Authors:  John A McIntosh; Mohamed S Donia; Satish K Nair; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2011-08-04       Impact factor: 15.419

6.  Modularity of RiPP Enzymes Enables Designed Synthesis of Decorated Peptides.

Authors:  Debosmita Sardar; Zhenjian Lin; Eric W Schmidt
Journal:  Chem Biol       Date:  2015-07-09

Review 7.  Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature.

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9.  Structural analysis of leader peptide binding enables leader-free cyanobactin processing.

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Journal:  Nat Chem Biol       Date:  2015-06-22       Impact factor: 15.040

10.  Recognition sequences and substrate evolution in cyanobactin biosynthesis.

Authors:  Debosmita Sardar; Elizabeth Pierce; John A McIntosh; Eric W Schmidt
Journal:  ACS Synth Biol       Date:  2014-03-26       Impact factor: 5.110

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  20 in total

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2.  Post-Translational Tyrosine Geranylation in Cyanobactin Biosynthesis.

Authors:  Maho Morita; Yue Hao; Jouni K Jokela; Debosmita Sardar; Zhenjian Lin; Kaarina Sivonen; Satish K Nair; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2018-05-01       Impact factor: 15.419

3.  Characterization of a Dehydratase and Methyltransferase in the Biosynthesis of Ribosomally Synthesized and Post-translationally Modified Peptides in Lachnospiraceae.

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Review 6.  Parallel lives of symbionts and hosts: chemical mutualism in marine animals.

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Review 7.  Recent advances in the biosynthesis of RiPPs from multicore-containing precursor peptides.

Authors:  Garret M Rubin; Yousong Ding
Journal:  J Ind Microbiol Biotechnol       Date:  2020-07-02       Impact factor: 3.346

Review 8.  Biosynthetic Proteases That Catalyze the Macrocyclization of Ribosomally Synthesized Linear Peptides.

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9.  Three Principles of Diversity-Generating Biosynthesis.

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Review 10.  The Biochemistry and Structural Biology of Cyanobactin Pathways: Enabling Combinatorial Biosynthesis.

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Journal:  Methods Enzymol       Date:  2018-05-04       Impact factor: 1.600

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