Literature DB >> 32457155

Algal neurotoxin biosynthesis repurposes the terpene cyclase structural fold into an N-prenyltransferase.

Jonathan R Chekan1, Shaun M K McKinnie2, Joseph P Noel3, Bradley S Moore4,5.   

Abstract

Prenylation is a common biological reaction in all domains of life wherein prenyl diphosphate donors transfer prenyl groups onto small molecules as well as large proteins. The enzymes that catalyze these reactions are structurally distinct from ubiquitous terpene cyclases that, instead, assemble terpenes via intramolecular rearrangements of a single substrate. Herein, we report the structure and molecular details of a new family of prenyltransferases from marine algae that repurposes the terpene cyclase structural fold for the N-prenylation of glutamic acid during the biosynthesis of the potent neurochemicals domoic acid and kainic acid. We solved the X-ray crystal structure of the prenyltransferase found in domoic acid biosynthesis, DabA, and show distinct active site binding modifications that remodel the canonical magnesium (Mg2+)-binding motif found in terpene cyclases. We then applied our structural knowledge of DabA and a homologous enzyme from the kainic acid biosynthetic pathway, KabA, to reengineer their isoprene donor specificities (geranyl diphosphate [GPP] versus dimethylallyl diphosphate [DMAPP]) with a single amino acid change. While diatom DabA and seaweed KabA enzymes share a common evolutionary lineage, they are distinct from all other terpene cyclases, suggesting a very distant ancestor to the larger terpene synthase family.

Entities:  

Keywords:  X-ray crystallography; domoic acid; natural products; prenyltransferase; terpene cyclase

Year:  2020        PMID: 32457155      PMCID: PMC7293706          DOI: 10.1073/pnas.2001325117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

Review 1.  Structure, mechanism and function of prenyltransferases.

Authors:  Po-Huang Liang; Tzu-Ping Ko; Andrew H-J Wang
Journal:  Eur J Biochem       Date:  2002-07

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Authors:  Donald M Anderson; Allan D Cembella; Gustaaf M Hallegraeff
Journal:  Ann Rev Mar Sci       Date:  2012

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4.  Biosynthesis of the neurotoxin domoic acid in a bloom-forming diatom.

Authors:  John K Brunson; Shaun M K McKinnie; Jonathan R Chekan; John P McCrow; Zachary D Miles; Erin M Bertrand; Vincent A Bielinski; Hanna Luhavaya; Miroslav Oborník; G Jason Smith; David A Hutchins; Andrew E Allen; Bradley S Moore
Journal:  Science       Date:  2018-09-28       Impact factor: 47.728

Review 5.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

Review 6.  Mechanisms and Effects Posed by Neurotoxic Products of Cyanobacteria/Microbial Eukaryotes/Dinoflagellates in Algae Blooms: a Review.

Authors:  Fiona D Mello; Nady Braidy; Helder Marçal; Gilles Guillemin; Seyed Mohammad Nabavi; Brett A Neilan
Journal:  Neurotox Res       Date:  2017-08-23       Impact factor: 3.911

7.  The structure of dimethylallyl tryptophan synthase reveals a common architecture of aromatic prenyltransferases in fungi and bacteria.

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8.  Harmful Algal Blooms and Public Health.

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Authors:  Masahiro Fujihashi; Tsutomu Sato; Yuma Tanaka; Daisuke Yamamoto; Tomoyuki Nishi; Daijiro Ueda; Mizuki Murakami; Yoko Yasuno; Ai Sekihara; Kazuma Fuku; Tetsuro Shinada; Kunio Miki
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5.  Toxicity of the Diatom Genus Pseudo-nitzschia (Bacillariophyceae): Insights from Toxicity Tests and Genetic Screening in the Northern Adriatic Sea.

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6.  Domoic acid biosynthesis in the red alga Chondria armata suggests a complex evolutionary history for toxin production.

Authors:  Taylor S Steele; John K Brunson; Yukari Maeno; Ryuta Terada; Andrew E Allen; Mari Yotsu-Yamashita; Jonathan R Chekan; Bradley S Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-08       Impact factor: 12.779

Review 7.  Alternative metabolic pathways and strategies to high-titre terpenoid production in Escherichia coli.

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