Literature DB >> 28155198

Validation of New Signal Detection Methods for Web Query Log Data Compared to Signal Detection Algorithms Used With FAERS.

Susan Colilla1, Elad Yom Tov2, Ling Zhang3, Marie-Laure Kurzinger4, Stephanie Tcherny-Lessenot4, Catherine Penfornis4, Shang Jen5, Danny S Gonzalez6, Patrick Caubel7, Susan Welsh3, Juhaeri Juhaeri3.   

Abstract

INTRODUCTION: Post-marketing drug surveillance is largely based on signals found in spontaneous reports from patients and healthcare providers. Rare adverse drug reactions and adverse events (AEs) that may develop after long-term exposure to a drug or from drug interactions may be missed. The US FDA and others have proposed that web-based data could be mined as a resource to detect latent signals associated with adverse drug reactions.
METHODS: Recently, a web-based search query method called a query log reaction score (QLRS) was developed to detect whether AEs associated with certain drugs could be found from search engine query data. In this study, we compare the performance of two other algorithms, the proportional query ratio (PQR) and the proportional query rate ratio (Q-PRR) against that of two reference signal-detection algorithms (SDAs) commonly used with the FDA AE Reporting System (FAERS) database.
RESULTS: In summary, the web query methods have moderate sensitivity (80%) in detecting signals in web query data compared with reference SDAs in FAERS when the web query data are filtered, but the query metrics generate many false-positives and have low specificity compared with reference SDAs in FAERS.
CONCLUSION: Future research is needed to find better refinements of query data and/or the metrics to improve the specificity of these web query log algorithms.

Entities:  

Mesh:

Year:  2017        PMID: 28155198     DOI: 10.1007/s40264-017-0507-4

Source DB:  PubMed          Journal:  Drug Saf        ISSN: 0114-5916            Impact factor:   5.606


  19 in total

1.  An appraisal of spontaneous adverse event monitoring.

Authors:  A P Fletcher
Journal:  Adverse Drug React Toxicol Rev       Date:  1992

2.  Social Media Listening for Routine Post-Marketing Safety Surveillance.

Authors:  Gregory E Powell; Harry A Seifert; Tjark Reblin; Phil J Burstein; James Blowers; J Alan Menius; Jeffery L Painter; Michele Thomas; Carrie E Pierce; Harold W Rodriguez; John S Brownstein; Clark C Freifeld; Heidi G Bell; Nabarun Dasgupta
Journal:  Drug Saf       Date:  2016-05       Impact factor: 5.606

3.  Text mining for adverse drug events: the promise, challenges, and state of the art.

Authors:  Rave Harpaz; Alison Callahan; Suzanne Tamang; Yen Low; David Odgers; Sam Finlayson; Kenneth Jung; Paea LePendu; Nigam H Shah
Journal:  Drug Saf       Date:  2014-10       Impact factor: 5.606

Review 4.  Utilizing social media data for pharmacovigilance: A review.

Authors:  Abeed Sarker; Rachel Ginn; Azadeh Nikfarjam; Karen O'Connor; Karen Smith; Swetha Jayaraman; Tejaswi Upadhaya; Graciela Gonzalez
Journal:  J Biomed Inform       Date:  2015-02-23       Impact factor: 6.317

5.  Comparative performance of two quantitative safety signalling methods: implications for use in a pharmacovigilance department.

Authors:  June S Almenoff; Karol K LaCroix; Nancy A Yuen; David Fram; William DuMouchel
Journal:  Drug Saf       Date:  2006       Impact factor: 5.606

6.  Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions.

Authors:  Rave Harpaz; Santiago Vilar; William Dumouchel; Hojjat Salmasian; Krystl Haerian; Nigam H Shah; Herbert S Chase; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2012-10-31       Impact factor: 4.497

7.  Analyzing search behavior of healthcare professionals for drug safety surveillance.

Authors:  David J Odgers; Rave Harpaz; Alison Callahan; Gregor Stiglic; Nigam H Shah
Journal:  Pac Symp Biocomput       Date:  2015

8.  Performance of pharmacovigilance signal-detection algorithms for the FDA adverse event reporting system.

Authors:  R Harpaz; W DuMouchel; P LePendu; A Bauer-Mehren; P Ryan; N H Shah
Journal:  Clin Pharmacol Ther       Date:  2013-02-11       Impact factor: 6.875

Review 9.  Social media and pharmacovigilance: A review of the opportunities and challenges.

Authors:  Richard Sloane; Orod Osanlou; David Lewis; Danushka Bollegala; Simon Maskell; Munir Pirmohamed
Journal:  Br J Clin Pharmacol       Date:  2015-09-02       Impact factor: 4.335

10.  Toward enhanced pharmacovigilance using patient-generated data on the internet.

Authors:  R W White; R Harpaz; N H Shah; W DuMouchel; E Horvitz
Journal:  Clin Pharmacol Ther       Date:  2014-04-08       Impact factor: 6.875

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  4 in total

1.  Hypothesis-free signal detection in healthcare databases: finding its value for pharmacovigilance.

Authors:  Andrew Bate; Ken Hornbuckle; Juhaeri Juhaeri; Stephen P Motsko; Robert F Reynolds
Journal:  Ther Adv Drug Saf       Date:  2019-08-05

2.  A New Method to Extract Health-Related Quality of Life Data From Social Media Testimonies: Algorithm Development and Validation.

Authors:  Simon Renner; Tom Marty; Mickaïl Khadhar; Pierre Foulquié; Paméla Voillot; Adel Mebarki; Ilaria Montagni; Nathalie Texier; Stéphane Schück
Journal:  J Med Internet Res       Date:  2022-01-28       Impact factor: 5.428

3.  Adverse Reactions Associated With Cannabis Consumption as Evident From Search Engine Queries.

Authors:  Elad Yom-Tov; Shaul Lev-Ran
Journal:  JMIR Public Health Surveill       Date:  2017-10-26

4.  Web-Based Signal Detection Using Medical Forums Data in France: Comparative Analysis.

Authors:  Marie-Laure Kürzinger; Stéphane Schück; Nathalie Texier; Redhouane Abdellaoui; Carole Faviez; Julie Pouget; Ling Zhang; Stéphanie Tcherny-Lessenot; Stephen Lin; Juhaeri Juhaeri
Journal:  J Med Internet Res       Date:  2018-11-20       Impact factor: 5.428

  4 in total

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