Literature DB >> 25592591

Analyzing search behavior of healthcare professionals for drug safety surveillance.

David J Odgers1, Rave Harpaz, Alison Callahan, Gregor Stiglic, Nigam H Shah.   

Abstract

Post-market drug safety surveillance is hugely important and is a significant challenge despite the existence of adverse event (AE) reporting systems. Here we describe a preliminary analysis of search logs from healthcare professionals as a source for detecting adverse drug events. We annotate search log query terms with biomedical terminologies for drugs and events, and then perform a statistical analysis to identify associations among drugs and events within search sessions. We evaluate our approach using two different types of reference standards consisting of known adverse drug events (ADEs) and negative controls. Our approach achieves a discrimination accuracy of 0.85 in terms of the area under the receiver operator curve (AUC) for the reference set of well-established ADEs and an AUC of 0.68 for the reference set of recently labeled ADEs. We also find that the majority of associations in the reference sets have support in the search log data. Despite these promising results additional research is required to better understand users' search behavior, biasing factors, and the overall utility of analyzing healthcare professional search logs for drug safety surveillance.

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Mesh:

Year:  2015        PMID: 25592591      PMCID: PMC4299876     

Source DB:  PubMed          Journal:  Pac Symp Biocomput        ISSN: 2335-6928


  29 in total

1.  Electronic healthcare databases for active drug safety surveillance: is there enough leverage?

Authors:  Preciosa M Coloma; Gianluca Trifirò; Martijn J Schuemie; Rosa Gini; Ron Herings; Julia Hippisley-Cox; Giampiero Mazzaglia; Gino Picelli; Giovanni Corrao; Lars Pedersen; Johan van der Lei; Miriam Sturkenboom
Journal:  Pharmacoepidemiol Drug Saf       Date:  2012-02-08       Impact factor: 2.890

2.  Managing drug-risk information--what to do with all those new numbers.

Authors:  Jerry Avorn; Sebastian Schneeweiss
Journal:  N Engl J Med       Date:  2009-07-27       Impact factor: 91.245

3.  Using information mining of the medical literature to improve drug safety.

Authors:  Kanaka D Shetty; Siddhartha R Dalal
Journal:  J Am Med Inform Assoc       Date:  2011-05-05       Impact factor: 4.497

4.  Design and validation of an automated method to detect known adverse drug reactions in MEDLINE: a contribution from the EU-ADR project.

Authors:  Paul Avillach; Jean-Charles Dufour; Gayo Diallo; Francesco Salvo; Michel Joubert; Frantz Thiessard; Fleur Mougin; Gianluca Trifirò; Annie Fourrier-Réglat; Antoine Pariente; Marius Fieschi
Journal:  J Am Med Inform Assoc       Date:  2012-11-29       Impact factor: 4.497

5.  Web-scale pharmacovigilance: listening to signals from the crowd.

Authors:  Ryen W White; Nicholas P Tatonetti; Nigam H Shah; Russ B Altman; Eric Horvitz
Journal:  J Am Med Inform Assoc       Date:  2013-03-06       Impact factor: 4.497

6.  Mining clinical text for signals of adverse drug-drug interactions.

Authors:  Srinivasan V Iyer; Rave Harpaz; Paea LePendu; Anna Bauer-Mehren; Nigam H Shah
Journal:  J Am Med Inform Assoc       Date:  2013-10-24       Impact factor: 4.497

7.  Performance of pharmacovigilance signal-detection algorithms for the FDA adverse event reporting system.

Authors:  R Harpaz; W DuMouchel; P LePendu; A Bauer-Mehren; P Ryan; N H Shah
Journal:  Clin Pharmacol Ther       Date:  2013-02-11       Impact factor: 6.875

8.  A reference standard for evaluation of methods for drug safety signal detection using electronic healthcare record databases.

Authors:  Preciosa M Coloma; Paul Avillach; Francesco Salvo; Martijn J Schuemie; Carmen Ferrajolo; Antoine Pariente; Annie Fourrier-Réglat; Mariam Molokhia; Vaishali Patadia; Johan van der Lei; Miriam Sturkenboom; Gianluca Trifirò
Journal:  Drug Saf       Date:  2013-01       Impact factor: 5.606

9.  Postmarket drug surveillance without trial costs: discovery of adverse drug reactions through large-scale analysis of web search queries.

Authors:  Elad Yom-Tov; Evgeniy Gabrilovich
Journal:  J Med Internet Res       Date:  2013-06-18       Impact factor: 5.428

10.  Toward enhanced pharmacovigilance using patient-generated data on the internet.

Authors:  R W White; R Harpaz; N H Shah; W DuMouchel; E Horvitz
Journal:  Clin Pharmacol Ther       Date:  2014-04-08       Impact factor: 6.875

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  6 in total

Review 1.  Crowdsourcing in biomedicine: challenges and opportunities.

Authors:  Ritu Khare; Benjamin M Good; Robert Leaman; Andrew I Su; Zhiyong Lu
Journal:  Brief Bioinform       Date:  2015-04-17       Impact factor: 11.622

2.  Validation of New Signal Detection Methods for Web Query Log Data Compared to Signal Detection Algorithms Used With FAERS.

Authors:  Susan Colilla; Elad Yom Tov; Ling Zhang; Marie-Laure Kurzinger; Stephanie Tcherny-Lessenot; Catherine Penfornis; Shang Jen; Danny S Gonzalez; Patrick Caubel; Susan Welsh; Juhaeri Juhaeri
Journal:  Drug Saf       Date:  2017-05       Impact factor: 5.606

3.  Correlation Between UpToDate Searches and Reported Cases of Middle East Respiratory Syndrome During Outbreaks in Saudi Arabia.

Authors:  Anna R Thorner; Bin Cao; Terrence Jiang; Amy J Warner; Peter A Bonis
Journal:  Open Forum Infect Dis       Date:  2016-02-18       Impact factor: 3.835

4.  Analyzing Information Seeking and Drug-Safety Alert Response by Health Care Professionals as New Methods for Surveillance.

Authors:  Alison Callahan; Igor Pernek; Gregor Stiglic; Jure Leskovec; Howard R Strasberg; Nigam Haresh Shah
Journal:  J Med Internet Res       Date:  2015-08-20       Impact factor: 5.428

5.  Online searches of children's oseltamivir in public primary and specialized care: Detecting influenza outbreaks in Finland using dedicated databases for health care professionals.

Authors:  Milla Mukka; Samuli Pesälä; Aapo Juutinen; Mikko J Virtanen; Pekka Mustonen; Minna Kaila; Otto Helve
Journal:  PLoS One       Date:  2022-08-05       Impact factor: 3.752

6.  A curated and standardized adverse drug event resource to accelerate drug safety research.

Authors:  Juan M Banda; Lee Evans; Rami S Vanguri; Nicholas P Tatonetti; Patrick B Ryan; Nigam H Shah
Journal:  Sci Data       Date:  2016-05-10       Impact factor: 6.444

  6 in total

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