Literature DB >> 28101418

Multi-surface segmentation of OCT images with AMD using sparse high order potentials.

Jorge Oliveira1, Sérgio Pereira2, Luís Gonçalves3, Manuel Ferreira4, Carlos A Silva2.   

Abstract

In age-related macular degeneration (AMD), the quantification of drusen is important because it is correlated with the evolution of the disease to an advanced stage. Therefore, we propose an algorithm based on a multi-surface framework for the segmentation of the limiting boundaries of drusen: the inner boundary of the retinal pigment epithelium + drusen complex (IRPEDC) and the Bruch's membrane (BM). Several segmentation methods have been considerably successful in segmenting retinal layers of healthy retinas in optical coherence tomography (OCT) images. These methods are successful because they incorporate prior information and regularization. Nonetheless, these factors tend to hinder the segmentation for diseased retinas. The proposed algorithm takes into account the presence of drusen and geographic atrophy (GA) related to AMD by excluding prior information and regularization just valid for healthy regions. However, even with this algorithm, prior information and regularization still cause the oversmoothing of drusen in some locations. Thus, we propose the integration of local shape prior in the form of a sparse high order potentials (SHOPs) into the algorithm to reduce the oversmoothing of drusen. The proposed algorithm was evaluated in a public database. The mean unsigned errors, relative to the average of two experts, for the inner limiting membrane (ILM), IRPEDC and BM were 2.94±2.69, 5.53±5.66 and 4.00±4.00 µm, respectively. Drusen areas measurements were evaluated, relative to the average of two expert graders, by the mean absolute area difference and overlap ratio, which were 1579.7 ± 2106.8 µm2 and 0.78 ± 0.11, respectively.

Entities:  

Keywords:  (100.0100) Image processing; (170.4470) Ophthalmology; (170.4500) Optical coherence tomography

Year:  2016        PMID: 28101418      PMCID: PMC5231299          DOI: 10.1364/BOE.8.000281

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  19 in total

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Authors:  Stephanie J Chiu; Joseph A Izatt; Rachelle V O'Connell; Katrina P Winter; Cynthia A Toth; Sina Farsiu
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3.  Performance of drusen detection by spectral-domain optical coherence tomography.

Authors:  Ferdinand G Schlanitz; Christian Ahlers; Stefan Sacu; Christopher Schütze; Marcos Rodriguez; Sabine Schriefl; Isabelle Golbaz; Tobias Spalek; Geraldine Stock; Ursula Schmidt-Erfurth
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4.  Change in drusen area over time compared using spectral-domain optical coherence tomography and color fundus imaging.

Authors:  Giovanni Gregori; Zohar Yehoshua; Carlos Alexandre de Amorim Garcia Filho; SriniVas R Sadda; Renata Portella Nunes; William J Feuer; Philip J Rosenfeld
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5.  Automated drusen segmentation and quantification in SD-OCT images.

Authors:  Qiang Chen; Theodore Leng; Luoluo Zheng; Lauren Kutzscher; Jeffrey Ma; Luis de Sisternes; Daniel L Rubin
Journal:  Med Image Anal       Date:  2013-07-02       Impact factor: 8.545

6.  Automatic segmentation of up to ten layer boundaries in SD-OCT images of the mouse retina with and without missing layers due to pathology.

Authors:  Pratul P Srinivasan; Stephanie J Heflin; Joseph A Izatt; Vadim Y Arshavsky; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2014-01-07       Impact factor: 3.732

7.  Photoreceptor layer thinning over drusen in eyes with age-related macular degeneration imaged in vivo with spectral-domain optical coherence tomography.

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8.  Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation.

Authors:  Stephanie J Chiu; Xiao T Li; Peter Nicholas; Cynthia A Toth; Joseph A Izatt; Sina Farsiu
Journal:  Opt Express       Date:  2010-08-30       Impact factor: 3.894

9.  Retinal Nerve Fiber Layer Segmentation on FD-OCT Scans of Normal Subjects and Glaucoma Patients.

Authors:  Markus A Mayer; Joachim Hornegger; Christian Y Mardin; Ralf P Tornow
Journal:  Biomed Opt Express       Date:  2010-11-08       Impact factor: 3.732

10.  Spectral domain optical coherence tomography for quantitative evaluation of drusen and associated structural changes in non-neovascular age-related macular degeneration.

Authors:  K Yi; M Mujat; B H Park; W Sun; J W Miller; J M Seddon; L H Young; J F de Boer; T C Chen
Journal:  Br J Ophthalmol       Date:  2008-08-12       Impact factor: 4.638

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  8 in total

1.  Robust total retina thickness segmentation in optical coherence tomography images using convolutional neural networks.

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Journal:  Biomed Opt Express       Date:  2017-06-16       Impact factor: 3.732

2.  Multi-surface segmentation of OCT images with AMD using sparse high order potentials.

Authors:  Jorge Oliveira; Sérgio Pereira; Luís Gonçalves; Manuel Ferreira; Carlos A Silva
Journal:  Biomed Opt Express       Date:  2016-12-16       Impact factor: 3.732

3.  Automatic segmentation of nine retinal layer boundaries in OCT images of non-exudative AMD patients using deep learning and graph search.

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4.  Automatic segmentation of OCT retinal boundaries using recurrent neural networks and graph search.

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5.  Deep OCT image compression with convolutional neural networks.

Authors:  Pengfei Guo; Dawei Li; Xingde Li
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Review 6.  Approaches to quantify optical coherence tomography angiography metrics.

Authors:  Bingyao Tan; Ralene Sim; Jacqueline Chua; Damon W K Wong; Xinwen Yao; Gerhard Garhöfer; Doreen Schmidl; René M Werkmeister; Leopold Schmetterer
Journal:  Ann Transl Med       Date:  2020-09

7.  Choroid Segmentation of Retinal OCT Images Based on CNN Classifier and l 2-l q Fitter.

Authors:  Fang He; Rachel Ka Man Chun; Zicheng Qiu; Shijie Yu; Yun Shi; Chi Ho To; Xiaojun Chen
Journal:  Comput Math Methods Med       Date:  2021-01-15       Impact factor: 2.238

8.  A comparison of deep learning U-Net architectures for posterior segment OCT retinal layer segmentation.

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Journal:  Sci Rep       Date:  2022-09-01       Impact factor: 4.996

  8 in total

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