| Literature DB >> 28070019 |
Yongsheng Huang1, Wenting Wu2, Meng Nie1, Chuang Li1, Lin Wang1.
Abstract
Mothers against decapentaplegic homolog 7 (SMAD7) inhibits the transforming growth factor-β (TGF-β) signaling pathway, which regulates carcinogenesis and cancer progression. A number of studies have reported that SMAD7 polymorphisms (rs4464148, rs4939827, and rs12953717) are associated with colorectal cancer (CRC) risk, but the results from these studies remain conflicting. To determine a more precise estimation of the relationship between SMAD7 and CRC, we undertook a large-scale meta-analysis of 63 studies, which included a total of 187,181 subjects (86,585 cases and 100,596 controls). The results of our meta-analysis revealed that the C allele of rs4464148 [CC vs. TT+TC, odds ratio (OR) =1.23, 95% confidence interval (CI): 1.14-1.33, P < 0.01], the T allele of rs4939827 [TT vs. CC+TC, odds ratio OR=1.15, 95%CI:1.07-1.22, P < 0.01] and the T allele of rs12953717 [TT vs. CC+TC, OR =1.22, 95%CI:1.16-1.29, P < 0.01] were all associated with the increased CRC risk. Subgroup analysis according to ethnicity showed rs4464148 and rs12953717 were associated with the risk of CRC in both Caucasians and Asians, whereas rs4939827 was a risk polymorphism for CRC specifically in Caucasians. In summary, this large-scale meta-analysis indicated that SMAD7 polymorphisms (rs4464148, rs4939827, and rs12953717) correlate with CRC.Entities:
Keywords: SMAD7; colorectal cancer; meta-analysis; polymorphism
Mesh:
Substances:
Year: 2016 PMID: 28070019 PMCID: PMC5342761 DOI: 10.18632/oncotarget.12285
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flowchart of the literature selection process
Main characteristics of all case-control studies included in the meta-analysis
| SNP | Author | Year | Ethnicity | Cancer type | Case | Control | HWE (Control | Study design | Genotyping method | Quality assessment | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Broderick et al. [ | 2007 | Caucasian | Colon | 389 | 425 | 116 | 486 | 394 | 80 | 0.991 | GWAS | Illumina | 8 | |
| -B group | 2007 | Caucasian | Colon | 2017 | 1952 | 472 | 1886 | 1617 | 346 | 0.982 | Replication | Allele-PCR | 8 | |
| -C group | 2007 | Caucasian | Colon | 922 | 845 | 193 | 827 | 696 | 146 | 0.980 | Replication | Allele-PCR | 8 | |
| -D group | 2007 | Caucasian | Colon | 422 | 408 | 99 | 171 | 137 | 27 | 0.952 | Replication | Allele-PCR | 8 | |
| Thompson et al. [ | 2009 | Caucasian | Colon | 269 | 231 | 61 | 342 | 324 | 53 | 0.045 | Replication | TaqMan | 8 | |
| Curtin et al. [ | 2009 | Caucasian | Colon | 503 | 472 | 95 | 535 | 423 | 89 | 0.678 | Replication | SNPlex | 8 | |
| Pittman et al. [ | 2009 | Caucasian | Colon | 1161 | 1107 | 264 | 1095 | 1277 | 235 | 0.996 | Replication | Allele-PCR | 8 | |
| Ho et al. [ | 2011 | Asian | Colon | 739 | 146 | 7 | 770 | 116 | 4 | 0.869 | Replication | Sequenom | 7 | |
| Zhang et al. [ | 2014 | Asian | Colon | 1 | 52 | 675 | 14 | 305 | 2957 | 0.999 | Replication | TaqMan | 8 | |
| Kurlapska et al. [ | 2014 | Caucasian | Colon | 1214 | 1228 | 400 | 84 | 96 | 33 | 0.523 | Replication | Sequenom | 7 | |
| Damavand et al. [ | 2015 | Caucasian | Colon | 138 | 78 | 37 | 113 | 101 | 20 | 0.700 | Replication | Taqman | 7 | |
| Serrano-Fernandez et al. [ | 2015 | Caucasian | Colon | 507 | 517 | 141 | 561 | 490 | 114 | 0.643 | Replication | Taqman | 8 | |
| Broderick et al. [ | 2007 | Caucasian | Colon | 153 | 449 | 328 | 229 | 480 | 251 | 0.987 | GWAS | Illumina | 8 | |
| -B group | 2007 | Caucasian | Colon | 852 | 2178 | 1392 | 845 | 1915 | 1084 | 0.989 | Replication | Allele-PCR | 8 | |
| -C group | 2007 | Caucasian | Colon | 387 | 982 | 623 | 410 | 840 | 430 | 0.995 | Replication | Allele-PCR | 8 | |
| -D group | 2007 | Caucasian | Colon | 194 | 477 | 292 | 76 | 171 | 96 | 0.923 | Replication | Allele-PCR | 8 | |
| Tenesa et al. [ | 2008 | Caucasian | Colon | 538 | 1521 | 926 | 706 | 1508 | 845 | 0.506 | GWAS | Illumina | 8 | |
| -Japan | 2008 | Asian | Colon | 233 | 1582 | 2576 | 131 | 1028 | 2019 | 0.992 | Replication | TaqMan | 8 | |
| -Canada | 2008 | Caucasian | Colon | 225 | 593 | 355 | 284 | 576 | 322 | 0.402 | Replication | TaqMan | 8 | |
| -England | 2008 | Caucasian | Colon | 418 | 1120 | 694 | 546 | 1126 | 578 | 0.959 | Replication | TaqMan | 8 | |
| -Spain | 2008 | Caucasian | Colon | 62 | 156 | 131 | 57 | 143 | 95 | 0,808 | Replication | TaqMan | 8 | |
| -Germany | 2008 | Caucasian | Colon | 420 | 1071 | 659 | 541 | 1057 | 530 | 0.765 | Replication | TaqMan- | 8 | |
| -Germany | 2008 | Caucasian | Colon | 289 | 617 | 412 | 378 | 704 | 358 | 0.403 | Replication | TaqMan | 8 | |
| -Scotland | 2008 | Caucasian | Colon | 156 | 420 | 254 | 189 | 446 | 288 | 0.497 | Replication | TaqMan | 8 | |
| -Israel | 2008 | Caucasian | Colon | 267 | 638 | 447 | 312 | 627 | 397 | 0.035 | Replication | TaqMan | 8 | |
| Curtin et al. [ | 2009 | Caucasian | Colon | 221 | 520 | 324 | 229 | 538 | 274 | 0.251 | Replication | SNPlex | 8 | |
| Thompson et al. [ | 2009 | Caucasian | Colon | 125 | 275 | 154 | 146 | 378 | 185 | 0.064 | Replication | TaqMan | 8 | |
| Pittman et al. [ | 2009 | Caucasian | Colon | 785 | 1250 | 497 | 725 | 1300 | 582 | 0.987 | Replication | Allele-PCR | 8 | |
| Slattery et al. [ | 2010 | Caucasian | Colon | 360 | 773 | 457 | 492 | 992 | 503 | 0.947 | Replication | TaqMan | 8 | |
| Xiong et al. [ | 2010 | Asian | Colon | 1370 | 677 | 77 | 1442 | 570 | 74 | 0.061 | Replication | T-ARMS-PCR | 8 | |
| von Hoslt et al. [ | 2010 | Caucasian | Colon | 395 | 886 | 501 | 387 | 884 | 408 | 0.930 | Replication | deCode test | 8 | |
| Kupfer et al. [ | 2010 | African | Colon | 379 | 340 | 76 | 455 | 429 | 101 | 0.994 | Replication | Sequenom | 7 | |
| Caucasian | Colon | 88 | 199 | 112 | 85 | 183 | 99 | 0.981 | Replication | Sequenom | 7 | |||
| Mates et al. [ | 2010 | Caucasian | Colon | 28 | 37 | 27 | 15 | 57 | 23 | 0.061 | Replication | Centaurus | 6 | |
| Mates et al. [ | 2011 | Caucasian | Colon | 42 | 69 | 42 | 32 | 106 | 43 | 0.225 | Replication | Centaurus | 7 | |
| Cui et al. [ | 2011 | Asian | Colon | 1628 | 1007 | 155 | 2247 | 1190 | 147 | 0.501 | Replication | Illumina | 8 | |
| Li et al. [ | 2011 | Asian | Colon | 73 | 53 | 12 | 81 | 73 | 14 | 0.665 | Replication | Sequenom | 7 | |
| Ho et al. [ | 2011 | Asian | Colon | 343 | 420 | 129 | 376 | 405 | 109 | 0.997 | Replication | Sequenom | 7 | |
| Song et al. [ | 2012 | Asian | Colon | 399 | 232 | 10 | 732 | 272 | 33 | 0.214 | Replication | TaqMan | 6 | |
| Lubbe et al. [ | 2012 | Caucasian | Colon | 444 | 969 | 624 | 1394 | 3021 | 1636 | 0.993 | Replication | Allele-PCR | 7 | |
| Garcia-Albeniz et al. [ | 2012 | Caucasian | Colon | 90 | 233 | 118 | 538 | 1120 | 600 | 0.731 | Replication | TaqMan | 8 | |
| Phipps et al. [ | 2012 | Caucasian | Colon | 657 | 1526 | 884 | 574 | 1597 | 1112 | 0.988 | Replication | TaqMan | 7 | |
| Kirac et al. [ | 2013 | Caucasian | Colon | 63 | 143 | 96 | 172 | 291 | 131 | 0.705 | Replication | Illumina | 8 | |
| Yang et al. [ | 2014 | Asian | Colon | 342 | 298 | 65 | 891 | 752 | 159 | 0.985 | Replication | Allele-PCR | 7 | |
| Kurlapska et al. [ | 2014 | Caucasian | Colon | 54 | 93 | 65 | 716 | 1394 | 730 | 0.330 | Replication | Sequenom | 7 | |
| Zhang et al. [ | 2014 | Asian | Colon | 400 | 277 | 51 | 1894 | 1170 | 212 | 0.858 | Replication | TaqMan | 7 | |
| Hong et al. [ | 2015 | Asian | Colon | 126 | 63 | 9 | 182 | 127 | 19 | 0.608 | Replication | Illumina | 7 | |
| Baert-Desurmont et al. [ | 2016 | Caucasian | Colon | 89 | 157 | 104 | 191 | 493 | 343 | 0.555 | Replication | SNaPshot | 8 | |
| Abd EI-Fattah et al. [ | 2016 | Caucasian | Colon | 20 | 35 | 22 | 11 | 15 | 10 | 0.319 | Replication | TaqMan | 7 | |
| Broderick et al.-A group [ | 2007 | Caucasian | Colon | 159 | 309 | 151 | 326 | 467 | 167 | 0.991 | GWAS | Illumina | 8 | |
| -B group | 2007 | Caucasian | Colon | 1247 | 2204 | 973 | 1248 | 1898 | 722 | 0.994 | Replication | Allele-PCR | 8 | |
| -C group | 2007 | Caucasian | Colon | 582 | 991 | 422 | 558 | 834 | 312 | 0.990 | Replication | Allele-PCR | 8 | |
| -D group | 2007 | Caucasian | Colon | 277 | 468 | 198 | 106 | 168 | 67 | 0.976 | Replication | Allele-PCR | 8 | |
| Middeldorp et al. [ | 2009 | Caucasian | Colon | 301 | 493 | 201 | 482 | 643 | 215 | 0.982 | Replication | TaqMan | 7 | |
| Curtin et al. [ | 2009 | Caucasian | Colon | 314 | 530 | 226 | 332 | 521 | 188 | 0.509 | Replication | SNPlex | 8 | |
| Thompson et al. [ | 2009 | Mixed | Colon | 196 | 248 | 116 | 220 | 370 | 129 | 0.218 | Replication | TaqMan | 8 | |
| Pittman et al. [ | 2009 | Caucasian | Colon | 716 | 1261 | 555 | 859 | 1275 | 473 | 0.998 | Replication | Allele-PCR | 8 | |
| Kupfer et al. [ | 2010 | African | Colon | 401 | 327 | 67 | 525 | 388 | 72 | 0.979 | Replication | Sequenom | 7 | |
| 2010 | Caucasian | Colon | 197 | 121 | 81 | 119 | 180 | 68 | 0.996 | Replication | Sequenom | 7 | ||
| Slattery et al. [ | 2010 | Caucasian | Colon | 503 | 754 | 332 | 676 | 928 | 327 | 0.779 | Replication | Illumina | 8 | |
| Ho et al. [ | 2011 | Asian | Colon | 276 | 343 | 97 | 304 | 345 | 65 | 0.557 | Replication | Sequenom | 7 | |
| Scollen et al. [ | 2011 | Mixed | Colon | 710 | 1031 | 425 | 730 | 1083 | 437 | 0.326 | Replication | TaqMan | 8 | |
| Zhang et al. [ | 2014 | Asian | Colon | 418 | 263 | 47 | 1947 | 1135 | 194 | 0.096 | Replication | TaqMan | 8 | |
SNP: single nucleotide polymorphisms: HWE: Hardy-Weinberg equilibrium.
Meta-analysis of the association between SMAD7 polymorphisms and colorectal cancer risk
| SNP | Comparison | Subgroup | Heterogeneity test | Model | OR (95% CI) | |||
|---|---|---|---|---|---|---|---|---|
| rs4464148 | CC | Overall | 1.3 | 0.43 | F | <0.01 | 0.13 | 1.23(1.14–1.33) |
| Caucasian | 12.3 | 0.33 | F | <0.01 | 1.22(1.13–1.32) | |||
| Asian | 0 | 0.71 | F | 0.03 | 1.39(1.04–1.87) | |||
| CC+TC | Overall | 73.8 | 0.00 | R | 0.07 | 0.51 | 1.10(0.99–1.22) | |
| Caucasian | 76.8 | 0.00 | R | 0.16 | 1.08(0.97–1.21) | |||
| Asian | 0 | 0.41 | F | 0.02 | 1.36(1.05–1.75) | |||
| C | Overall | 66.2 | 0.00 | R | <0.01 | 0.36 | 1.12(1.04–1.19) | |
| Caucasian | 67.7 | 0.00 | R | 0.01 | 1.10(1.02–1.18) | |||
| Asian | 66 | 0.09 | F | <0.01 | 1.35(1.12–1.63) | |||
| rs4939827 | TT | Overall | 73.3 | 0.00 | R | <0.01 | 0.89 | 1.15(1.07–1.22) |
| Caucasian | 61.2 | 0.00 | R | <0.01 | 1.19(1.12–1.26) | |||
| Asian | 75.8 | 0.00 | R | 0.73 | 1.04(0.84–1.28) | |||
| TT+TC | Overall | 71.8 | 0.00 | R | <0.01 | 0.14 | 1.13(1.07–1.20) | |
| Caucasian | 71.6 | 0.00 | R | <0.01 | 1.16(1.08–1.24) | |||
| Asian | 74.0 | 0.00 | R | 0.31 | 1.07(0.94–1.23) | |||
| T | Overall | 79.6 | 0.00 | R | <0.01 | 0.45 | 1.11(1.06–1.16) | |
| Caucasian | 74.7 | 0.00 | R | <0.01 | 1.13(1.08–1.18) | |||
| Asian | 56.9 | 0.00 | R | 0.33 | 1.07(0.94–1.21) | |||
| rs12952717 | TT | Overall | 13.2 | 0.31 | F | <0.01 | 0.54 | 1.22(1.16–1.29) |
| Caucasian | 0 | 0.87 | F | <0.01 | 1.25(1.18–1.32) | |||
| Asian | 54.9 | 0.14 | F | 0.02 | 1.31(1.04–1.65) | |||
| TT+TC | Overall | 51.3 | 0.02 | R | <0.01 | 0.66 | 1.15(1.08–1.23) | |
| Caucasian | 45.3 | 0.06 | F | <0.01 | 1.19(1.13–1.25) | |||
| Asian | 0.0 | 0.54 | F | 0.082 | 1.12(0.99–1.28) | |||
| T | Overall | 51.5 | 0.02 | R | <0.01 | 0.85 | 1.13(1.09–1.19) | |
| Caucasian | 29.8 | 0.17 | F | <0.01 | 1.16(1.12–1.20) | |||
| Asian | 19.6 | 0.27 | F | 0.02 | 1.13(1.02–1.25) | |||
: P value of heterogeneity test; : P value of Z test; : P value of Egger's test. R: random-effects model. F: fixed-effects model
Figure 2Forest plot of cancer risk associated with the SMAD7 polymorphisms in colorectal cancer studies with recessive genetic models
The squares and horizontal lines correspond to the study-specific odds ratio (OR) and 95% confidence interval (95% CI). The area of the squares reflects the weight (inverse of the variance). A. SMAD7 rs4464148; B. SMAD7 rs4939827; C. SMAD7 rs12953717.