Literature DB >> 19843678

Enrichment of low penetrance susceptibility loci in a Dutch familial colorectal cancer cohort.

Anneke Middeldorp1, Shantie Jagmohan-Changur, Ronald van Eijk, Carli Tops, Peter Devilee, Hans F A Vasen, Frederik J Hes, Richard Houlston, Ian Tomlinson, Jeanine J Houwing-Duistermaat, Juul T Wijnen, Hans Morreau, Tom van Wezel.   

Abstract

Recent genome-wide association studies have identified several loci that confer an increased risk of colorectal cancer (CRC). We studied the role of the 8q24.21 (rs6983267), 18q21.1 (rs12953717), 15q13.3 (rs4779584), 11q23.1 (rs3802842), 8q23.3 (rs16892766), and 10p14 (rs10795668) risk variants in a series of 995 Dutch CRC cases and 1340 controls. The CRC cases were selected on basis of having a family history of CRC and/or early-onset disease. The detailed clinical and molecular data available on the cases allowed us to examine the relationship between risk variants and clinicopathologic characteristics. We replicated the association with an increased risk of CRC cancer for all loci, except 10p14. The association with the variant on chromosome 15q13.3 was confirmed for the first time. The risks associated with variants in our series were higher (not significant) than those previously reported, consistent with our series reflecting genetic enrichment. Moreover, we show that familial CRC cases possess an increased number of risk alleles compared with solitary CRC cases (early-onset; mean age at diagnosis of 48.5 years). We also identified a significant increase in the number of risk alleles in families with early-onset disease (<or=50 years) compared with late-onset families (>50 years). In solitary CRC patients, enrichment for risk alleles was not observed, suggesting that other causes of increased CRC risk play a role in these cases. Overall, our results suggest that clustering of low-risk variants may explain part of the excess risk in CRC families.

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Year:  2009        PMID: 19843678     DOI: 10.1158/1055-9965.EPI-09-0601

Source DB:  PubMed          Journal:  Cancer Epidemiol Biomarkers Prev        ISSN: 1055-9965            Impact factor:   4.254


  40 in total

1.  Generalizability and epidemiologic characterization of eleven colorectal cancer GWAS hits in multiple populations.

Authors:  Jing He; Lynne R Wilkens; Daniel O Stram; Laurence N Kolonel; Brian E Henderson; Anna H Wu; Loic Le Marchand; Christopher A Haiman
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-11-11       Impact factor: 4.254

2.  Low-penetrance susceptibility variants in familial colorectal cancer.

Authors:  Iina Niittymäki; Eevi Kaasinen; Sari Tuupanen; Auli Karhu; Heikki Järvinen; Jukka-Pekka Mecklin; Ian P M Tomlinson; Maria Chiara Di Bernardo; Richard S Houlston; Lauri A Aaltonen
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2010-05-25       Impact factor: 4.254

3.  Association of 8q23-24 region (8q23.3 loci and 8q24.21 loci) with susceptibility to colorectal cancer: a systematic and updated meta-analysis.

Authors:  Linlin Li; Li Lv; Yuan Liang; Xiaoyu Shen; Shishi Zhou; Jia Zhu; Rui Ma
Journal:  Int J Clin Exp Med       Date:  2015-11-15

4.  Deletion and down-regulation of SMAD4 gene in colorectal cancers in a Chinese population.

Authors:  Yanling Ma; Fei Yan; Li Li; Li Liu; Jianhai Sun
Journal:  Chin J Cancer Res       Date:  2014-10       Impact factor: 5.087

Review 5.  Genetic predisposition to colorectal cancer: where we stand and future perspectives.

Authors:  Laura Valle
Journal:  World J Gastroenterol       Date:  2014-08-07       Impact factor: 5.742

Review 6.  Review: Single nucleotide polymorphisms associated with the oncogenesis of colorectal cancer.

Authors:  Koshi Mimori; Fumiaki Tanaka; Kohei Shibata; Masaki Mori
Journal:  Surg Today       Date:  2011-11-30       Impact factor: 2.549

7.  Quantitative assessment of the influence of common variation rs16892766 at 8q23.3 with colorectal adenoma and cancer susceptibility.

Authors:  Ming Li; Yahong Gu
Journal:  Mol Genet Genomics       Date:  2014-10-08       Impact factor: 3.291

8.  Allelic variation at the 8q23.3 colorectal cancer risk locus functions as a cis-acting regulator of EIF3H.

Authors:  Alan M Pittman; Silvia Naranjo; Sanni E Jalava; Philip Twiss; Yussanne Ma; Bianca Olver; Amy Lloyd; Jayaram Vijayakrishnan; Mobshra Qureshi; Peter Broderick; Tom van Wezel; Hans Morreau; Sari Tuupanen; Lauri A Aaltonen; M Eva Alonso; Miguel Manzanares; Angela Gavilán; Tapio Visakorpi; José Luis Gómez-Skarmeta; Richard S Houlston
Journal:  PLoS Genet       Date:  2010-09-16       Impact factor: 5.917

9.  Association studies on 11 published colorectal cancer risk loci.

Authors:  S von Holst; S Picelli; D Edler; C Lenander; J Dalén; F Hjern; N Lundqvist; U Lindforss; L Påhlman; K Smedh; A Törnqvist; J Holm; M Janson; M Andersson; S Ekelund; L Olsson; S Ghazi; N Papadogiannakis; A Tenesa; S M Farrington; H Campbell; M G Dunlop; A Lindblom
Journal:  Br J Cancer       Date:  2010-07-20       Impact factor: 7.640

10.  Single-nucleotide polymorphism associations for colorectal cancer in southern chinese population.

Authors:  Fen-Xia Li; Xue-Xi Yang; Ni-Ya Hu; Hong-Yan Du; Qiang Ma; Ming Li
Journal:  Chin J Cancer Res       Date:  2012-03       Impact factor: 5.087

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