Literature DB >> 27926848

Constriction by Dynamin: Elasticity versus Adhesion.

Zachary A McDargh1, Pablo Vázquez-Montejo2, Jemal Guven3, Markus Deserno4.   

Abstract

Any cellular fission process is completed when the neck connecting almost-separate membrane compartments is severed. This crucial step is somehow accomplished by proteins from the dynamin family, which polymerize into helical spirals around such necks. Much research has been devoted to elucidating the specifics of that somehow, but despite no shortage of ideas, the question is not settled. Pictorially obvious notions of strangling or pushing are difficult to render in mechanically precise terms. Moreover, because dynamin is a GTPase, it is tempting to speculate that it has a motor activity that assists the necessary severing action, but again the underlying mechanics is not obvious. We believe the difficulty to be the mechanically nontrivial nature of confining elastic filaments onto curved surfaces, for which efficient methods to conceptualize the associated forces and torques have only recently appeared. Here we investigate the implications of a conceptually simple yet mechanically challenging model: consider an elastic helical filament confined to a surface mimicking the neck between two membrane compartments, which we assume to take the shape of a catenoid. What can we say about the expected length of such adsorbed filaments, their shapes, and the forces they exert, as a function of the key parameters in the model? While real dynamin is surely more complex, we consider such a minimal model to be the indispensable baseline. Without knowing what such a model can and cannot explain, it is difficult to justify more complex mechanisms, or understand the constraints under which this machinery evolved in the first place. Copyright Â
© 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27926848      PMCID: PMC5153553          DOI: 10.1016/j.bpj.2016.10.019

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

1.  Classification and evolution of P-loop GTPases and related ATPases.

Authors:  Detlef D Leipe; Yuri I Wolf; Eugene V Koonin; L Aravind
Journal:  J Mol Biol       Date:  2002-03-15       Impact factor: 5.469

2.  The single dynamin-like protein of Trypanosoma brucei regulates mitochondrial division and is not required for endocytosis.

Authors:  Gareth W Morgan; David Goulding; Mark C Field
Journal:  J Biol Chem       Date:  2003-12-11       Impact factor: 5.157

3.  Membrane fission: model for intermediate structures.

Authors:  Yonathan Kozlovsky; Michael M Kozlov
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

4.  GTP-dependent twisting of dynamin implicates constriction and tension in membrane fission.

Authors:  Aurélien Roux; Katherine Uyhazi; Adam Frost; Pietro De Camilli
Journal:  Nature       Date:  2006-04-30       Impact factor: 49.962

Review 5.  Dynamin: functional design of a membrane fission catalyst.

Authors:  Sandra L Schmid; Vadim A Frolov
Journal:  Annu Rev Cell Dev Biol       Date:  2011-05-18       Impact factor: 13.827

6.  The crystal structure of dynamin.

Authors:  Marijn G J Ford; Simon Jenni; Jodi Nunnari
Journal:  Nature       Date:  2011-09-18       Impact factor: 49.962

7.  Confinement of semiflexible polymers.

Authors:  Jemal Guven; Pablo Vázquez-Montejo
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-02-16

8.  A dynamin-like protein (ADL2b), rather than FtsZ, is involved in Arabidopsis mitochondrial division.

Authors:  Shin-ichi Arimura; Nobuhiro Tsutsumi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

9.  Geometric catalysis of membrane fission driven by flexible dynamin rings.

Authors:  Anna V Shnyrova; Pavel V Bashkirov; Sergey A Akimov; Thomas J Pucadyil; Joshua Zimmerberg; Sandra L Schmid; Vadim A Frolov
Journal:  Science       Date:  2013-03-22       Impact factor: 47.728

Review 10.  Mechanics of dynamin-mediated membrane fission.

Authors:  Sandrine Morlot; Aurélien Roux
Journal:  Annu Rev Biophys       Date:  2013       Impact factor: 12.981

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  5 in total

1.  The tilted helix model of dynamin oligomers.

Authors:  Avihay Kadosh; Adai Colom; Ben Yellin; Aurélien Roux; Tom Shemesh
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-12       Impact factor: 11.205

2.  Polymer-like Model to Study the Dynamics of Dynamin Filaments on Deformable Membrane Tubes.

Authors:  Jeffrey K Noel; Frank Noé; Oliver Daumke; Alexander S Mikhailov
Journal:  Biophys J       Date:  2019-10-09       Impact factor: 4.033

3.  The role of scaffold reshaping and disassembly in dynamin driven membrane fission.

Authors:  Martina Pannuzzo; Zachary A McDargh; Markus Deserno
Journal:  Elife       Date:  2018-12-18       Impact factor: 8.140

4.  The role of traction in membrane curvature generation.

Authors:  H Alimohamadi; R Vasan; J E Hassinger; J C Stachowiak; P Rangamani
Journal:  Mol Biol Cell       Date:  2018-07-25       Impact factor: 4.138

5.  Quantification and demonstration of the collective constriction-by-ratchet mechanism in the dynamin molecular motor.

Authors:  Oleg M Ganichkin; Renee Vancraenenbroeck; Gabriel Rosenblum; Hagen Hofmann; Alexander S Mikhailov; Oliver Daumke; Jeffrey K Noel
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-13       Impact factor: 11.205

  5 in total

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