Literature DB >> 22463345

Confinement of semiflexible polymers.

Jemal Guven1, Pablo Vázquez-Montejo.   

Abstract

A variational framework is developed to examine the equilibrium states of a semiflexible polymer that is constrained to lie on a fixed surface. As an application the confinement of a closed polymer loop of fixed length 2π R within a spherical cavity of smaller radius, R(0), is considered. It is shown that an infinite number of distinct periodic completely attached equilibrium states exist, labeled by two integers: n = 2,3,4,... and p = 1,2,3,..., the number of periods of the polar and azimuthal angles, respectively. Small loops oscillate about a geodesic circle: n = 2, p = 1 is the stable ground state; states with higher n exhibit instabilities. If R ≥ 2R(0) new states appear as oscillations about a doubly covered geodesic circle; the state n = 3,p = 2 replaces the twofold as the ground state in a finite band of values of R. With increasing R, loop states make a transition from oscillatory and orbital behavior on crossing the poles, returning to oscillation upon collapse to a multiple cover of a geodesic circle (signaled, respectively, by an increase in p and an increase in n). The force transmitted to the surface does not increase monotonically with loop size, but does asymptotically. It behaves discontinuously where n changes. The contribution to energy from geodesic curvature is bounded. In large loops, the energy becomes dominated by a state independent contribution proportional to the loop size; the energy gap between the ground state and excited states disappears.

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Year:  2012        PMID: 22463345     DOI: 10.1103/PhysRevE.85.026603

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  6 in total

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4.  Constriction by Dynamin: Elasticity versus Adhesion.

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Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

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  6 in total

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