Literature DB >> 31189604

The tilted helix model of dynamin oligomers.

Avihay Kadosh1, Adai Colom2,3, Ben Yellin1, Aurélien Roux2,3, Tom Shemesh4.   

Abstract

Dynamin proteins assemble into characteristic helical structures around necks of clathrin-coated membrane buds. Hydrolysis of dynamin-bound GTP results in both fission of the membrane neck and partial disruption of the dynamin oligomer. Imaging by atomic force microscopy reveals that, on GTP hydrolysis, dynamin oligomers undergo a dynamic remodeling and lose their distinctive helical shape. While breakup of the dynamin helix is a critical stage in clathrin-mediated endocytosis, the mechanism for this remodeling of the oligomer has not been resolved. In this paper, we formulate an analytical, elasticity-based model for the reshaping and disassembly of the dynamin scaffold. We predict that the shape of the oligomer is modulated by the orientation of dynamin's pleckstrin homology (PH) domain relative to the underlying membrane. Our results indicate that tilt of the PH domain drives deformation and fragmentation of the oligomer, in agreement with experimental observations. This model motivated the introduction of the tilted helix: a curve that maintains a fixed angle between its normal and the normal of the embedding surface. Our findings highlight the importance of tilt as a key regulator of size and morphology of membrane-bound oligomers.

Entities:  

Keywords:  dynamin; lipid membrane; protein oligomerization; tilt

Mesh:

Substances:

Year:  2019        PMID: 31189604      PMCID: PMC6601248          DOI: 10.1073/pnas.1903769116

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  44 in total

1.  GTPase activity of dynamin and resulting conformation change are essential for endocytosis.

Authors:  B Marks; M H Stowell; Y Vallis; I G Mills; A Gibson; C R Hopkins; H T McMahon
Journal:  Nature       Date:  2001-03-08       Impact factor: 49.962

2.  A high-speed atomic force microscope for studying biological macromolecules.

Authors:  T Ando; N Kodera; E Takai; D Maruyama; K Saito; A Toda
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-09       Impact factor: 11.205

3.  Membrane fission: model for intermediate structures.

Authors:  Yonathan Kozlovsky; Michael M Kozlov
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

4.  Tilt modulus of a lipid monolayer.

Authors:  S May; Y Kozlovsky; A Ben-Shaul; M M Kozlov
Journal:  Eur Phys J E Soft Matter       Date:  2004-07       Impact factor: 1.890

5.  Rapid constriction of lipid bilayers by the mechanochemical enzyme dynamin.

Authors:  Dganit Danino; Kwan-Hoon Moon; Jenny E Hinshaw
Journal:  J Struct Biol       Date:  2004-09       Impact factor: 2.867

6.  Unbinding transition of a biological model membrane.

Authors: 
Journal:  Phys Rev Lett       Date:  1989-06-12       Impact factor: 9.161

7.  GTP-dependent twisting of dynamin implicates constriction and tension in membrane fission.

Authors:  Aurélien Roux; Katherine Uyhazi; Adam Frost; Pietro De Camilli
Journal:  Nature       Date:  2006-04-30       Impact factor: 49.962

8.  A corkscrew model for dynamin constriction.

Authors:  Jason A Mears; Pampa Ray; Jenny E Hinshaw
Journal:  Structure       Date:  2007-10       Impact factor: 5.006

9.  Fission of biological membranes: interplay between dynamin and lipids.

Authors:  M M Kozlov
Journal:  Traffic       Date:  2001-01       Impact factor: 6.215

10.  Three-dimensional reconstruction of dynamin in the constricted state.

Authors:  P Zhang; J E Hinshaw
Journal:  Nat Cell Biol       Date:  2001-10       Impact factor: 28.824

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  3 in total

1.  Polymer-like Model to Study the Dynamics of Dynamin Filaments on Deformable Membrane Tubes.

Authors:  Jeffrey K Noel; Frank Noé; Oliver Daumke; Alexander S Mikhailov
Journal:  Biophys J       Date:  2019-10-09       Impact factor: 4.033

2.  Flexible pivoting of dynamin pleckstrin homology domain catalyzes fission: insights into molecular degrees of freedom.

Authors:  Krishnakanth Baratam; Kirtika Jha; Anand Srivastava
Journal:  Mol Biol Cell       Date:  2021-05-12       Impact factor: 4.138

3.  Quantification and demonstration of the collective constriction-by-ratchet mechanism in the dynamin molecular motor.

Authors:  Oleg M Ganichkin; Renee Vancraenenbroeck; Gabriel Rosenblum; Hagen Hofmann; Alexander S Mikhailov; Oliver Daumke; Jeffrey K Noel
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-13       Impact factor: 11.205

  3 in total

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