Literature DB >> 2780317

Forks and combs and DNA: the synthesis of branched oligodeoxyribonucleotides.

T Horn1, M S Urdea.   

Abstract

Nucleoside phosphoramidite derivatives containing two protected primary hydroxyl functions have been incorporated into synthetic oligonucleotides as 'branching monomers'. With selective deprotection, multiple identical copies of an additional oligonucleotide can be incorporated to form fork- or comb-like structures for use as signal amplification materials in nucleic acid hybridization assays.

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Year:  1989        PMID: 2780317      PMCID: PMC318426          DOI: 10.1093/nar/17.17.6959

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  9 in total

1.  Letter: Levulinic esters. An alcohol protecting group applicable to some nucleosides.

Authors:  A Hassner; G Strand; M Rubenstein; A Patchornik
Journal:  J Am Chem Soc       Date:  1975-03-19       Impact factor: 15.419

2.  Design, chemical synthesis, and molecular cloning of a gene for human epidermal growth factor.

Authors:  M S Urdea
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

3.  Excision of an intact intron as a novel lariat structure during pre-mRNA splicing in vitro.

Authors:  B Ruskin; A R Krainer; T Maniatis; M R Green
Journal:  Cell       Date:  1984-08       Impact factor: 41.582

4.  Lariat RNA's as intermediates and products in the splicing of messenger RNA precursors.

Authors:  R A Padgett; M M Konarska; P J Grabowski; S F Hardy; P A Sharp
Journal:  Science       Date:  1984-08-31       Impact factor: 47.728

5.  Polyadenylylated nuclear RNA contains branches.

Authors:  J C Wallace; M Edmonds
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205

6.  5'-Levulinyl and 2'-tetrahydrofuranyl protection for the synthesis of oligoribonucleotides by the phosphoramidite approach.

Authors:  S Iwai; E Ohtsuka
Journal:  Nucleic Acids Res       Date:  1988-10-25       Impact factor: 16.971

7.  A novel method for the rapid detection of specific nucleotide sequences in crude biological samples without blotting or radioactivity; application to the analysis of hepatitis B virus in human serum.

Authors:  M S Urdea; J A Running; T Horn; J Clyne; L L Ku; B D Warner
Journal:  Gene       Date:  1987       Impact factor: 3.688

8.  Construction and evaluation of an instrument for the automated synthesis of oligodeoxyribonucleotides.

Authors:  B D Warner; M E Warner; G A Karns; L Ku; S Brown-Shimer; M S Urdea
Journal:  DNA       Date:  1984-10

9.  A comparison of non-radioisotopic hybridization assay methods using fluorescent, chemiluminescent and enzyme labeled synthetic oligodeoxyribonucleotide probes.

Authors:  M S Urdea; B D Warner; J A Running; M Stempien; J Clyne; T Horn
Journal:  Nucleic Acids Res       Date:  1988-06-10       Impact factor: 16.971

  9 in total
  21 in total

1.  Signal amplification through nucleotide extension and excision on a dendritic DNA platform.

Authors:  S Capaldi; R C Getts; S D Jayasena
Journal:  Nucleic Acids Res       Date:  2000-04-01       Impact factor: 16.971

Review 2.  Strategies for signal amplification in nucleic acid detection.

Authors:  S C Andras; J B Power; E C Cocking; M R Davey
Journal:  Mol Biotechnol       Date:  2001-09       Impact factor: 2.695

3.  Ligase-mediated construction of branched DNA strands: a novel DNA joining activity catalyzed by T4 DNA ligase.

Authors:  Maritha Mendel-Hartvig; Anil Kumar; Ulf Landegren
Journal:  Nucleic Acids Res       Date:  2004-01-02       Impact factor: 16.971

Review 4.  Advances in nucleic acid-based detection methods.

Authors:  M J Wolcott
Journal:  Clin Microbiol Rev       Date:  1992-10       Impact factor: 26.132

5.  A fiber optic biosensor for fluorimetric detection of triple-helical DNA.

Authors:  A H Uddin; P A Piunno; R H Hudson; M J Damha; U J Krull
Journal:  Nucleic Acids Res       Date:  1997-10-15       Impact factor: 16.971

6.  The Challenge of Structural Control on the Nanoscale: Bottom-Up Self-Assembly of Nucleic Acids in 3D.

Authors:  Nadrian C Seeman
Journal:  Int J Nanotechnol       Date:  2005-10-01       Impact factor: 0.367

7.  Convergent and general one-step DNA-catalyzed synthesis of multiply branched DNA.

Authors:  Timothy P Mui; Scott K Silverman
Journal:  Org Lett       Date:  2008-09-23       Impact factor: 6.005

8.  Comparative evaluation of NASBA HIV-1 RNA QT, AMPLICOR-HIV monitor, and QUANTIPLEX HIV RNA assay, three methods for quantification of human immunodeficiency virus type 1 RNA in plasma.

Authors:  H Revets; D Marissens; S de Wit; P Lacor; N Clumeck; S Lauwers; G Zissis
Journal:  J Clin Microbiol       Date:  1996-05       Impact factor: 5.948

9.  Use of a signature nucleotide sequence of hepatitis C virus for detection of viral RNA in human serum and plasma.

Authors:  T A Cha; J Kolberg; B Irvine; M Stempien; E Beall; M Yano; Q L Choo; M Houghton; G Kuo; J H Han
Journal:  J Clin Microbiol       Date:  1991-11       Impact factor: 5.948

10.  Accurate quantification of hepatitis C virus (HCV) RNA from all HCV genotypes by using branched-DNA technology.

Authors:  J Detmer; R Lagier; J Flynn; C Zayati; J Kolberg; M Collins; M Urdea; R Sánchez-Pescador
Journal:  J Clin Microbiol       Date:  1996-04       Impact factor: 5.948

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