Literature DB >> 11697219

Strategies for signal amplification in nucleic acid detection.

S C Andras1, J B Power, E C Cocking, M R Davey.   

Abstract

Many aspects of molecular genetics necessitate the detection of nucleic acid sequences. Current approaches involving target amplification (in situ PCR, Primed in situ Labeling, Self-Sustained Sequence Replication, Strand Displacement Amplification), probe amplification (Ligase Chain Reaction, Padlock Probes, Rolling Circle Amplification) and signal amplification (Tyramide Signal Amplification, Branched DNA Amplification) are summarized in the present review, together with their advantages and limitations.

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Year:  2001        PMID： 11697219     DOI： 10.1385/MB:19:1:029

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN： 1073-6085            Impact factor:   2.695


  86 in total

Review 1.  Accessing genomic information: alternatives to PCR.

Authors:  A Isaksson; U Landegren
Journal:  Curr Opin Biotechnol       Date:  1999-02       Impact factor: 9.740

Review 2.  The ligase chain reaction in a PCR world.

Authors:  F Barany
Journal:  PCR Methods Appl       Date:  1991-08

3.  Mutation detection and single-molecule counting using isothermal rolling-circle amplification.

Authors:  P M Lizardi; X Huang; Z Zhu; P Bray-Ward; D C Thomas; D C Ward
Journal:  Nat Genet       Date:  1998-07       Impact factor: 38.330

4.  Chemical synthesis and characterization of branched oligodeoxyribonucleotides (bDNA) for use as signal amplifiers in nucleic acid quantification assays.

Authors:  T Horn; C A Chang; M S Urdea
Journal:  Nucleic Acids Res       Date:  1997-12-01       Impact factor: 16.971

5.  Tyramide signal amplification in brain immunocytochemistry: adaptation to electron microscopy.

Authors:  A Stanarius; H Faber-Zuschratter; I Töpel; S Schulz; G Wolf
Journal:  J Neurosci Methods       Date:  1999-04-01       Impact factor: 2.390

6.  Catalyzed reporter deposition, a novel method of signal amplification. Application to immunoassays.

Authors:  M N Bobrow; T D Harris; K J Shaughnessy; G J Litt
Journal:  J Immunol Methods       Date:  1989-12-20       Impact factor: 2.303

7.  Assessment of aneuploidy for chromosomes 8, 9, 13, 16, and 21 in human sperm by using primed in situ labeling technique.

Authors:  F Pellestor; A Girardet; L Coignet; B Andréo; J P Charlieu
Journal:  Am J Hum Genet       Date:  1996-04       Impact factor: 11.025

8.  PCR-in situ hybridization detection of human T-cell lymphotropic virus type 1 (HTLV-1) tax proviral DNA in peripheral blood lymphocytes of patients with HTLV-1-associated neurologic disease.

Authors:  M C Levin; R J Fox; T Lehky; M Walter; C H Fox; N Flerlage; R Bamford; S Jacobson
Journal:  J Virol       Date:  1996-02       Impact factor: 5.103

9.  Evaluation of methods for hepatitis C virus detection in archival liver biopsies. Comparison of histology, immunohistochemistry, in-situ hybridization, reverse transcriptase polymerase chain reaction (RT-PCR) and in-situ RT-PCR.

Authors:  P Komminoth; V Adams; A A Long; J Roth; P Saremaslani; R Flury; M Schmid; P U Heitz
Journal:  Pathol Res Pract       Date:  1994-11       Impact factor: 3.250

10.  Detection of point mutations with a modified ligase chain reaction (Gap-LCR).

Authors:  K Abravaya; J J Carrino; S Muldoon; H H Lee
Journal:  Nucleic Acids Res       Date:  1995-02-25       Impact factor: 16.971
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  18 in total

1.  Recombinase polymerase amplification assay for rapid detection of Francisella tularensis.

Authors:  Milena Euler; Yongjie Wang; Peter Otto; Herbert Tomaso; Raquel Escudero; Pedro Anda; Frank T Hufert; Manfred Weidmann
Journal:  J Clin Microbiol       Date:  2012-04-18       Impact factor: 5.948

2.  Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification.

Authors:  Liyou Wu; Xueduan Liu; Christopher W Schadt; Jizhong Zhou
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

Review 3.  Isothermal DNA amplification in vitro: the helicase-dependent amplification system.

Authors:  Yong-Joo Jeong; Kkothanahreum Park; Dong-Eun Kim
Journal:  Cell Mol Life Sci       Date:  2009-07-24       Impact factor: 9.261

4.  Development of a panel of recombinase polymerase amplification assays for detection of biothreat agents.

Authors:  Milena Euler; Yongjie Wang; Doris Heidenreich; Pranav Patel; Oliver Strohmeier; Sydney Hakenberg; Matthias Niedrig; Frank T Hufert; Manfred Weidmann
Journal:  J Clin Microbiol       Date:  2013-01-23       Impact factor: 5.948

5.  Multiplex Single-Molecule DNA Barcoding Using an Oligonucleotide Ligation Assay.

Authors:  Ivo Severins; Malwina Szczepaniak; Chirlmin Joo
Journal:  Biophys J       Date:  2018-08-18       Impact factor: 4.033

6.  Helicase-dependent isothermal DNA amplification.

Authors:  Myriam Vincent; Yan Xu; Huimin Kong
Journal:  EMBO Rep       Date:  2004-07-09       Impact factor: 8.807

7.  Serum and muscle interleukin-15 levels decrease in aging mice: correlation with declines in soluble interleukin-15 receptor alpha expression.

Authors:  LeBris S Quinn; Barbara G Anderson; Lena Strait-Bodey; Tami Wolden-Hanson
Journal:  Exp Gerontol       Date:  2009-10-23       Impact factor: 4.032

8.  Nanobarcoding: detecting nanoparticles in biological samples using in situ polymerase chain reaction.

Authors:  Trisha Eustaquio; James F Leary
Journal:  Int J Nanomedicine       Date:  2012-11-02

9.  Application of hyperbranched rolling circle amplification for direct detection of mycobacterium tuberculosis in clinical sputum specimens.

Authors:  Yang Liu; Yan-Ling Guo; Guang-Lu Jiang; Shi-Jie Zhou; Qi Sun; Xi Chen; Xiu-Jun Chang; Ai-Ying Xing; Feng-Jiao Du; Hong-Yan Jia; Zong-De Zhang
Journal:  PLoS One       Date:  2013-06-04       Impact factor: 3.240

10.  Eurycoma longifolia upregulates osteoprotegerin gene expression in androgen- deficient osteoporosis rat model.

Authors:  Ahmad Nazrun Shuid; Eman El-arabi; Nadia Mohd Effendy; Halimaton Saadiah Abdul Razak; Norliza Muhammad; Norazlina Mohamed; Ima Nirwana Soelaiman
Journal:  BMC Complement Altern Med       Date:  2012-09-12       Impact factor: 3.659
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