Literature DB >> 27796588

Study of InDel genetic markers with forensic and ancestry informative interest in PALOP's immigrant populations in Lisboa.

Ana Inácio1,2, Heloísa Afonso Costa1,3, Cláudia Vieira da Silva1,3, Teresa Ribeiro1,3, Maria João Porto1,3, Jorge Costa Santos4,5,3, Gilberto Igrejas2, António Amorim6,7,8,9.   

Abstract

The migratory phenomenon in Portugal has become one of the main factors for the genetic variability. In the last few years, a new class of autosomal insertion/deletion markers-InDel-has attracted interest in forensic genetics. Since there is no data for InDel markers of Portuguese-speaking African countries (PALOP) immigrants living in Lisboa, our aim is the characterization of those groups of individuals by typing them with at least 30 InDel markers and to compare different groups of individuals/populations. We studied 454 bloodstain samples belonging to immigrant individuals from Angola, Guinea-Bissau, and Mozambique. DNA extraction was performed with the Chelex® 100 method. After extraction, all samples were typed with the Investigator® DIPplex method. Through the obtained results, allelic frequencies show that all markers are at Hardy-Weinberg equilibrium, and we can confirm that those populations show significant genetic distances between themselves, between them, and the host Lisboa population. Because of this, they introduce genetic variability in Lisboa population.

Entities:  

Keywords:  InDel; Lisboa population; PALOP immigrants

Mesh:

Substances:

Year:  2016        PMID: 27796588     DOI: 10.1007/s00414-016-1484-3

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  29 in total

1.  A validation study of the Qiagen Investigator DIPplex® kit; an INDEL-based assay for human identification.

Authors:  Bobby L LaRue; Jianye Ge; Jonathan L King; Bruce Budowle
Journal:  Int J Legal Med       Date:  2012-01-15       Impact factor: 2.686

2.  Population data of 30 insertion/delection polymorphisms from a sample taken in the North of Portugal.

Authors:  Ana Carvalho; Maria F Pinheiro
Journal:  Int J Legal Med       Date:  2012-04-20       Impact factor: 2.686

3.  Discrimination power of Investigator DIPplex loci in Finnish and Somali populations.

Authors:  Anu M Neuvonen; Jukka U Palo; Minttu Hedman; Antti Sajantila
Journal:  Forensic Sci Int Genet       Date:  2011-10-17       Impact factor: 4.882

4.  Genetic portrait of a native population of Cabo Verde living in Lisboa.

Authors:  António Amorim; Rodolfo Marques-Santos; Claudia Vieira-Silva; Heloisa Afonso-Costa; Rosa Espinheira; Paulo Ferreira-Gomes; Jorge Costa-Santos
Journal:  Forensic Sci Int Genet       Date:  2012-06-07       Impact factor: 4.882

5.  Population genetic analysis of insertion-deletion polymorphisms in a Brazilian population using the Investigator DIPplex kit.

Authors:  Teresinha de Jesus Brabo Ferreira Palha; Elzemar Martins Ribeiro Rodrigues; Giovanna Chaves Cavalcante; Andrea Marrero; Ilíada Rainha de Souza; Clineu Julien Seki Uehara; Carlos Henrique Ares Silveira da Motta; Daniela Koshikene; Dayse Aparecida da Silva; Elizeu Fagundes de Carvalho; Gustavo Chemale; Jorge M Freitas; Lídia Alexandre; Renato T F Paranaiba; Mirella Perruccio Soler; Sidney Santos
Journal:  Forensic Sci Int Genet       Date:  2015-04-24       Impact factor: 4.882

6.  Results for five sets of forensic genetic markers studied in a Greek population sample.

Authors:  C Tomas; I Skitsa; E Steinmeier; L Poulsen; A Ampati; C Børsting; N Morling
Journal:  Forensic Sci Int Genet       Date:  2015-01-05       Impact factor: 4.882

7.  Genetic portrait of south Portugal population with InDel markers.

Authors:  Cláudia Vieira da Silva; Sara Matos; Heloísa Afonso Costa; Paulo Morais; Rodolfo Marques Dos Santos; Rosa Espinheira; Jorge Costa Santos; António Amorim
Journal:  Forensic Sci Int Genet       Date:  2013-04-17       Impact factor: 4.882

8.  Genetic portrait of Lisboa immigrant population from Angola with mitochondrial DNA.

Authors:  Filipa Simão; Heloísa Afonso Costa; Claúdia Vieira da Silva; Teresa Ribeiro; Maria João Porto; Jorge Costa Santos; António Amorim
Journal:  Forensic Sci Int Genet       Date:  2014-09-28       Impact factor: 4.882

9.  Characterization of 114 insertion/deletion (INDEL) polymorphisms, and selection for a global INDEL panel for human identification.

Authors:  Bobby L LaRue; Robert Lagacé; Chien-Wei Chang; Allison Holt; Lori Hennessy; Jianye Ge; Jonathan L King; Ranajit Chakraborty; Bruce Budowle
Journal:  Leg Med (Tokyo)       Date:  2013-11-01       Impact factor: 1.376

10.  Population genetics of 30 INDELs in populations of Poland and Taiwan.

Authors:  Witold Pepinski; Monica Abreu-Glowacka; Malgorzata Koralewska-Kordel; Eliza Michalak; Krzysztof Kordel; Anna Niemcunowicz-Janica; Michal Szeremeta; Magdalena Konarzewska
Journal:  Mol Biol Rep       Date:  2013-05-21       Impact factor: 2.316

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  2 in total

1.  Population genetics, diversity and forensic characteristics of Tai-Kadai-speaking Bouyei revealed by insertion/deletions markers.

Authors:  Guanglin He; Zheng Ren; Jianxin Guo; Fan Zhang; Xing Zou; Hongling Zhang; Qiyan Wang; Jingyan Ji; Meiqing Yang; Ziqian Zhang; Jing Zhang; Yilizhati Nabijiang; Jiang Huang; Chuan-Chao Wang
Journal:  Mol Genet Genomics       Date:  2019-06-13       Impact factor: 3.291

2.  Developmental validations of a self-developed 39 AIM-InDel panel and its forensic efficiency evaluations in the Shaanxi Han population.

Authors:  Xingru Zhang; Chunmei Shen; Xiaoye Jin; Yuxin Guo; Tong Xie; Bofeng Zhu
Journal:  Int J Legal Med       Date:  2021-04-27       Impact factor: 2.686

  2 in total

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