Literature DB >> 22005117

Discrimination power of Investigator DIPplex loci in Finnish and Somali populations.

Anu M Neuvonen1, Jukka U Palo, Minttu Hedman, Antti Sajantila.   

Abstract

In this study, the suitability of the Investigator DIPplex insertion/deletion polymorphism (indel) kit for forensic casework was assessed through the genotyping of 151 Finns and 175 Somalis. Allele frequency and heterozygosity (H) of this 30-indel marker set were determined, and forensic efficacy was evaluated through estimation of discrimination power (DP), match probability (MP), typical paternity index (TPI), power of paternity exclusion (PE), and polymorphic information content (PIC). A high level of discrimination power was observed for the marker set in both sample groups (CDP>0.9999). East-west population substructure found previously in uniparental markers within Finland was not evident for this autosomal set (E-W F(ST)=0.003). High exclusion probability and low subdivision together demonstrate that these markers are well-suited for identification of individuals in Finland. However, values for typical paternity index and power of paternity exclusion were low (TPI range Finns=0.750-1.190, PE=0.996; TPI Somalis=0.680-1.090, PE=0.986) in comparison to standard STR sets, and thus indels are not recommended for use in paternity or kinship investigations, except as a supplement to other more powerful tools.
Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

Mesh:

Year:  2011        PMID: 22005117     DOI: 10.1016/j.fsigen.2011.09.005

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  11 in total

1.  Population data of 30 insertion/delection polymorphisms from a sample taken in the North of Portugal.

Authors:  Ana Carvalho; Maria F Pinheiro
Journal:  Int J Legal Med       Date:  2012-04-20       Impact factor: 2.686

2.  Evaluation of a 49 InDel Marker HID panel in two specific populations of South America and one population of Northern Africa.

Authors:  R S Moura-Neto; R Silva; I C Mello; T Nogueira; A A Al-Deib; B LaRue; J King; B Budowle
Journal:  Int J Legal Med       Date:  2014-12-17       Impact factor: 2.686

3.  Study of InDel genetic markers with forensic and ancestry informative interest in PALOP's immigrant populations in Lisboa.

Authors:  Ana Inácio; Heloísa Afonso Costa; Cláudia Vieira da Silva; Teresa Ribeiro; Maria João Porto; Jorge Costa Santos; Gilberto Igrejas; António Amorim
Journal:  Int J Legal Med       Date:  2016-10-29       Impact factor: 2.686

4.  Population genetic data and forensic parameters of 30 autosomal InDel markers in Santa Catarina State population, Southern Brazil.

Authors:  Sandra Regina Rachadel Torres; Clineu Julien Seki Uehara; Ana Frederica Sutter-Latorre; Bibiana Sgorla de Almeida; Tania Streck Sauerbier; Yara Costa Netto Muniz; Andrea Rita Marrero; Ilíada Rainha de Souza
Journal:  Mol Biol Rep       Date:  2014-06-12       Impact factor: 2.316

5.  Genetic polymorphism analyses of 30 InDels in Chinese Xibe ethnic group and its population genetic differentiations with other groups.

Authors:  Hao-Tian Meng; Yu-Dang Zhang; Chun-Mei Shen; Guo-Lian Yuan; Chun-Hua Yang; Rui Jin; Jiang-Wei Yan; Hong-Dan Wang; Wen-Juan Liu; Hang Jing; Bo-Feng Zhu
Journal:  Sci Rep       Date:  2015-02-05       Impact factor: 4.379

6.  Autosomal InDel polymorphisms for population genetic structure and differentiation analysis of Chinese Kazak ethnic group.

Authors:  Tingting Kong; Yahao Chen; Yuxin Guo; Yuanyuan Wei; Xiaoye Jin; Tong Xie; Yuling Mu; Qian Dong; Shaoqing Wen; Boyan Zhou; Li Zhang; Chunmei Shen; Bofeng Zhu
Journal:  Oncotarget       Date:  2017-05-12

7.  Forensic efficiency and genetic variation of 30 InDels in Vietnamese and Nigerian populations.

Authors:  Weian Du; Zhiyong Peng; Chunlei Feng; Bofeng Zhu; Bangchao Wang; Yue Wang; Chao Liu; Ling Chen
Journal:  Oncotarget       Date:  2017-10-04

8.  Population genetics of 30 INDELs in populations of Poland and Taiwan.

Authors:  Witold Pepinski; Monica Abreu-Glowacka; Malgorzata Koralewska-Kordel; Eliza Michalak; Krzysztof Kordel; Anna Niemcunowicz-Janica; Michal Szeremeta; Magdalena Konarzewska
Journal:  Mol Biol Rep       Date:  2013-05-21       Impact factor: 2.316

9.  Autosomal DIPs for population genetic structure and differentiation analyses of Chinese Xinjiang Kyrgyz ethnic group.

Authors:  Yuxin Guo; Chong Chen; Xiaoye Jin; Wei Cui; Yuanyuan Wei; Hongdan Wang; Tingting Kong; Yuling Mu; Bofeng Zhu
Journal:  Sci Rep       Date:  2018-07-23       Impact factor: 4.379

10.  Genome-wide analyses disclose the distinctive HLA architecture and the pharmacogenetic landscape of the Somali population.

Authors:  Abshir A Ali; Mikko Aalto; Jon Jonasson; Abdimajid Osman
Journal:  Sci Rep       Date:  2020-03-27       Impact factor: 4.379

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