Literature DB >> 27616198

Single-use, electricity-free amplification device for detection of HIV-1.

Kelly A Curtis1, Donna L Rudolph2, Daphne Morrison2, Dylan Guelig3, Steven Diesburg3, David McAdams3, Robert A Burton3, Paul LaBarre3, Michele Owen2.   

Abstract

Early and accurate diagnosis of HIV is key for the reduction of transmission and initiation of patient care. The availability of a rapid nucleic acid test (NAT) for use at the point-of-care (POC) will fill a gap in HIV diagnostics, improving the diagnosis of acute infection and HIV in infants born to infected mothers. In this study, we evaluated the performance of non-instrumented nucleic acid amplification, single-use disposable (NINA-SUD) devices for the detection of HIV-1 in whole blood using reverse-transcription, loop-mediated isothermal amplification (RT-LAMP) with lyophilized reagents. The NINA-SUD heating device harnesses the heat from an exothermic chemical reaction initiated by the addition of saline to magnesium iron powder. Reproducibility was demonstrated between NINA-SUD units and comparable, if not superior, performance for detecting clinical specimens was observed as compared to the thermal cycler. The stability of the lyophilized HIV-1 RT-LAMP reagents was also demonstrated following storage at -20, 4, 25, and 30°C for up to one month. The single-use, disposable NAT minimizes hands-on time and has the potential to facilitate HIV-1 testing in resource-limited settings or at the POC. Published by Elsevier B.V.

Entities:  

Keywords:  Diagnosis; HIV-1; Nucleic acid amplification; Point-of-care; RNA

Mesh:

Substances:

Year:  2016        PMID: 27616198      PMCID: PMC5056841          DOI: 10.1016/j.jviromet.2016.09.007

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  23 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Accelerated reaction by loop-mediated isothermal amplification using loop primers.

Authors:  K Nagamine; T Hase; T Notomi
Journal:  Mol Cell Probes       Date:  2002-06       Impact factor: 2.365

Review 3.  Modeling sequence evolution in acute HIV-1 infection.

Authors:  Ha Youn Lee; Elena E Giorgi; Brandon F Keele; Brian Gaschen; Gayathri S Athreya; Jesus F Salazar-Gonzalez; Kimmy T Pham; Paul A Goepfert; J Michael Kilby; Michael S Saag; Eric L Delwart; Michael P Busch; Beatrice H Hahn; George M Shaw; Bette T Korber; Tanmoy Bhattacharya; Alan S Perelson
Journal:  J Theor Biol       Date:  2009-08-04       Impact factor: 2.691

4.  An isothermal amplification reactor with an integrated isolation membrane for point-of-care detection of infectious diseases.

Authors:  Changchun Liu; Eran Geva; Michael Mauk; Xianbo Qiu; William R Abrams; Daniel Malamud; Kelly Curtis; S Michele Owen; Haim H Bau
Journal:  Analyst       Date:  2011-04-01       Impact factor: 4.616

5.  Rapid detection of HIV-1 by reverse-transcription, loop-mediated isothermal amplification (RT-LAMP).

Authors:  Kelly A Curtis; Donna L Rudolph; S Michele Owen
Journal:  J Virol Methods       Date:  2008-06-03       Impact factor: 2.014

6.  Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection.

Authors:  Brandon F Keele; Elena E Giorgi; Jesus F Salazar-Gonzalez; Julie M Decker; Kimmy T Pham; Maria G Salazar; Chuanxi Sun; Truman Grayson; Shuyi Wang; Hui Li; Xiping Wei; Chunlai Jiang; Jennifer L Kirchherr; Feng Gao; Jeffery A Anderson; Li-Hua Ping; Ronald Swanstrom; Georgia D Tomaras; William A Blattner; Paul A Goepfert; J Michael Kilby; Michael S Saag; Eric L Delwart; Michael P Busch; Myron S Cohen; David C Montefiori; Barton F Haynes; Brian Gaschen; Gayathri S Athreya; Ha Y Lee; Natasha Wood; Cathal Seoighe; Alan S Perelson; Tanmoy Bhattacharya; Bette T Korber; Beatrice H Hahn; George M Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-19       Impact factor: 11.205

7.  Colorimetric detection of loop-mediated isothermal amplification reaction by using hydroxy naphthol blue.

Authors:  Motoki Goto; Eiichi Honda; Atsuo Ogura; Akio Nomoto; Ken-Ichi Hanaki
Journal:  Biotechniques       Date:  2009-03       Impact factor: 1.993

8.  State of the art for diagnosis of HIV infection.

Authors:  Bernard M Branson
Journal:  Clin Infect Dis       Date:  2007-12-15       Impact factor: 9.079

9.  Isothermal amplification using a chemical heating device for point-of-care detection of HIV-1.

Authors:  Kelly A Curtis; Donna L Rudolph; Irene Nejad; Jered Singleton; Andy Beddoe; Bernhard Weigl; Paul LaBarre; S Michele Owen
Journal:  PLoS One       Date:  2012-02-23       Impact factor: 3.240

10.  Evaluation of non-instrumented nucleic acid amplification by loop-mediated isothermal amplification (NINA-LAMP) for the diagnosis of malaria in Northwest Ethiopia.

Authors:  Meslo Sema; Abebe Alemu; Abebe Genetu Bayih; Sisay Getie; Gebeyaw Getnet; Dylan Guelig; Robert Burton; Paul LaBarre; Dylan R Pillai
Journal:  Malar J       Date:  2015-01-28       Impact factor: 2.979

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  8 in total

Review 1.  Inorganic Complexes and Metal-Based Nanomaterials for Infectious Disease Diagnostics.

Authors:  Christine F Markwalter; Andrew G Kantor; Carson P Moore; Kelly A Richardson; David W Wright
Journal:  Chem Rev       Date:  2018-12-04       Impact factor: 60.622

2.  An Ultracompact Real-Time Fluorescence Loop-Mediated Isothermal Amplification (LAMP) Analyzer.

Authors:  Gihoon Choi; Weihua Guan
Journal:  Methods Mol Biol       Date:  2022

3.  Fingerpick Blood-Based Nucleic Acid Testing on A USB Interfaced Device towards HIV self-testing.

Authors:  Tianyi Liu; Gihoon Choi; Zifan Tang; Aneesh Kshirsagar; Anthony J Politza; Weihua Guan
Journal:  Biosens Bioelectron       Date:  2022-04-08       Impact factor: 12.545

Review 4.  Bridging the gap between development of point-of-care nucleic acid testing and patient care for sexually transmitted infections.

Authors:  Kuangwen Hsieh; Johan H Melendez; Charlotte A Gaydos; Tza-Huei Wang
Journal:  Lab Chip       Date:  2022-02-01       Impact factor: 7.517

5.  A portable device for nucleic acid quantification powered by sunlight, a flame or electricity.

Authors:  Ryan Snodgrass; Andrea Gardner; Aggrey Semeere; Varun Lingaiah Kopparthy; Jens Duru; Toby Maurer; Jeffrey Martin; Ethel Cesarman; David Erickson
Journal:  Nat Biomed Eng       Date:  2018-09-11       Impact factor: 25.671

Review 6.  SARS-CoV-2 in Mexico: Beyond Detection Methods, Scope and Limitations.

Authors:  Cynthia Martinez-Liu; Natalia Martínez-Acuña; Daniel Arellanos-Soto; Kame Galan-Huerta; Sonia Lozano-Sepulveda; María Del Carmen Martínez-Guzmán; Ana Maria Rivas-Estilla
Journal:  Diagnostics (Basel)       Date:  2021-01-14

7.  Electricity-free chemical heater for isothermal nucleic acid amplification with applications in COVID-19 home testing.

Authors:  Rui Jie Li; Michael G Mauk; Youngung Seok; Haim H Bau
Journal:  Analyst       Date:  2021-06-28       Impact factor: 5.227

8.  Evaluation of the stability of lyophilized loop-mediated isothermal amplification reagents for the detection of Coxiella burnetii.

Authors:  Hua-Wei Chen; Wei-Mei Ching
Journal:  Heliyon       Date:  2017-10-06
  8 in total

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