Literature DB >> 27580749

Nonhistone Lysine Methylation in the Regulation of Cancer Pathways.

Scott M Carlson1, Or Gozani1.   

Abstract

Proteins are regulated by an incredible array of posttranslational modifications (PTMs). Methylation of lysine residues on histone proteins is a PTM with well-established roles in regulating chromatin and epigenetic processes. The recent discovery that hundreds and likely thousands of nonhistone proteins are also methylated at lysine has opened a tremendous new area of research. Major cellular pathways involved in cancer, such as growth signaling and the DNA damage response, are regulated by lysine methylation. Although the field has developed quickly in recent years many fundamental questions remain to be addressed. We review the history and molecular functions of lysine methylation. We then discuss the enzymes that catalyze methylation of lysine residues, the enzymes that remove lysine methylation, and the cancer pathways known to be regulated by lysine methylation. The rest of the article focuses on two open questions that we suggest as a roadmap for future research. First is understanding the large number of candidate methyltransferase and demethylation enzymes whose enzymatic activity is not yet defined and which are potentially associated with cancer through genetic studies. Second is investigating the biological processes and cancer mechanisms potentially regulated by the multitude of lysine methylation sites that have been recently discovered.
Copyright © 2016 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2016        PMID: 27580749      PMCID: PMC5088510          DOI: 10.1101/cshperspect.a026435

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Med        ISSN: 2157-1422            Impact factor:   6.915


  112 in total

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2.  Detection of high incidence of K-ras oncogenes during human colon tumorigenesis.

Authors:  K Forrester; C Almoguera; K Han; W E Grizzle; M Perucho
Journal:  Nature       Date:  1987 May 28-Jun 3       Impact factor: 49.962

3.  A specific LSD1/KDM1A isoform regulates neuronal differentiation through H3K9 demethylation.

Authors:  Benoit Laurent; Lv Ruitu; Jernej Murn; Kristina Hempel; Ryan Ferrao; Yang Xiang; Shichong Liu; Benjamin A Garcia; Hao Wu; Feizhen Wu; Hanno Steen; Yang Shi
Journal:  Mol Cell       Date:  2015-02-12       Impact factor: 17.970

4.  A Proteomic Strategy Identifies Lysine Methylation of Splicing Factor snRNP70 by the SETMAR Enzyme.

Authors:  Scott M Carlson; Kaitlyn E Moore; Saumya M Sankaran; Nicolas Reynoird; Joshua E Elias; Or Gozani
Journal:  J Biol Chem       Date:  2015-03-20       Impact factor: 5.157

5.  Novel histone demethylase LSD1 inhibitors selectively target cancer cells with pluripotent stem cell properties.

Authors:  Jing Wang; Fei Lu; Qi Ren; Hong Sun; Zhengshuang Xu; Rongfeng Lan; Yuqing Liu; David Ward; Junmin Quan; Tao Ye; Hui Zhang
Journal:  Cancer Res       Date:  2011-10-05       Impact factor: 12.701

6.  Protein lysine methyltransferase G9a acts on non-histone targets.

Authors:  Philipp Rathert; Arunkumar Dhayalan; Marie Murakami; Xing Zhang; Raluca Tamas; Renata Jurkowska; Yasuhiko Komatsu; Yoichi Shinkai; Xiaodong Cheng; Albert Jeltsch
Journal:  Nat Chem Biol       Date:  2008-04-27       Impact factor: 15.040

7.  Modulation of p53 function by SET8-mediated methylation at lysine 382.

Authors:  Xiaobing Shi; Ioulia Kachirskaia; Hiroshi Yamaguchi; Lisandra E West; Hong Wen; Evelyn W Wang; Sucharita Dutta; Ettore Appella; Or Gozani
Journal:  Mol Cell       Date:  2007-08-17       Impact factor: 17.970

Review 8.  SET7/9 mediated methylation of non-histone proteins in mammalian cells.

Authors:  Sriharsa Pradhan; Hang Gyeong Chin; Pierre-Olivier Estève; Steven E Jacobsen
Journal:  Epigenetics       Date:  2009-08-06       Impact factor: 4.528

9.  Lysine methylation of VCP by a member of a novel human protein methyltransferase family.

Authors:  Stefan Kernstock; Erna Davydova; Magnus Jakobsson; Anders Moen; Solveig Pettersen; Gunhild M Mælandsmo; Wolfgang Egge-Jacobsen; Pål Ø Falnes
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

10.  A comprehensive survey of Ras mutations in cancer.

Authors:  Ian A Prior; Paul D Lewis; Carla Mattos
Journal:  Cancer Res       Date:  2012-05-15       Impact factor: 12.701

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  46 in total

1.  Identification of Rpl29 as a major substrate of the lysine methyltransferase Set7/9.

Authors:  Tewfik Hamidi; Anup Kumar Singh; Nicolas Veland; Vidyasiri Vemulapalli; Jianji Chen; Swanand Hardikar; Jianqiang Bao; Christopher J Fry; Vicky Yang; Kimberly A Lee; Ailan Guo; Cheryl H Arrowsmith; Mark T Bedford; Taiping Chen
Journal:  J Biol Chem       Date:  2018-06-29       Impact factor: 5.157

Review 2.  Approaches for the study of epigenetic modifications in the inner ear and related tissues.

Authors:  Bradley J Walters; Brandon C Cox
Journal:  Hear Res       Date:  2019-01-12       Impact factor: 3.208

Review 3.  Lysine Methylation Regulators Moonlighting outside the Epigenome.

Authors:  Evan M Cornett; Laure Ferry; Pierre-Antoine Defossez; Scott B Rothbart
Journal:  Mol Cell       Date:  2019-09-19       Impact factor: 17.970

Review 4.  Mechanisms of Nucleosome Dynamics In Vivo.

Authors:  Steven Henikoff
Journal:  Cold Spring Harb Perspect Med       Date:  2016-09-01       Impact factor: 6.915

5.  Characterization of SETD3 methyltransferase-mediated protein methionine methylation.

Authors:  Shaobo Dai; Matthew V Holt; John R Horton; Clayton B Woodcock; Anamika Patel; Xing Zhang; Nicolas L Young; Alex W Wilkinson; Xiaodong Cheng
Journal:  J Biol Chem       Date:  2020-06-05       Impact factor: 5.157

6.  Function of the MYND Domain and C-Terminal Region in Regulating the Subcellular Localization and Catalytic Activity of the SMYD Family Lysine Methyltransferase Set5.

Authors:  Deepika Jaiswal; Rashi Turniansky; James J Moresco; Sabeen Ikram; Ganesh Ramaprasad; Assefa Akinwole; Julie Wolf; John R Yates; Erin M Green
Journal:  Mol Cell Biol       Date:  2020-01-03       Impact factor: 4.272

7.  Quantitative analysis of global protein lysine methylation by mass spectrometry.

Authors:  Peder J Lund; Stephanie M Lehman; Benjamin A Garcia
Journal:  Methods Enzymol       Date:  2019-08-12       Impact factor: 1.600

Review 8.  Protein arginine methylation: a prominent modification and its demethylation.

Authors:  Juste Wesche; Sarah Kühn; Benedikt M Kessler; Maayan Salton; Alexander Wolf
Journal:  Cell Mol Life Sci       Date:  2017-03-31       Impact factor: 9.261

9.  Substrate docking-mediated specific and efficient lysine methylation by the SET domain-containing histone methyltransferase SETD7.

Authors:  Haiyang Liu; Zhiwei Li; Qingqing Yang; Wei Liu; Jun Wan; Jianchao Li; Mingjie Zhang
Journal:  J Biol Chem       Date:  2019-07-19       Impact factor: 5.157

10.  An engineered variant of SETD3 methyltransferase alters target specificity from histidine to lysine methylation.

Authors:  Shaobo Dai; John R Horton; Alex W Wilkinson; Or Gozani; Xing Zhang; Xiaodong Cheng
Journal:  J Biol Chem       Date:  2020-01-07       Impact factor: 5.157

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