| Literature DB >> 27483008 |
Francis Angira1, Benta Akoth1, Paul Omolo1, Valarie Opollo1, Scott Bornheimer2, Kevin Judge2, Henok Tilahun2, Beverly Lu2, Imelda Omana-Zapata2, Clement Zeh3.
Abstract
BACKGROUND: The BD FACSPresto™ Near-Patient CD4 Counter was developed to expand HIV/AIDS management in resource-limited settings. It measures absolute CD4 counts (AbsCD4), percent CD4 (%CD4), and hemoglobin (Hb) from a single drop of capillary or venous blood in approximately 23 minutes, with throughput of 10 samples per hour. We assessed the performance of the BD FACSPresto system, evaluating accuracy, stability, linearity, precision, and reference intervals using capillary and venous blood at KEMRI/CDC HIV-research laboratory, Kisumu, Kenya, and precision and linearity at BD Biosciences, California, USA.Entities:
Mesh:
Year: 2016 PMID: 27483008 PMCID: PMC4970792 DOI: 10.1371/journal.pone.0157939
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Clinical Evaluation of the BD FACSPresto™ Near Patient CD4 Counter Flowchart.
The clinical evaluation of the BD FACSPresto was carried out at KEMRI/CDC and BD Biosciences comprised of the five sub-studies depicted in the flowchart. KEMRI/CDC evaluated the FACSPresto system using venous and capillary blood specimens from subjects attending to the clinic for routine visit. Two analytical sub- studies using normal blood and process control materials were completed at BD Biosciences.
Accuracy Results by Specimen Type and Bins.
| Parameter | Specimen Type | Bins | N | Min | Max | Mean | SD | Mean %sim | %sim SD |
|---|---|---|---|---|---|---|---|---|---|
| 50–250 | 29 | 55 | 247 | 149.1 | 59.7 | 102.5 | 8.6 | ||
| 250–500 | 59 | 255 | 498 | 380.9 | 72 | 99.2 | 4.7 | ||
| 500–1,000 | 76 | 503 | 997 | 685.6 | 147.4 | 99.3 | 3.3 | ||
| 1,000–4,000 | 25 | 1,020 | 2,478 | 1,423.8 | 393.6 | 100.1 | 2.4 | ||
| Sub-total | 189 | ||||||||
| 50–250 | 12 | 69 | 242 | 154.5 | 60.8 | 108.7 | 10.3 | ||
| 250–500 | 54 | 262 | 494 | 382.1 | 65.3 | 102.5 | 6.7 | ||
| 500–1,000 | 68 | 510 | 998 | 703.7 | 137.4 | 103.8 | 5.7 | ||
| 1,000–4,000 | 28 | 1,003 | 2,474 | 1,397.5 | 459.5 | 102.7 | 6.4 | ||
| Sub-total | 162 | ||||||||
| 5–20 | 53 | 5.1 | 19.9 | 14.7 | 3.7 | 100.8 | 6 | ||
| 20–35 | 98 | 20.2 | 35 | 27.9 | 4.4 | 102.4 | 3 | ||
| 35–60 | 36 | 35.5 | 53.8 | 41.5 | 4.1 | 101.4 | 2 | ||
| Sub-total | 187 | ||||||||
| 5–20 | 48 | 5.9 | 19.8 | 14.9 | 3.6 | 99.5 | 4.6 | ||
| 20–35 | 88 | 20.2 | 34.9 | 27.4 | 4.5 | 100.7 | 3.8 | ||
| 35–60 | 24 | 35.1 | 56.2 | 40.4 | 5.1 | 100.9 | 2.5 | ||
| Sub-total | 160 | ||||||||
| 2–9 | 34 | 3 | 8.9 | 6.7 | 2.2 | 100.4 | 8 | ||
| 9–12 | 78 | 9 | 11.9 | 10.9 | 0.7 | 97.8 | 1.6 | ||
| 12–17 | 66 | 12 | 16.6 | 13.7 | 1.2 | 98.1 | 1.5 | ||
| 17–20 | 6 | 17.3 | 18.7 | 18.1 | 0.5 | 99.1 | 1.5 | ||
| Sub-total | 184 | ||||||||
| 2–9 | 18 | 4.7 | 8.9 | 7.8 | 1.4 | 100.8 | 3.8 | ||
| 9–12 | 70 | 9 | 11.9 | 10.8 | 0.8 | 98.9 | 2.1 | ||
| 12–17 | 73 | 12 | 16.9 | 13.7 | 1.3 | 99.5 | 2.5 | ||
| 17–20 | 1 | 17.1 | 17.1 | 17.1 | NA | 99.7 | NA | ||
| Sub-total | 162 | ||||||||
*Bins based on BD FACSPresto system results. The valid results from first replicate were used to generate the summary statistics.
Fig 2Bland-Altman Plots for AbsCD4, %CD4 and Hb in Venous and Capillary Blood.
Bias results are illustrated in the Bland-Altman plots with limits of agreement for venous blood (2A, 2C and 2E) on the left side and for capillary blood (2B, 2D and 2F) on the right side. Biases for AbsCD4 are show in 2A and 2B; for %CD4 in 2C and 2D and hemoglobin in 2E and 2F. The x-axis displays the average (AbsCD4, %CD4 or Hb) and the y-axis is the difference (AbsCD4, %CD4 or Hb).
Deming Regression, Bland-Altman Mean Bias and Mean Percent Similarity Results Comparison with Limits of Agreement.
| Specimen | Parameter | N | Mean %Bias (95%) CI of Mean Bias) | Bland-Altman Mean %Bias (95% LoA) | Mean %Similarity (95% CI of the Mean %sim) |
|---|---|---|---|---|---|
| 189 | -0.28(-1.46;0.91) | -0.78(-21.26;19.69) | 99.86(99.27;100.45) | ||
| 187 | 3.6(2.63;4.56) | 3.19(-14.01;20.40) | 101.80(101.32;102.28) | ||
| 184 | -3.16(-4.08;-2.23) | -3.53(-20.48;13.42) | 98.42(97.96;98.88) | ||
| 162 | 7.11(5.37;8.86) | 6.1(-17.34; 29.55) | 103.56(102.68;104.43) | ||
| 160 | 0.72(-0.3;1.74) | 0.41(-15.36;16.18) | 100.36(99.85;100.87) | ||
| 162 | -1.17(-1.85;-0.5) | -1.31(-11.49;8.86) | 99.41(99.08;99.85) |
Summary of the Deming Regression Results.
| Specimen | R2 | Slope (CI) | Intercept (CI) | |||
|---|---|---|---|---|---|---|
| 0.98 | 0.97 | (0.95,0.99) | 7.37 | (-0.03,14.76) | ||
| 0.96 | 1.03 | (1.00,1.05) | 0.13 | (-0.55,0.85) | ||
| 0.96 | 0.94 | (0.91,0.98) | 0.18 | (-0.27,0.64) | ||
| 0.97 | 1.03 | (0.99,1.07) | 13.47 | (-1.91,28.85) | ||
| 0.96 | 1.02 | (0.99,1.05) | -0.26 | (-1.03,0.49) | ||
| 0.94 | 0.98 | (0.94,1.02) | 0.08 | (-0.41,0.55) | ||
Deming Regression Predicted Accuracy Interval at Different Cutoffs.
| Type | Parameter | Decision Level | Bias (with 95% CI) | Percent (%) Bias (with 95% CI) |
|---|---|---|---|---|
| 200 | 1.7 (-3.8, 7.2) | 0.85 (-1.9, 3.6) | ||
| 350 | -2.5 (-7.7, 2.7) | -0.71 (-2.2, 0.77) | ||
| 500 | -6.8 (-12.8, -0.7) | -1.36 (-2.56, -0.14) | ||
| 750 | -13.8(-22.9, -4.8) | -1.84(-3.05, -0.64) | ||
| 15% | 0.55 (0.16, 0.94) | 3.67 (1.07, 6.27) | ||
| 20% | 0.69 (0.37, 1.01) | 3.45 (1.85, 5.05) | ||
| 25% | 0.83 (0.55, 1.11) | 3.32 (2.20, 4.44) | ||
| 4.5 | -0.07 (-0.36, 0.22) | -1.56 (-8.00, 4.89) | ||
| 10.5 | -0.40 (-0.52, -0.27) | -3.81 (-4.95, -2.57) | ||
| 17 | -0.76 (-0.89, -0.62) | -4.47 (-5.24, -3.65) | ||
| 200 | 19.6 (9.9, 29.4) | 9.8 (4.95,14.7) | ||
| 350 | 24.3 (16.5, 32.0) | 6.94 (4.71, 9.14) | ||
| 500 | 28.9 (19.5, 38.2) | 5.78 (3.90, 7.64) | ||
| 15% | 36.6(20.2, 53.0) | 4.9(2.7, 7.1) | ||
| 20% | -0.01 (-0.38, 0.36) | -0.07 (-2.53, 2.4) | ||
| 25% | 0.07 (-0.22, 0.37) | 0.35 (-1.10, 1.85) |
Venous AbsCD4 Comparison between BD FACSPresto and BD FACSCalibur Systems at Cutoff of 350 cells/μL.
| 44 | 2 | 46 | ||
| 6 | 137 | 143 | ||
| 50 | 139 | 189 | ||
| Overall Agreement | ||||
| Positive Agreement | ||||
| Negative Agreement | ||||
**Overall agreement is defined as the proportion of subjects in whom the new test and the non-reference standard give the same outcome.
***Positive agreement refers to the proportion of non-reference standard positive subjects in whom the new test is positive or ≤cutoff.
&Negative agreement is defined as the proportion of non-reference standard negative subjects in whom the new test is negative or >cutoff.
BD FACSPresto and BD FACSCalibur Agreement at Different Cutoffs.
| Overall | 99.5% | 95.8% | 96.3% | 99.5% | ||
| 95% CI | 97.1/ 99.9% | 91.9/ 97.8% | 92.6/ 98.2% | 97.1/ 99.9% | ||
| Positive Percent Agreement | 100.0% | 88.0% | 93.2% | 100.0% | ||
| Negative Percent Agreement | 99.4% | 98.6% | 99.0% | 98.0% | ||
| Overall | 98.80% | 94.40% | 95.1% | 95.1% | ||
| 95% CI | 95.6/ 99.7% | 89.8/ 97.1% | 90.6/ 97.5% | 90.6 97.5% | ||
| Positive Percent Agreement | 100.00% | 87.10% | 93.9% | 100.0% | ||
| Negative Percent Agreement | 98.7% | 96.2% | 95.8% | 84.3% | ||
| Overall | 93.1% | |||||
| 95% CI | 88.5/ 95.9% | |||||
| Positive Percent Agreement | 96.3% | |||||
| Negative Percent Agreement | 90.7% | |||||
| Overall | 90.1% | |||||
| 95% CI | 84.5/ 93.8% | |||||
| Positive Percent Agreement | 88.8% | |||||
| Negative Percent Agreement | 91.4% |
#CI of the overall agreements was calculated based on the Wilson Score Method.
Fig 3Comparison of Venous and Capillary Blood on the BD FACSPresto.
Comparison of venous and capillary Deming regression results are shown for AbsCD4 (A), %CD4 (B), and Hb (C) with R2 (%), intercept, and slope.
Time Zero Stability Results Summary by Specimen Type and Bins.
| Parameter | Specimen Type | Bins | N | Min | Max | Mean | SD |
|---|---|---|---|---|---|---|---|
| 50–250 | 7 | 54 | 238 | 158.3 | 67.9 | ||
| 250–500 | 17 | 252 | 491 | 383.9 | 83.2 | ||
| 500–1,000 | 30 | 510 | 976 | 704.1 | 149.6 | ||
| 1,000–4,000 | 4 | 1,191 | 1,969 | 1,644.8 | 326.3 | ||
| Sub-total | 58 | ||||||
| 50–250 | 4 | 61 | 171 | 122 | 52.4 | ||
| 250–500 | 12 | 265 | 462 | 366.3 | 64.1 | ||
| 500–1,000 | 25 | 505 | 994 | 712.6 | 144.9 | ||
| 1,000–4,000 | 6 | 1,049 | 2,461 | 1,433.7 | 540 | ||
| Sub-total | 47 | ||||||
| 5–20 | 17 | 5.1 | 19.9 | 13.6 | 5.2 | ||
| 20–35 | 29 | 20.7 | 33.5 | 27.6 | 3.8 | ||
| 35–60 | 14 | 35.9 | 54.8 | 40.9 | 5.2 | ||
| Sub-total | 60 | ||||||
| 5–20 | 13 | 5.3 | 19.7 | 14 | 4.6 | ||
| 20–35 | 22 | 20.3 | 33.9 | 27.8 | 4.1 | ||
| 35–60 | 11 | 35.6 | 55.8 | 40.1 | 5.8 | ||
| Sub-total | 46 | ||||||
| 2–9 | 11 | 4.8 | 8.7 | 7.3 | 1.2 | ||
| 9–12 | 14 | 9 | 11.5 | 10.5 | 0.9 | ||
| 12–17 | 26 | 12 | 15.4 | 13.4 | 0.9 | ||
| 17–20 | 5 | 17.8 | 19.1 | 18.2 | 0.5 | ||
| Sub-total | 56 | ||||||
| 2–9 | 11 | 4.5 | 8.9 | 7.5 | 1.3 | ||
| 9–12 | 14 | 9.4 | 11.9 | 10.8 | 0.9 | ||
| 12–17 | 23 | 12.1 | 16.3 | 13.9 | 1.1 | ||
| 17–20 | 0 | NA | NA | NA | NA | ||
| Sub-total | 47 | ||||||
Venous and Capillary Blood Stability Results.
| Specimen Type | Parameter | Time point (h/h) | N | Mean %Bias | SD | 95% Low CI | 95% Upper CI | |
|---|---|---|---|---|---|---|---|---|
| V1 | (0/2) | 57 | 3.40 | 7.82 | 1.67 | 5.13 | ||
| V2 | (22/0) | 53 | 1.36 | 14.30 | -1.93 | 4.65 | ||
| V3 | (22/2) | 54 | 6.17 | 12.24 | 3.38 | 8.96 | ||
| V1 | (0/2) | 59 | 3.93 | 11.16 | 1.50 | 6.35 | ||
| V2 | (22/0) | 54 | 4.32 | 11.78 | 1.64 | 7.00 | ||
| V3 | (22/2) | 55 | 9.21 | 12.44 | 6.41 | 12.02 | ||
| V1 | (0/2) | 55 | 2.06 | 3.75 | 1.21 | 2.90 | ||
| V2 | (22/0) | 52 | 0.33 | 3.96 | -0.59 | 1.25 | ||
| V3 | (22/2) | 54 | 1.88 | 4.66 | 0.82 | 2.94 | ||
| C1 | (0/2) | 46 | 1.49 | 10.38 | -1.08 | 4.06 | ||
| C1 | (0/2) | 44 | 5.55 | 7.82 | 3.56 | 7.53 | ||
| C1 | (0/2) | 47 | 1.52 | 5.44 | 0.19 | 2.86 | ||
^Mean %Bias is calculated with respect to a time point zero reference (V0 or C0).
Precision Results—Twenty-run Repeatability.
| Parameter | Sample | Mean | N | SD | SD—95% Upper CI | %CV | CV- 95% Upper CI |
|---|---|---|---|---|---|---|---|
| 155.1 | 20 | 8.97 | 12.29 | 5.78 | 7.37 | ||
| 926.6 | 20 | 24.04 | 32.95 | 2.59 | 3.3 | ||
| 12.77 | 20 | 0.73 | 1.01 | 5.74 | 7.32 | ||
| 43.99 | 20 | 0.67 | 0.92 | 1.53 | 1.95 | ||
| 6.95 | 20 | 0.16 | 0.22 | 2.26 | 2.88 | ||
| 12.99 | 20 | 0.14 | 0.19 | 1.09 | 1.38 |
Precision Results—Within-run and Total Precision.
| Parameter | Sample | Precision | Mean | DF | SD | SD—95% Upper CI | %CV | %CV—95% Upper CI |
|---|---|---|---|---|---|---|---|---|
| Low | Within Run | 155.96 | 42 | 10.6 | 12.95 | 6.79 | 8.03 | |
| Total | 155.96 | 83 | 10.6 | 12.16 | 6.79 | 7.67 | ||
| Normal | Within Run | 940.93 | 42 | 20.55 | 25.1 | 2.18 | 2.58 | |
| Total | 940.93 | 83 | 31.02 | 35.61 | 3.3 | 3.72 | ||
| Low | Within Run | 12.55 | 42 | 0.75 | 0.92 | 5.98 | 7.07 | |
| Total | 12.55 | 83 | 0.75 | 0.86 | 5.98 | 6.75 | ||
| Normal | Within Run | 43.9 | 42 | 0.69 | 0.85 | 1.58 | 1.87 | |
| Total | 43.9 | 83 | 0.76 | 0.88 | 1.74 | 1.96 | ||
| Level 1 | Within Run | 6.9 | 42 | 0.17 | 0.2 | 2.42 | 2.86 | |
| Total | 6.9 | 83 | 0.17 | 0.19 | 2.42 | 2.73 | ||
| Level 2 | Within Run | 12.74 | 42 | 0.19 | 0.23 | 1.46 | 1.72 | |
| Total | 12.74 | 83 | 0.19 | 0.22 | 1.52 | 1.72 | ||
| Level 3 | Within Run | 16.87 | 42 | 0.18 | 0.22 | 1.07 | 1.27 | |
| Total | 16.87 | 83 | 0.19 | 0.22 | 1.14 | 1.28 |
DF = degrees of freedom, refers to the number of independent values. In the precision study, the total tubes collected were 21 (days) x 2 (runs) x 2 (replicates). Therefore, the total degree of freedom is 84–1 = 83. Within-run degrees of freedom are 21 (days) x 2 (runs) = 42.
SD = standard deviation.
%CV = percent coefficient of variation.
Linearity Range.
| Parameter | Overall %CV | R2 | Final Range | Product Claim Range |
|---|---|---|---|---|
| 4.36 | 0.997 | 42–4,897 | 50–4,000 | |
| 2.55 | 0.999 | 182–11,704 | 20–10,000 | |
| 4.60 | 0.999 | 2–24 | 2–20 |
!Overall %CV = the mean of the %CV across all the triplicate measurements at each linearity interval.
Reference Intervals Partitioned by Gender.
| Blood Type | Subset | Gender | N | Mean | Reference Interval |
|---|---|---|---|---|---|
| Male | 76 | 881 | 469–1,437 | ||
| Female | 75 | 1,054 | 503–1,679 | ||
| Male | 76 | 39.99 | 29.15–52.54 | ||
| Female | 75 | 42.95 | 30.66–54.67 | ||
| Male | 76 | 14.17 | 10.9–16.8 | ||
| Female | 75 | 12.2 | 8.2–15 | ||
| Male | 76 | 930 | 510–1,552 | ||
| Female | 74 | 1,122 | 508–1,851 | ||
| Male | 76 | 37.92 | 26.86–49.39 | ||
| Female | 74 | 41.37 | 30.56–53.16 | ||
| Male | 76 | 14.56 | 11.2–17.5 | ||
| Female | 75 | 12.48 | 8.5–14.7 |