Literature DB >> 27458907

Dimensionality reduction in neuroscience.

Rich Pang1, Benjamin J Lansdell2, Adrienne L Fairhall3.   

Abstract

The nervous system extracts information from its environment and distributes and processes that information to inform and drive behaviour. In this task, the nervous system faces a type of data analysis problem, for, while a visual scene may be overflowing with information, reaching for the television remote before us requires extraction of only a relatively small fraction of that information. We could care about an almost infinite number of visual stimulus patterns, but we don't: we distinguish two actors' faces with ease but two different images of television static with significant difficulty. Equally, we could respond with an almost infinite number of movements, but we don't: the motions executed to pick up the remote are highly stereotyped and related to many other grasping motions. If we were to look at what was going on inside the brain during this task, we would find populations of neurons whose electrical activity was highly structured and correlated with the images on the screen and the action of localizing and picking up the remote.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Year:  2016        PMID: 27458907      PMCID: PMC6132250          DOI: 10.1016/j.cub.2016.05.029

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  13 in total

1.  Analyzing neural responses to natural signals: maximally informative dimensions.

Authors:  Tatyana Sharpee; Nicole C Rust; William Bialek
Journal:  Neural Comput       Date:  2004-02       Impact factor: 2.026

2.  Extracting spatial-temporal coherent patterns in large-scale neural recordings using dynamic mode decomposition.

Authors:  Bingni W Brunton; Lise A Johnson; Jeffrey G Ojemann; J Nathan Kutz
Journal:  J Neurosci Methods       Date:  2015-10-31       Impact factor: 2.390

3.  Transient dynamics versus fixed points in odor representations by locust antennal lobe projection neurons.

Authors:  Ofer Mazor; Gilles Laurent
Journal:  Neuron       Date:  2005-11-23       Impact factor: 17.173

4.  The role of sensory network dynamics in generating a motor program.

Authors:  Rafael Levi; Pablo Varona; Yuri I Arshavsky; Mikhail I Rabinovich; Allen I Selverston
Journal:  J Neurosci       Date:  2005-10-19       Impact factor: 6.167

5.  Selectivity for multiple stimulus features in retinal ganglion cells.

Authors:  Adrienne L Fairhall; C Andrew Burlingame; Ramesh Narasimhan; Robert A Harris; Jason L Puchalla; Michael J Berry
Journal:  J Neurophysiol       Date:  2006-08-16       Impact factor: 2.714

6.  Intensity versus identity coding in an olfactory system.

Authors:  Mark Stopfer; Vivek Jayaraman; Gilles Laurent
Journal:  Neuron       Date:  2003-09-11       Impact factor: 17.173

Review 7.  From the neuron doctrine to neural networks.

Authors:  Rafael Yuste
Journal:  Nat Rev Neurosci       Date:  2015-07-08       Impact factor: 34.870

8.  Spatio-temporal correlations and visual signalling in a complete neuronal population.

Authors:  Jonathan W Pillow; Jonathon Shlens; Liam Paninski; Alexander Sher; Alan M Litke; E J Chichilnisky; Eero P Simoncelli
Journal:  Nature       Date:  2008-07-23       Impact factor: 49.962

9.  Second order dimensionality reduction using minimum and maximum mutual information models.

Authors:  Jeffrey D Fitzgerald; Ryan J Rowekamp; Lawrence C Sincich; Tatyana O Sharpee
Journal:  PLoS Comput Biol       Date:  2011-10-27       Impact factor: 4.475

10.  Data-driven inference of network connectivity for modeling the dynamics of neural codes in the insect antennal lobe.

Authors:  Eli Shlizerman; Jeffrey A Riffell; J Nathan Kutz
Journal:  Front Comput Neurosci       Date:  2014-08-13       Impact factor: 2.380

View more
  18 in total

1.  Hierarchical differences in population coding within auditory cortex.

Authors:  Joshua D Downer; Mamiko Niwa; Mitchell L Sutter
Journal:  J Neurophysiol       Date:  2017-04-26       Impact factor: 2.714

Review 2.  Computational Neuroethology: A Call to Action.

Authors:  Sandeep Robert Datta; David J Anderson; Kristin Branson; Pietro Perona; Andrew Leifer
Journal:  Neuron       Date:  2019-10-09       Impact factor: 17.173

3.  Ultra-parallel label-free optophysiology of neural activity.

Authors:  Rishyashring R Iyer; Yuan-Zhi Liu; Carlos A Renteria; Brian E Tibble; Honggu Choi; Mantas Žurauskas; Stephen A Boppart
Journal:  iScience       Date:  2022-04-27

4.  Dictionary Learning for Spontaneous Neural Activity Modeling.

Authors:  Eirini Troullinou; Grigorios Tsagkatakis; Ganna Palagina; Maria Papadopouli; Stelios Manolis Smirnakis; Panagiotis Tsakalides
Journal:  Proc Eur Signal Process Conf EUSIPCO       Date:  2017-10-26

5.  Mapping circuit dynamics during function and dysfunction.

Authors:  Srinivas Gorur-Shandilya; Elizabeth M Cronin; Anna C Schneider; Sara Ann Haddad; Philipp Rosenbaum; Dirk Bucher; Farzan Nadim; Eve Marder
Journal:  Elife       Date:  2022-03-18       Impact factor: 8.713

Review 6.  Large-scale neural recordings call for new insights to link brain and behavior.

Authors:  Anne E Urai; Brent Doiron; Andrew M Leifer; Anne K Churchland
Journal:  Nat Neurosci       Date:  2022-01-03       Impact factor: 28.771

7.  Large-Scale and Multiscale Networks in the Rodent Brain during Novelty Exploration.

Authors:  Michael X Cohen; Bernhard Englitz; Arthur S C França
Journal:  eNeuro       Date:  2021-05-12

8.  Bridging neuronal correlations and dimensionality reduction.

Authors:  Akash Umakantha; Rudina Morina; Benjamin R Cowley; Adam C Snyder; Matthew A Smith; Byron M Yu
Journal:  Neuron       Date:  2021-07-21       Impact factor: 18.688

9.  Dynamical networks: Finding, measuring, and tracking neural population activity using network science.

Authors:  Mark D Humphries
Journal:  Netw Neurosci       Date:  2017-12-01

10.  Uremic Solute-Aryl Hydrocarbon Receptor-Tissue Factor Axis Associates with Thrombosis after Vascular Injury in Humans.

Authors:  Vijaya B Kolachalama; Moshe Shashar; Faisal Alousi; Sowmya Shivanna; Keshab Rijal; Mostafa E Belghasem; Joshua Walker; Shinobu Matsuura; Gary H Chang; C Michael Gibson; Laura M Dember; Jean M Francis; Katya Ravid; Vipul C Chitalia
Journal:  J Am Soc Nephrol       Date:  2018-01-17       Impact factor: 14.978

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.