Literature DB >> 18650810

Spatio-temporal correlations and visual signalling in a complete neuronal population.

Jonathan W Pillow1, Jonathon Shlens, Liam Paninski, Alexander Sher, Alan M Litke, E J Chichilnisky, Eero P Simoncelli.   

Abstract

Statistical dependencies in the responses of sensory neurons govern both the amount of stimulus information conveyed and the means by which downstream neurons can extract it. Although a variety of measurements indicate the existence of such dependencies, their origin and importance for neural coding are poorly understood. Here we analyse the functional significance of correlated firing in a complete population of macaque parasol retinal ganglion cells using a model of multi-neuron spike responses. The model, with parameters fit directly to physiological data, simultaneously captures both the stimulus dependence and detailed spatio-temporal correlations in population responses, and provides two insights into the structure of the neural code. First, neural encoding at the population level is less noisy than one would expect from the variability of individual neurons: spike times are more precise, and can be predicted more accurately when the spiking of neighbouring neurons is taken into account. Second, correlations provide additional sensory information: optimal, model-based decoding that exploits the response correlation structure extracts 20% more information about the visual scene than decoding under the assumption of independence, and preserves 40% more visual information than optimal linear decoding. This model-based approach reveals the role of correlated activity in the retinal coding of visual stimuli, and provides a general framework for understanding the importance of correlated activity in populations of neurons.

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Year:  2008        PMID: 18650810      PMCID: PMC2684455          DOI: 10.1038/nature07140

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  24 in total

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Authors:  Y Dan; J M Alonso; W M Usrey; R C Reid
Journal:  Nat Neurosci       Date:  1998-10       Impact factor: 24.884

2.  A point process framework for relating neural spiking activity to spiking history, neural ensemble, and extrinsic covariate effects.

Authors:  Wilson Truccolo; Uri T Eden; Matthew R Fellows; John P Donoghue; Emery N Brown
Journal:  J Neurophysiol       Date:  2004-09-08       Impact factor: 2.714

3.  Correlated firing in rabbit retinal ganglion cells.

Authors:  S H DeVries
Journal:  J Neurophysiol       Date:  1999-02       Impact factor: 2.714

4.  Maximum likelihood estimation of cascade point-process neural encoding models.

Authors:  Liam Paninski
Journal:  Network       Date:  2004-11       Impact factor: 1.273

5.  Fidelity of the ensemble code for visual motion in primate retina.

Authors:  E S Frechette; A Sher; M I Grivich; D Petrusca; A M Litke; E J Chichilnisky
Journal:  J Neurophysiol       Date:  2004-12-29       Impact factor: 2.714

6.  Decoding visual information from a population of retinal ganglion cells.

Authors:  D K Warland; P Reinagel; M Meister
Journal:  J Neurophysiol       Date:  1997-11       Impact factor: 2.714

7.  The variable discharge of cortical neurons: implications for connectivity, computation, and information coding.

Authors:  M N Shadlen; W T Newsome
Journal:  J Neurosci       Date:  1998-05-15       Impact factor: 6.167

8.  Parasol and midget ganglion cells of the primate retina.

Authors:  M Watanabe; R W Rodieck
Journal:  J Comp Neurol       Date:  1989-11-15       Impact factor: 3.215

Review 9.  Correlated firing of retinal ganglion cells.

Authors:  D N Mastronarde
Journal:  Trends Neurosci       Date:  1989-02       Impact factor: 13.837

10.  Synergy, redundancy, and independence in population codes, revisited.

Authors:  Peter E Latham; Sheila Nirenberg
Journal:  J Neurosci       Date:  2005-05-25       Impact factor: 6.709

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  471 in total

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Journal:  Neural Comput       Date:  2017-08-04       Impact factor: 2.026

Review 2.  The Role of the Lateral Intraparietal Area in (the Study of) Decision Making.

Authors:  Alexander C Huk; Leor N Katz; Jacob L Yates
Journal:  Annu Rev Neurosci       Date:  2017-07-25       Impact factor: 12.449

3.  Accounting for network effects in neuronal responses using L1 regularized point process models.

Authors:  Ryan C Kelly; Robert E Kass; Matthew A Smith; Tai Sing Lee
Journal:  Adv Neural Inf Process Syst       Date:  2010

4.  Decorrelation and efficient coding by retinal ganglion cells.

Authors:  Xaq Pitkow; Markus Meister
Journal:  Nat Neurosci       Date:  2012-03-11       Impact factor: 24.884

5.  A triplet spike-timing-dependent plasticity model generalizes the Bienenstock-Cooper-Munro rule to higher-order spatiotemporal correlations.

Authors:  Julijana Gjorgjieva; Claudia Clopath; Juliette Audet; Jean-Pascal Pfister
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-11       Impact factor: 11.205

6.  Neural coding properties based on spike timing and pattern correlation of retinal ganglion cells.

Authors:  Han-Yan Gong; Ying-Ying Zhang; Pei-Ji Liang; Pu-Ming Zhang
Journal:  Cogn Neurodyn       Date:  2010-06-29       Impact factor: 5.082

7.  The accuracy of membrane potential reconstruction based on spiking receptive fields.

Authors:  Deepankar Mohanty; Benjamin Scholl; Nicholas J Priebe
Journal:  J Neurophysiol       Date:  2012-01-25       Impact factor: 2.714

8.  Deep Learning Models of the Retinal Response to Natural Scenes.

Authors:  Lane T McIntosh; Niru Maheswaranathan; Aran Nayebi; Surya Ganguli; Stephen A Baccus
Journal:  Adv Neural Inf Process Syst       Date:  2016

9.  Modeling task-specific neuronal ensembles improves decoding of grasp.

Authors:  Ryan J Smith; Alcimar B Soares; Adam G Rouse; Marc H Schieber; Nitish V Thakor
Journal:  J Neural Eng       Date:  2018-02-02       Impact factor: 5.379

Review 10.  Technologies for imaging neural activity in large volumes.

Authors:  Na Ji; Jeremy Freeman; Spencer L Smith
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

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