Literature DB >> 27412881

Evolutionary Ecology of Prokaryotic Immune Mechanisms.

Stineke van Houte1, Angus Buckling1, Edze R Westra2.   

Abstract

Bacteria have a range of distinct immune strategies that provide protection against bacteriophage (phage) infections. While much has been learned about the mechanism of action of these defense strategies, it is less clear why such diversity in defense strategies has evolved. In this review, we discuss the short- and long-term costs and benefits of the different resistance strategies and, hence, the ecological conditions that are likely to favor the different strategies alone and in combination. Finally, we discuss some of the broader consequences, beyond resistance to phage and other genetic elements, resulting from the operation of different immune strategies.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27412881      PMCID: PMC4981670          DOI: 10.1128/MMBR.00011-16

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  252 in total

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Journal:  Nat Rev Microbiol       Date:  2010-03-29       Impact factor: 60.633

2.  Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage.

Authors:  Yu-Ren Yuan; Yi Pei; Jin-Biao Ma; Vitaly Kuryavyi; Maria Zhadina; Gunter Meister; Hong-Ying Chen; Zbigniew Dauter; Thomas Tuschl; Dinshaw J Patel
Journal:  Mol Cell       Date:  2005-08-05       Impact factor: 17.970

3.  Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog.

Authors:  Takuo Osawa; Hideko Inanaga; Chikara Sato; Tomoyuki Numata
Journal:  Mol Cell       Date:  2015-04-23       Impact factor: 17.970

4.  Strong bias in the bacterial CRISPR elements that confer immunity to phage.

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Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

Review 5.  Bacteria-virus coevolution.

Authors:  Angus Buckling; Michael Brockhurst
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

6.  Adaptation in bacterial CRISPR-Cas immunity can be driven by defective phages.

Authors:  Alexander P Hynes; Manuela Villion; Sylvain Moineau
Journal:  Nat Commun       Date:  2014-07-24       Impact factor: 14.919

7.  Lytic to temperate switching of viral communities.

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Journal:  Nature       Date:  2016-03-16       Impact factor: 49.962

8.  Degradation of Phage Transcripts by CRISPR-Associated RNases Enables Type III CRISPR-Cas Immunity.

Authors:  Wenyan Jiang; Poulami Samai; Luciano A Marraffini
Journal:  Cell       Date:  2016-02-04       Impact factor: 41.582

9.  Superinfection exclusion reveals heteroimmunity between Pseudomonas aeruginosa temperate phages.

Authors:  In-Young Chung; Hee-Won Bae; Hye-Jung Jang; Bi-o Kim; You-Hee Cho
Journal:  J Microbiol       Date:  2014-05-29       Impact factor: 3.422

10.  Effect of protein A on adsorption of bacteriophages to Staphylococcus aureus.

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Journal:  J Virol       Date:  1974-08       Impact factor: 5.103

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  91 in total

1.  Do cells use passwords in cell-state transitions? Is cell signaling sometimes encrypted?

Authors:  Alex Root
Journal:  Theory Biosci       Date:  2019-06-07       Impact factor: 1.919

Review 2.  Adaptive suicide: is a kin-selected driver of fatal behaviours likely?

Authors:  Rosalind K Humphreys; Graeme D Ruxton
Journal:  Biol Lett       Date:  2019-02-28       Impact factor: 3.703

3.  The ecology and evolution of microbial CRISPR-Cas adaptive immune systems.

Authors:  Edze R Westra; Stineke van Houte; Sylvain Gandon; Rachel Whitaker
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-05-13       Impact factor: 6.237

4.  CRISPR evolution and bacteriophage persistence in the context of population bottlenecks.

Authors:  Jack Common; Edze R Westra
Journal:  RNA Biol       Date:  2019-02-17       Impact factor: 4.652

5.  Selective Maintenance of Multiple CRISPR Arrays Across Prokaryotes.

Authors:  Jake L Weissman; William F Fagan; Philip L F Johnson
Journal:  CRISPR J       Date:  2018-12

6.  The Rcs stress response inversely controls surface and CRISPR-Cas adaptive immunity to discriminate plasmids and phages.

Authors:  Leah M Smith; Simon A Jackson; Lucia M Malone; James E Ussher; Paul P Gardner; Peter C Fineran
Journal:  Nat Microbiol       Date:  2021-01-04       Impact factor: 17.745

Review 7.  Mechanisms and consequences of diversity-generating immune strategies.

Authors:  Edze R Westra; David Sünderhauf; Mariann Landsberger; Angus Buckling
Journal:  Nat Rev Immunol       Date:  2017-08-07       Impact factor: 53.106

Review 8.  Ménage à trois in the human gut: interactions between host, bacteria and phages.

Authors:  Mohammadali Khan Mirzaei; Corinne F Maurice
Journal:  Nat Rev Microbiol       Date:  2017-05-02       Impact factor: 60.633

9.  A genomic investigation of ecological differentiation between free-living and Drosophila-associated bacteria.

Authors:  Nathan J Winans; Alec Walter; Bessem Chouaia; John M Chaston; Angela E Douglas; Peter D Newell
Journal:  Mol Ecol       Date:  2017-07-24       Impact factor: 6.185

10.  Diversity and classification of cyclic-oligonucleotide-based anti-phage signalling systems.

Authors:  Adi Millman; Sarah Melamed; Gil Amitai; Rotem Sorek
Journal:  Nat Microbiol       Date:  2020-08-24       Impact factor: 17.745

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