Literature DB >> 27325097

A synthetic molecular system capable of mirror-image genetic replication and transcription.

Zimou Wang1, Weiliang Xu2, Lei Liu2, Ting F Zhu1.   

Abstract

The overwhelmingly homochiral nature of life has left a puzzle as to whether mirror-image biological systems based on a chirally inverted version of molecular machinery could also have existed. Here we report that two key steps in the central dogma of molecular biology, the template-directed polymerization of DNA and transcription into RNA, can be catalysed by a chemically synthesized D-amino acid polymerase on an L-DNA template. We also show that two chirally mirrored versions of the 174-residue African swine fever virus polymerase X could operate in a racemic mixture without significant enantiomeric cross-inhibition to the activity of each other. Furthermore, we demonstrate that a functionally active L-DNAzyme could be enzymatically produced using the D-amino acid polymerase. The establishment of such molecular systems with an opposite handedness highlights the potential to exploit enzymatically produced mirror-image biomolecules as research and therapeutic tools.

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Year:  2016        PMID: 27325097     DOI: 10.1038/nchem.2517

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  33 in total

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Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

2.  Characterization of an African swine fever virus 20-kDa DNA polymerase involved in DNA repair.

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Journal:  J Biol Chem       Date:  1997-12-05       Impact factor: 5.157

3.  Stereoisomers of deoxynucleoside 5'-triphosphates as substrates for template-dependent and -independent DNA polymerases.

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Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

4.  Polymerase mu is a DNA-directed DNA/RNA polymerase.

Authors:  Stephanie A Nick McElhinny; Dale A Ramsden
Journal:  Mol Cell Biol       Date:  2003-04       Impact factor: 4.272

5.  Stereospecificity of human DNA polymerases alpha, beta, gamma, delta and epsilon, HIV-reverse transcriptase, HSV-1 DNA polymerase, calf thymus terminal transferase and Escherichia coli DNA polymerase I in recognizing D- and L-thymidine 5'-triphosphate as substrate.

Authors:  F Focher; G Maga; A Bendiscioli; M Capobianco; F Colonna; A Garbesi; S Spadari
Journal:  Nucleic Acids Res       Date:  1995-08-11       Impact factor: 16.971

6.  Chiral symmetry breaking in sodium chlorate crystallizaton.

Authors:  D K Kondepudi; R J Kaufman; N Singh
Journal:  Science       Date:  1990-11-16       Impact factor: 47.728

7.  Synthetic genetic polymers capable of heredity and evolution.

Authors:  Vitor B Pinheiro; Alexander I Taylor; Christopher Cozens; Mikhail Abramov; Marleen Renders; Su Zhang; John C Chaput; Jesper Wengel; Sew-Yeu Peak-Chew; Stephen H McLaughlin; Piet Herdewijn; Philipp Holliger
Journal:  Science       Date:  2012-04-20       Impact factor: 47.728

8.  Structural basis for the targeting of complement anaphylatoxin C5a using a mixed L-RNA/L-DNA aptamer.

Authors:  Laure Yatime; Christian Maasch; Kai Hoehlig; Sven Klussmann; Gregers R Andersen; Axel Vater
Journal:  Nat Commun       Date:  2015-04-22       Impact factor: 14.919

9.  Spiegelzymes® mirror-image hammerhead ribozymes and mirror-image DNAzymes, an alternative to siRNAs and microRNAs to cleave mRNAs in vivo?

Authors:  Eliza Wyszko; Florian Mueller; Marta Gabryelska; Angelika Bondzio; Mariusz Popenda; Jan Barciszewski; Volker A Erdmann
Journal:  PLoS One       Date:  2014-01-29       Impact factor: 3.240

10.  Small, highly active DNAs that hydrolyze DNA.

Authors:  Hongzhou Gu; Kazuhiro Furukawa; Zasha Weinberg; Daniel F Berenson; Ronald R Breaker
Journal:  J Am Chem Soc       Date:  2013-06-06       Impact factor: 15.419

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  25 in total

Review 1.  Beyond DNA and RNA: The Expanding Toolbox of Synthetic Genetics.

Authors:  Alexander I Taylor; Gillian Houlihan; Philipp Holliger
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-06-03       Impact factor: 10.005

Review 2.  General lack of structural characterization of chemically synthesized long peptides.

Authors:  Jean A Boutin; André L Tartar; Alain van Dorsselaer; Hubert Vaudry
Journal:  Protein Sci       Date:  2019-03-25       Impact factor: 6.725

Review 3.  Novel protein science enabled by total chemical synthesis.

Authors:  Stephen B H Kent
Journal:  Protein Sci       Date:  2018-12-18       Impact factor: 6.725

4.  Mirror-image enzyme copies looking-glass DNA.

Authors:  Mark Peplow
Journal:  Nature       Date:  2016-05-19       Impact factor: 49.962

Review 5.  Aligator: A computational tool for optimizing total chemical synthesis of large proteins.

Authors:  Michael T Jacobsen; Patrick W Erickson; Michael S Kay
Journal:  Bioorg Med Chem       Date:  2017-06-03       Impact factor: 3.641

6.  D-Amino acid substituted peptides as potential alternatives of homochiral L-configurations.

Authors:  Jianxun Shen
Journal:  Amino Acids       Date:  2021-02-04       Impact factor: 3.520

Review 7.  Engineering Polymerases for New Functions.

Authors:  Timothy A Coulther; Hannah R Stern; Penny J Beuning
Journal:  Trends Biotechnol       Date:  2019-04-16       Impact factor: 19.536

Review 8.  Mirror-Image Oligonucleotides: History and Emerging Applications.

Authors:  Brian E Young; Nandini Kundu; Jonathan T Sczepanski
Journal:  Chemistry       Date:  2019-04-26       Impact factor: 5.236

9.  Directed evolution and selection of biostable L-DNA aptamers with a mirror-image DNA polymerase.

Authors:  Ji Chen; Mengyin Chen; Ting F Zhu
Journal:  Nat Biotechnol       Date:  2022-06-06       Impact factor: 54.908

10.  Removable Backbone Modification (RBM) Strategy for the Chemical Synthesis of Hydrophobic Peptides/Proteins.

Authors:  Dong-Liang Huang; Ying Li; Ji-Shen Zheng
Journal:  Methods Mol Biol       Date:  2022
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