Literature DB >> 30851143

General lack of structural characterization of chemically synthesized long peptides.

Jean A Boutin1, André L Tartar2, Alain van Dorsselaer3, Hubert Vaudry4.   

Abstract

Many peptide chemistry scientists have been reporting extremely interesting work on the basis of chemical peptides for which the only characterization was their purity, mass, and biological activity. It seems slightly overenthusiastic, as many of these structures should be thoroughly characterized first to demonstrate the uniqueness of the structure, as opposed to the uniqueness of the sequence. Among the peptides of identical sequences in the final chemical preparation, what amount of well-folded peptide supports the measured activity? The activity of a peptide preparation cannot prove the purity of the desired peptide. Therefore, greater care should be taken in characterizing peptides, particularly those coming from chemical synthesis. At a time when the pharmaceutical industry is changing its paradigm by moving substantially from small molecules to biologics to better serve patients' needs, it is important to understand the limitations of the descriptions of these products and to start to apply the same "good laboratory practices" to our peptide research. Here, we attempt to delineate how synthetic peptides are described and characterized and what will be needed to describe them in regards to how they are well-folded and homogeneous in their tertiary structure. Older studies were done when the tools were not yet discovered, but more recent publications are still lacking proper descriptions of these peptides. Modern tools of analysis are capable of segregating folded and unfolded peptides, even if the preparation is biologically active.
© 2019 The Protein Society.

Entities:  

Keywords:  characterization; peptides; solid-phase synthesis; structure

Mesh:

Substances:

Year:  2019        PMID: 30851143      PMCID: PMC6459998          DOI: 10.1002/pro.3601

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  101 in total

1.  Structure-activity relationship studies of melanin-concentrating hormone (MCH)-related peptide ligands at SLC-1, the human MCH receptor.

Authors:  V Audinot; P Beauverger; C Lahaye; T Suply; M Rodriguez; C Ouvry; V Lamamy; J Imbert; H Rique; J L Nahon; J P Galizzi; E Canet; N Levens; J L Fauchere; J A Boutin
Journal:  J Biol Chem       Date:  2001-01-18       Impact factor: 5.157

Review 2.  Large-scale manufacture of peptide therapeutics by chemical synthesis.

Authors:  Brian L Bray
Journal:  Nat Rev Drug Discov       Date:  2003-07       Impact factor: 84.694

3.  Total chemical synthesis of a 304 amino acid K48-linked tetraubiquitin protein.

Authors:  K S Ajish Kumar; Sudhir N Bavikar; Liat Spasser; Tal Moyal; Shimrit Ohayon; Ashraf Brik
Journal:  Angew Chem Int Ed Engl       Date:  2011-05-18       Impact factor: 15.336

Review 4.  Native chemical ligation in protein synthesis and semi-synthesis.

Authors:  Anne C Conibear; Emma E Watson; Richard J Payne; Christian F W Becker
Journal:  Chem Soc Rev       Date:  2018-11-12       Impact factor: 54.564

Review 5.  Non-protein biologic therapeutics.

Authors:  Susan T Sharfstein
Journal:  Curr Opin Biotechnol       Date:  2017-12-28       Impact factor: 9.740

Review 6.  Peptide chemistry toolbox - Transforming natural peptides into peptide therapeutics.

Authors:  Miloš Erak; Kathrin Bellmann-Sickert; Sylvia Els-Heindl; Annette G Beck-Sickinger
Journal:  Bioorg Med Chem       Date:  2018-01-31       Impact factor: 3.641

7.  Mass Spectrometry and Ion Mobility Characterization of Bioactive Peptide-Synthetic Polymer Conjugates.

Authors:  Ahlam Alalwiat; Wen Tang; Selim Gerişlioğlu; Matthew L Becker; Chrys Wesdemiotis
Journal:  Anal Chem       Date:  2016-12-27       Impact factor: 6.986

Review 8.  Protein conjugation with genetically encoded unnatural amino acids.

Authors:  Chan Hyuk Kim; Jun Y Axup; Peter G Schultz
Journal:  Curr Opin Chem Biol       Date:  2013-05-09       Impact factor: 8.822

9.  A de novo peptide hexamer with a mutable channel.

Authors:  Nathan R Zaccai; Bertie Chi; Andrew R Thomson; Aimee L Boyle; Gail J Bartlett; Marc Bruning; Noah Linden; Richard B Sessions; Paula J Booth; R Leo Brady; Derek N Woolfson
Journal:  Nat Chem Biol       Date:  2011-10-30       Impact factor: 15.040

10.  Conformational flexibility determines selectivity and antibacterial, antiplasmodial, and anticancer potency of cationic α-helical peptides.

Authors:  Louic S Vermeer; Yun Lan; Vincenzo Abbate; Emrah Ruh; Tam T Bui; Louise J Wilkinson; Tokuwa Kanno; Elmira Jumagulova; Justyna Kozlowska; Jayneil Patel; Caitlin A McIntyre; W C Yam; Gilman Siu; R Andrew Atkinson; Jenny K W Lam; Sukhvinder S Bansal; Alex F Drake; Graham H Mitchell; A James Mason
Journal:  J Biol Chem       Date:  2012-08-06       Impact factor: 5.157

View more
  3 in total

1.  Further assessments of ligase LplA-mediated modifications of proteins in vitro and in cellulo.

Authors:  Alicia Schirer; Anne Rouch; Estelle Marcheteau; Johann Stojko; Elodie Jeantet; Benjamin Fould; Gilles Ferry; Jean A Boutin
Journal:  Mol Biol Rep       Date:  2021-10-31       Impact factor: 2.316

2.  Biochemistry, structure, and cellular internalization of a four nanobody-bearing Fc dimer.

Authors:  Eric Chabrol; Charline Fagnen; Sophie Landron; Estelle Marcheteau; Johann Stojko; Sophie-Pénélope Guenin; Mathias Antoine; Benjamin Fould; Gilles Ferry; Jean A Boutin; Catherine Vénien-Bryan
Journal:  Protein Sci       Date:  2021-06-17       Impact factor: 6.993

3.  MCH-R1 Antagonist GPS18169, a Pseudopeptide, Is a Peripheral Anti-Obesity Agent in Mice.

Authors:  Jean A Boutin; Magali Jullian; Lukasz Frankiewicz; Mathieu Galibert; Philippe Gloanec; Thierry Le Diguarher; Philippe Dupuis; Amber Ko; Laurent Ripoll; Marc Bertrand; Anne Pecquery; Gilles Ferry; Karine Puget
Journal:  Molecules       Date:  2021-02-27       Impact factor: 4.411

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.