Literature DB >> 27311594

An extraordinary stringent and sensitive light-switchable gene expression system for bacterial cells.

Xianjun Chen1,2,3, Renmei Liu1,2, Zhengcai Ma1, Xiaopei Xu1,2, Haoqian Zhang4, Jianhe Xu1, Qi Ouyang4, Yi Yang1,2,3.   

Abstract

Mesh：

Year:  2016        PMID： 27311594      PMCID： PMC5129885          DOI： 10.1038/cr.2016.74

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  12 in total

1.  Inducible systems see the light.

Authors:  William M Keyes; Alea A Mills
Journal:  Trends Biotechnol       Date:  2003-02       Impact factor: 19.536

2.  Spatiotemporal control of gene expression by a light-switchable transgene system.

Authors:  Xue Wang; Xianjun Chen; Yi Yang
Journal:  Nat Methods       Date:  2012-02-12       Impact factor: 28.547

3.  Multichromatic control of gene expression in Escherichia coli.

Authors:  Jeffrey J Tabor; Anselm Levskaya; Christopher A Voigt
Journal:  J Mol Biol       Date:  2010-10-28       Impact factor: 5.469

4.  Synthetic biology: engineering Escherichia coli to see light.

Authors:  Anselm Levskaya; Aaron A Chevalier; Jeffrey J Tabor; Zachary Booth Simpson; Laura A Lavery; Matthew Levy; Eric A Davidson; Alexander Scouras; Andrew D Ellington; Edward M Marcotte; Christopher A Voigt
Journal:  Nature       Date:  2005-11-24       Impact factor: 49.962

5.  In vivo and in vitro characterization of Escherichia coli protein CheZ gain- and loss-of-function mutants.

Authors:  M G Sanna; M I Simon
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

6.  Refactoring and optimization of light-switchable Escherichia coli two-component systems.

Authors:  Sebastian R Schmidl; Ravi U Sheth; Andrew Wu; Jeffrey J Tabor
Journal:  ACS Synth Biol       Date:  2014-10-11       Impact factor: 5.110

7.  Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals.

Authors:  Evan J Olson; Lucas A Hartsough; Brian P Landry; Raghav Shroff; Jeffrey J Tabor
Journal:  Nat Methods       Date:  2014-03-09       Impact factor: 28.547

8.  Mechanism-based tuning of a LOV domain photoreceptor.

Authors:  Brian D Zoltowski; Brian Vaccaro; Brian R Crane
Journal:  Nat Chem Biol       Date:  2009-08-30       Impact factor: 15.040

9.  Conformational switching in the fungal light sensor Vivid.

Authors:  Brian D Zoltowski; Carsten Schwerdtfeger; Joanne Widom; Jennifer J Loros; Alexandrine M Bilwes; Jay C Dunlap; Brian R Crane
Journal:  Science       Date:  2007-05-18       Impact factor: 47.728

10.  Light activation of the LOV protein vivid generates a rapidly exchanging dimer.

Authors:  Brian D Zoltowski; Brian R Crane
Journal:  Biochemistry       Date:  2008-06-14       Impact factor: 3.162
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  14 in total

Review 1.  Blue-Light Receptors for Optogenetics.

Authors:  Aba Losi; Kevin H Gardner; Andreas Möglich
Journal:  Chem Rev       Date:  2018-07-09       Impact factor: 60.622

2.  Optogenetic control of RNA function and metabolism using engineered light-switchable RNA-binding proteins.

Authors:  Renmei Liu; Jing Yang; Jing Yao; Zhou Zhao; Wei He; Ni Su; Zeyi Zhang; Chenxia Zhang; Zhuo Zhang; Haibo Cai; Linyong Zhu; Yuzheng Zhao; Shu Quan; Xianjun Chen; Yi Yang
Journal:  Nat Biotechnol       Date:  2022-01-03       Impact factor: 68.164

3.  Engineering AraC to make it responsive to light instead of arabinose.

Authors:  Edoardo Romano; Armin Baumschlager; Emir Bora Akmeriç; Navaneethan Palanisamy; Moustafa Houmani; Gregor Schmidt; Mehmet Ali Öztürk; Leonard Ernst; Mustafa Khammash; Barbara Di Ventura
Journal:  Nat Chem Biol       Date:  2021-04-26       Impact factor: 15.040

4.  Optogenetic control of Bacillus subtilis gene expression.

Authors:  Sebastian M Castillo-Hair; Elliot A Baerman; Masaya Fujita; Oleg A Igoshin; Jeffrey J Tabor
Journal:  Nat Commun       Date:  2019-07-15       Impact factor: 14.919

5.  A single-component light sensor system allows highly tunable and direct activation of gene expression in bacterial cells.

Authors:  Xie Li; Changcheng Zhang; Xiaopei Xu; Jun Miao; Jing Yao; Renmei Liu; Yuzheng Zhao; Xianjun Chen; Yi Yang
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

6.  A synthetic BRET-based optogenetic device for pulsatile transgene expression enabling glucose homeostasis in mice.

Authors:  Ting Li; Xianjun Chen; Yajie Qian; Jiawei Shao; Xie Li; Shuning Liu; Linyong Zhu; Yuzheng Zhao; Haifeng Ye; Yi Yang
Journal:  Nat Commun       Date:  2021-01-27       Impact factor: 14.919

7.  Reversible thermal regulation for bifunctional dynamic control of gene expression in Escherichia coli.

Authors:  Xuan Wang; Jia-Ning Han; Xu Zhang; Yue-Yuan Ma; Yina Lin; Huan Wang; Dian-Jie Li; Tao-Ran Zheng; Fu-Qing Wu; Jian-Wen Ye; Guo-Qiang Chen
Journal:  Nat Commun       Date:  2021-03-03       Impact factor: 14.919

8.  Single-component near-infrared optogenetic systems for gene transcription regulation.

Authors:  Andrii A Kaberniuk; Mikhail Baloban; Mikhail V Monakhov; Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Nat Commun       Date:  2021-06-23       Impact factor: 14.919

Review 9.  Optogenetic Modulation of Intracellular Signalling and Transcription: Focus on Neuronal Plasticity.

Authors:  Cyril Eleftheriou; Fabrizia Cesca; Luca Maragliano; Fabio Benfenati; Jose Fernando Maya-Vetencourt
Journal:  J Exp Neurosci       Date:  2017-05-01

Review 10.  Controlling gene expression with light: a multidisciplinary endeavour.

Authors:  Denis Hartmann; Jefferson M Smith; Giacomo Mazzotti; Razia Chowdhry; Michael J Booth
Journal:  Biochem Soc Trans       Date:  2020-08-28       Impact factor: 5.407
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