Literature DB >> 29984995

Blue-Light Receptors for Optogenetics.

Aba Losi1, Kevin H Gardner2,3,4, Andreas Möglich5,6,7.   

Abstract

Sensory photoreceptors underpin light-dependent adaptations of organismal physiology, development, and behavior in nature. Adapted for optogenetics, sensory photoreceptors become genetically encoded actuators and reporters to enable the noninvasive, spatiotemporally accurate and reversible control by light of cellular processes. Rooted in a mechanistic understanding of natural photoreceptors, artificial photoreceptors with customized light-gated function have been engineered that greatly expand the scope of optogenetics beyond the original application of light-controlled ion flow. As we survey presently, UV/blue-light-sensitive photoreceptors have particularly allowed optogenetics to transcend its initial neuroscience applications by unlocking numerous additional cellular processes and parameters for optogenetic intervention, including gene expression, DNA recombination, subcellular localization, cytoskeleton dynamics, intracellular protein stability, signal transduction cascades, apoptosis, and enzyme activity. The engineering of novel photoreceptors benefits from powerful and reusable design strategies, most importantly light-dependent protein association and (un)folding reactions. Additionally, modified versions of these same sensory photoreceptors serve as fluorescent proteins and generators of singlet oxygen, thereby further enriching the optogenetic toolkit. The available and upcoming UV/blue-light-sensitive actuators and reporters enable the detailed and quantitative interrogation of cellular signal networks and processes in increasingly more precise and illuminating manners.

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Year:  2018        PMID: 29984995      PMCID: PMC6500593          DOI: 10.1021/acs.chemrev.8b00163

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  444 in total

1.  Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.

Authors:  Hyotcherl Ihee; Sudarshan Rajagopal; Vukica Srajer; Reinhard Pahl; Spencer Anderson; Marius Schmidt; Friedrich Schotte; Philip A Anfinrud; Michael Wulff; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-03       Impact factor: 11.205

2.  A study of solvent effects on the phosphorescence properties of flavins.

Authors:  G R Brunk; K A Martin; A M Nishimura
Journal:  Biophys J       Date:  1976-12       Impact factor: 4.033

Review 3.  Induction of Signal Transduction by Using Non-Channelrhodopsin-Type Optogenetic Tools.

Authors:  Yoshibumi Ueda; Moritoshi Sato
Journal:  Chembiochem       Date:  2018-05-28       Impact factor: 3.164

4.  Fluorescence correlation spectroscopy of flavins and flavoenzymes: photochemical and photophysical aspects.

Authors:  P A van den Berg; J Widengren; M A Hink; R Rigler; A J Visser
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2001-09-14       Impact factor: 4.098

5.  Mechanism-based tuning of a LOV domain photoreceptor.

Authors:  Brian D Zoltowski; Brian Vaccaro; Brian R Crane
Journal:  Nat Chem Biol       Date:  2009-08-30       Impact factor: 15.040

Review 6.  Redox characteristics of the eukaryotic cytosol.

Authors:  H Reynaldo López-Mirabal; Jakob R Winther
Journal:  Biochim Biophys Acta       Date:  2007-11-07

7.  Highly efficient optogenetic cell ablation in C. elegans using membrane-targeted miniSOG.

Authors:  Suhong Xu; Andrew D Chisholm
Journal:  Sci Rep       Date:  2016-02-10       Impact factor: 4.379

8.  Optical Control of Peroxisomal Trafficking.

Authors:  Jessica I Spiltoir; Devin Strickland; Michael Glotzer; Chandra L Tucker
Journal:  ACS Synth Biol       Date:  2015-11-02       Impact factor: 5.110

9.  Directed evolution of bright mutants of an oxygen-independent flavin-binding fluorescent protein from Pseudomonas putida.

Authors:  Arnab Mukherjee; Kevin B Weyant; Joshua Walker; Charles M Schroeder
Journal:  J Biol Eng       Date:  2012-10-24       Impact factor: 4.355

10.  Optogenetic manipulation of cGMP in cells and animals by the tightly light-regulated guanylyl-cyclase opsin CyclOp.

Authors:  Shiqiang Gao; Jatin Nagpal; Martin W Schneider; Vera Kozjak-Pavlovic; Georg Nagel; Alexander Gottschalk
Journal:  Nat Commun       Date:  2015-09-08       Impact factor: 14.919

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  44 in total

1.  Photoreaction Mechanisms of Flavoprotein Photoreceptors and Their Applications.

Authors:  Tatsuya Iwata; Shinji Masuda
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Light Control of Gene Expression Dynamics.

Authors:  Akihiro Isomura
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

3.  Reverse and Forward Engineering Multicellular Structures with Optogenetics.

Authors:  Thomas R Mumford; Lee Roth; Lukasz J Bugaj
Journal:  Curr Opin Biomed Eng       Date:  2020-10-14

Review 4.  A light life together: photosensing in the plant microbiota.

Authors:  Aba Losi; Wolfgang Gärtner
Journal:  Photochem Photobiol Sci       Date:  2021-03-01       Impact factor: 3.982

Review 5.  Optically inducible membrane recruitment and signaling systems.

Authors:  Pimkhuan Hannanta-Anan; Spencer T Glantz; Brian Y Chow
Journal:  Curr Opin Struct Biol       Date:  2019-03-16       Impact factor: 6.809

6.  Shining light on the alphaproteobacterial general stress response: Comment on: Fiebig et al., Mol Microbiol, 2019.

Authors:  Igor Dikiy; Kevin H Gardner
Journal:  Mol Microbiol       Date:  2019-06-05       Impact factor: 3.501

7.  Unraveling the Mechanism of a LOV Domain Optogenetic Sensor: A Glutamine Lever Induces Unfolding of the Jα Helix.

Authors:  James N Iuliano; Jinnette Tolentino Collado; Agnieszka A Gil; Pavithran T Ravindran; Andras Lukacs; SeungYoun Shin; Helena A Woroniecka; Katrin Adamczyk; James M Aramini; Uthama R Edupuganti; Christopher R Hall; Gregory M Greetham; Igor V Sazanovich; Ian P Clark; Taraneh Daryaee; Jared E Toettcher; Jarrod B French; Kevin H Gardner; Carlos L Simmerling; Stephen R Meech; Peter J Tonge
Journal:  ACS Chem Biol       Date:  2020-09-18       Impact factor: 5.100

8.  A time-dependent role for the transcription factor CREB in neuronal allocation to an engram underlying a fear memory revealed using a novel in vivo optogenetic tool to modulate CREB function.

Authors:  Albert Park; Alexander D Jacob; Brandon J Walters; Sungmo Park; Asim J Rashid; Jung Hoon Jung; Jocelyn Lau; G Andrew Woolley; Paul W Frankland; Sheena A Josselyn
Journal:  Neuropsychopharmacology       Date:  2019-12-14       Impact factor: 7.853

9.  Formation of an unusual glutamine tautomer in a blue light using flavin photocycle characterizes the light-adapted state.

Authors:  Joshua J Goings; Pengfei Li; Qiwen Zhu; Sharon Hammes-Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-09       Impact factor: 11.205

10.  Light Regulation of Enzyme Allostery through Photo-responsive Unnatural Amino Acids.

Authors:  Andrea C Kneuttinger; Kristina Straub; Philipp Bittner; Nadja A Simeth; Astrid Bruckmann; Florian Busch; Chitra Rajendran; Enrico Hupfeld; Vicki H Wysocki; Dominik Horinek; Burkhard König; Rainer Merkl; Reinhard Sterner
Journal:  Cell Chem Biol       Date:  2019-09-05       Impact factor: 8.116

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