Literature DB >> 18553928

Light activation of the LOV protein vivid generates a rapidly exchanging dimer.

Brian D Zoltowski1, Brian R Crane.   

Abstract

The fungal photoreceptor Vivid (VVD) plays an important role in the adaptation of blue-light responses in Neurospora crassa. VVD, an FAD-binding LOV (light, oxygen, voltage) protein, couples light-induced cysteinyl adduct formation at the flavin ring to conformational changes in the N-terminal cap (Ncap) of the VVD PAS domain. Size-exclusion chromatography (SEC), equilibrium ultracentrifugation, and static and dynamic light scattering show that these conformational changes generate a rapidly exchanging VVD dimer, with an expanded hydrodynamic radius. A three-residue N-terminal beta-turn that assumes two different conformations in a crystal structure of a VVD C71V variant is essential for light-state dimerization. Residue substitutions at a critical hinge between the Ncap and PAS core can inhibit or enhance dimerization, whereas a Tyr to Trp substitution at the Ncap-PAS interface stabilizes the light-state dimer. Cross-linking through engineered disulfides indicates that the light-state dimer differs considerably from the dark-state dimer found in VVD crystal structures. These results verify the role of Ncap conformational changes in gating the photic response of N. crassa and indicate that LOV-LOV homo- or heterodimerization may be a mechanism for regulating light-activated gene expression.

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Year:  2008        PMID: 18553928      PMCID: PMC2743001          DOI: 10.1021/bi8007017

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  40 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-28       Impact factor: 11.205

2.  Dimerization of the plant photoreceptor phototropin is probably mediated by the LOV1 domain.

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Journal:  FEBS Lett       Date:  2004-08-13       Impact factor: 4.124

3.  Analysis of heterogeneous interactions.

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Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

4.  Changes at the KinA PAS-A dimerization interface influence histidine kinase function.

Authors:  James Lee; Diana R Tomchick; Chad A Brautigam; Mischa Machius; Remco Kort; Klaas J Hellingwerf; Kevin H Gardner
Journal:  Biochemistry       Date:  2008-03-07       Impact factor: 3.162

Review 5.  In search of higher energy: metabolism-dependent behaviour in bacteria.

Authors:  B L Taylor; I B Zhulin
Journal:  Mol Microbiol       Date:  1998-05       Impact factor: 3.501

Review 6.  The oxygen-responsive NIFL-NIFA complex: a novel two-component regulatory system controlling nitrogenase synthesis in gamma-proteobacteria.

Authors:  R Dixon
Journal:  Arch Microbiol       Date:  1998-05       Impact factor: 2.552

7.  Analysis of protein-protein interaction by simulation of small-zone size exclusion chromatography. Stochastic formulation of kinetic rate contributions to observed high-performance liquid chromatography elution characteristics.

Authors:  F J Stevens
Journal:  Biophys J       Date:  1989-06       Impact factor: 4.033

8.  Structural basis of a phototropin light switch.

Authors:  Shannon M Harper; Lori C Neil; Kevin H Gardner
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

9.  Structural basis for PAS domain heterodimerization in the basic helix--loop--helix-PAS transcription factor hypoxia-inducible factor.

Authors:  Paul J A Erbel; Paul B Card; Ozgur Karakuzu; Richard K Bruick; Kevin H Gardner
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-10       Impact factor: 11.205

10.  A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor.

Authors:  Hirofumi Kurokawa; Dong-Sun Lee; Miki Watanabe; Ikuko Sagami; Bunzo Mikami; C S Raman; Toru Shimizu
Journal:  J Biol Chem       Date:  2004-02-23       Impact factor: 5.157

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  65 in total

1.  Spatiotemporal control of gene expression by a light-switchable transgene system.

Authors:  Xue Wang; Xianjun Chen; Yi Yang
Journal:  Nat Methods       Date:  2012-02-12       Impact factor: 28.547

2.  Kinetics of conformational changes of the FKF1-LOV domain upon photoexcitation.

Authors:  Yusuke Nakasone; Kazunori Zikihara; Satoru Tokutomi; Masahide Terazima
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

3.  Blue light-induced dimerization of a bacterial LOV-HTH DNA-binding protein.

Authors:  Brian D Zoltowski; Laura B Motta-Mena; Kevin H Gardner
Journal:  Biochemistry       Date:  2013-09-12       Impact factor: 3.162

4.  Glutamine Amide Flip Elicits Long Distance Allosteric Responses in the LOV Protein Vivid.

Authors:  Abir Ganguly; Walter Thiel; Brian R Crane
Journal:  J Am Chem Soc       Date:  2017-02-13       Impact factor: 15.419

5.  Time-resolved dimerization of a PAS-LOV protein measured with photocoupled small angle X-ray scattering.

Authors:  Jessica S Lamb; Brian D Zoltowski; Suzette A Pabit; Brian R Crane; Lois Pollack
Journal:  J Am Chem Soc       Date:  2008-08-21       Impact factor: 15.419

6.  Rhythmic conidiation in constant light in vivid mutants of Neurospora crassa.

Authors:  Kevin Schneider; Sabrina Perrino; Kim Oelhafen; Sanshu Li; Artiom Zatsepin; Patricia Lakin-Thomas; Stuart Brody
Journal:  Genetics       Date:  2009-01-12       Impact factor: 4.562

Review 7.  Circadian oscillator proteins across the kingdoms of life: structural aspects.

Authors:  Reena Saini; Mariusz Jaskolski; Seth J Davis
Journal:  BMC Biol       Date:  2019-02-18       Impact factor: 7.431

8.  Analytical ultracentrifugation studies of oligomerization and DNA-binding of TtCarH, a Thermus thermophilus coenzyme B12-based photosensory regulator.

Authors:  Ana I Díez; Juan Manuel Ortiz-Guerrero; Alvaro Ortega; Montserrat Elías-Arnanz; S Padmanabhan; José García de la Torre
Journal:  Eur Biophys J       Date:  2013-03-20       Impact factor: 1.733

9.  Light-induced subunit dissociation by a light-oxygen-voltage domain photoreceptor from Rhodobacter sphaeroides.

Authors:  Karen S Conrad; Alexandrine M Bilwes; Brian R Crane
Journal:  Biochemistry       Date:  2013-01-03       Impact factor: 3.162

10.  Neurospora sees the light: light signaling components in a model system.

Authors:  Chen-Hui Chen; Jennifer J Loros
Journal:  Commun Integr Biol       Date:  2009-09
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