Literature DB >> 2719659

The interplay of electrostatic fields and binding interactions determining catalytic-site reactivity in actinidin. A possible origin of differences in the behaviour of actinidin and papain.

D Kowlessur1, M O'Driscoll, C M Topham, W Templeton, E W Thomas, K Brocklehurst.   

Abstract

1. The pH-dependence of the second-order rate constant (k) for the reaction of actinidin (EC 3.4.22.14) with 2-(N'-acetyl-L-phenylalanylamino)ethyl 2'-pyridyl disulphide was determined and the contributions to k of various hydronic states were evaluated. 2. The data were used to assess the consequences for transition-state geometry of providing P2/S2 hydrophobic contacts in addition to hydrogen-bonding opportunities in the S1-S2 intersubsite region. 3. The P2/S2 contacts (a) substantially improve enzyme-ligand binding, (b) greatly enhance the contribution to reactivity of the hydronic state bounded by pKa 3 (the pKa characteristic of the formation of catalytic-site-S-/-ImH+ state) and pKa 5 (a relatively minor contributor in reactions that lack the P2/S2 contacts), such that the major rate optimum occurs at pH 4 instead of at pH 2.8-2.9, and (c) reveal the kinetic influence of a pKa approx. 6.3 not hitherto observed in reactions of actinidin. 4. Possibilities for the interplay of electrostatic effects and binding interactions in both actinidin and papain (EC 3.4.22.2) are discussed.

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Year:  1989        PMID: 2719659      PMCID: PMC1138529          DOI: 10.1042/bj2590443

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  36 in total

1.  A novel reactivity of papain and a convenient active site titration in the presence of other thiols.

Authors:  K Brocklehurst; G Little
Journal:  FEBS Lett       Date:  1970-07-29       Impact factor: 4.124

2.  Appendix: Analysis of pH-dependent kinetics in up to four reactive hydronic states.

Authors:  S M Brocklehurst; K Brocklehurst
Journal:  Biochem J       Date:  1988-12-01       Impact factor: 3.857

3.  Structural and electrostatic differences between actinidin and papain account for differences in activity.

Authors:  R W Pickersgill; I G Sumner; M E Collins; P W Goodenough
Journal:  Biochem J       Date:  1989-01-01       Impact factor: 3.857

4.  Crystallographic studies of the activity of hen egg-white lysozyme.

Authors:  C C Blake; L N Johnson; G A Mair; A C North; D C Phillips; V R Sarma
Journal:  Proc R Soc Lond B Biol Sci       Date:  1967-04-18

5.  Benzoylamidoacetonitrile as an inhibitor of papain.

Authors:  L A Sluyterman; J Wijdenes
Journal:  Biochim Biophys Acta       Date:  1973-03-15

6.  A nuclear magnetic resonance study of enzyme-inhibitor association. The use of pH and temperature effects to probe the binding environments.

Authors:  F W Dahlquist; M A Raftery
Journal:  Biochemistry       Date:  1968-09       Impact factor: 3.162

7.  Supracrystallographic resolution of interactions contributing to enzyme catalysis by use of natural structural variants and reactivity-probe kinetics.

Authors:  K Brocklehurst; S M Brocklehurst; D Kowlessur; M O'Driscoll; G Patel; E Salih; W Templeton; E Thomas; C M Topham; F Willenbrock
Journal:  Biochem J       Date:  1988-12-01       Impact factor: 3.857

8.  The amino acid sequence of the tryptic peptides from actinidin, a proteolytic enzyme from the fruit of Actinidia chinensis.

Authors:  A Carne; C H Moore
Journal:  Biochem J       Date:  1978-07-01       Impact factor: 3.857

9.  Consequences of molecular recognition in the S1-S2 intersubsite region of papain for catalytic-site chemistry. Change in pH-dependence characteristics and generation of an inverse solvent kinetic isotope effect by introduction of a P1-P2 amide bond into a two-protonic-state reactivity probe.

Authors:  K Brocklehurst; D Kowlessur; G Patel; W Templeton; K Quigley; E W Thomas; C W Wharton; F Willenbrock; R J Szawelski
Journal:  Biochem J       Date:  1988-03-15       Impact factor: 3.857

10.  Differences in the interaction of the catalytic groups of the active centres of actinidin and papain. Rapid purification of fully active actinidin by covalent chromatography and characterization of its active centre by use of two-protonic-state reactivity probes.

Authors:  K Brocklehurst; B S Baines; J P Malthouse
Journal:  Biochem J       Date:  1981-09-01       Impact factor: 3.857

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  7 in total

1.  Evaluation of hydrogen-bonding and enantiomeric P2-S2 hydrophobic contacts in dynamic aspects of molecular recognition by papain.

Authors:  M Patel; I S Kayani; W Templeton; G W Mellor; E W Thomas; K Brocklehurst
Journal:  Biochem J       Date:  1992-11-01       Impact factor: 3.857

2.  Variation in aspects of cysteine proteinase catalytic mechanism deduced by spectroscopic observation of dithioester intermediates, kinetic analysis and molecular dynamics simulations.

Authors:  J D Reid; S Hussain; S K Sreedharan; T S Bailey; S Pinitglang; E W Thomas; C S Verma; K Brocklehurst
Journal:  Biochem J       Date:  2001-07-15       Impact factor: 3.857

3.  Variation in the P2-S2 stereochemical selectivity towards the enantiomeric N-acetylphenylalanylglycine 4-nitroanilides among the cysteine proteinases papain, ficin and actinidin.

Authors:  M Patel; I S Kayani; G W Mellor; S Sreedharan; W Templeton; E W Thomas; M Thomas; K Brocklehurst
Journal:  Biochem J       Date:  1992-01-15       Impact factor: 3.857

4.  Variation in the pH-dependent pre-steady-state and steady-state kinetic characteristics of cysteine-proteinase mechanism: evidence for electrostatic modulation of catalytic-site function by the neighbouring carboxylate anion.

Authors:  Syeed Hussain; Surapong Pinitglang; Tamara S F Bailey; James D Reid; Michael A Noble; Marina Resmini; Emrys W Thomas; Richard B Greaves; Chandra S Verma; Keith Brocklehurst
Journal:  Biochem J       Date:  2003-06-15       Impact factor: 3.857

5.  Catalytic-site characteristics of the porcine calpain II 80 kDa/18 kDa heterodimer revealed by selective reaction of its essential thiol group with two-hydronic-state time-dependent inhibitors: evidence for a catalytic site Cys/His interactive system and an ionizing modulatory group.

Authors:  G W Mellor; S K Sreedharan; D Kowlessur; E W Thomas; K Brocklehurst
Journal:  Biochem J       Date:  1993-02-15       Impact factor: 3.857

6.  A re-appraisal of the structural basis of stereochemical recognition in papain. Insensitivity of binding-site-catalytic-site signalling to P2-chirality in a time-dependent inhibition.

Authors:  W Templeton; D Kowlessur; E W Thomas; C M Topham; K Brocklehurst
Journal:  Biochem J       Date:  1990-03-15       Impact factor: 3.857

7.  Structure-function relationships in the cysteine proteinases actinidin, papain and papaya proteinase omega. Three-dimensional structure of papaya proteinase omega deduced by knowledge-based modelling and active-centre characteristics determined by two-hydronic-state reactivity probe kinetics and kinetics of catalysis.

Authors:  C M Topham; E Salih; C Frazao; D Kowlessur; J P Overington; M Thomas; S M Brocklehurst; M Patel; E W Thomas; K Brocklehurst
Journal:  Biochem J       Date:  1991-11-15       Impact factor: 3.857

  7 in total

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