Literature DB >> 27105110

An Epigenetic Clock Measures Accelerated Aging in Treated HIV Infection.

Konstantinos Boulias1, Judy Lieberman2, Eric Lieberman Greer3.   

Abstract

In this issue of Molecular Cell, Gross et al. (2016) find a CpG DNA methylation signature in blood cells of patients with chronic well-controlled HIV infection that correlates with accelerated aging.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID： 27105110      PMCID： PMC5315270          DOI： 10.1016/j.molcel.2016.04.008

Source DB:  PubMed          Journal:  Mol Cell        ISSN： 1097-2765            Impact factor:   17.970


  11 in total

Review 1.  Epigenetic regulation of ageing: linking environmental inputs to genomic stability.

Authors:  Bérénice A Benayoun; Elizabeth A Pollina; Anne Brunet
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-16       Impact factor: 94.444

Review 2.  HIV infection, inflammation, immunosenescence, and aging.

Authors:  Steven G Deeks
Journal:  Annu Rev Med       Date:  2011       Impact factor: 13.739

3.  Methylome-wide Analysis of Chronic HIV Infection Reveals Five-Year Increase in Biological Age and Epigenetic Targeting of HLA.

Authors:  Andrew M Gross; Philipp A Jaeger; Jason F Kreisberg; Katherine Licon; Kristen L Jepsen; Mahdieh Khosroheidari; Brenda M Morsey; Susan Swindells; Hui Shen; Cherie T Ng; Ken Flagg; Daniel Chen; Kang Zhang; Howard S Fox; Trey Ideker
Journal:  Mol Cell       Date:  2016-04-21       Impact factor: 17.970

Review 4.  A metabolic and functional overview of brain aging linked to neurological disorders.

Authors:  Najma Z Baquer; Asia Taha; Pardeep Kumar; P McLean; S M Cowsik; R K Kale; R Singh; Deepak Sharma
Journal:  Biogerontology       Date:  2009-04-21       Impact factor: 4.277

5.  Genome-wide methylation profiles reveal quantitative views of human aging rates.

Authors:  Gregory Hannum; Justin Guinney; Ling Zhao; Li Zhang; Guy Hughes; SriniVas Sadda; Brandy Klotzle; Marina Bibikova; Jian-Bing Fan; Yuan Gao; Rob Deconde; Menzies Chen; Indika Rajapakse; Stephen Friend; Trey Ideker; Kang Zhang
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

6.  Accelerated epigenetic aging in Down syndrome.

Authors:  Steve Horvath; Paolo Garagnani; Maria Giulia Bacalini; Chiara Pirazzini; Stefano Salvioli; Davide Gentilini; Anna Maria Di Blasio; Cristina Giuliani; Spencer Tung; Harry V Vinters; Claudio Franceschi
Journal:  Aging Cell       Date:  2015-02-09       Impact factor: 9.304

7.  Acceleration of age-associated methylation patterns in HIV-1-infected adults.

Authors:  Tammy M Rickabaugh; Ruth M Baxter; Mary Sehl; Janet S Sinsheimer; Patricia M Hultin; Lance E Hultin; Austin Quach; Otoniel Martínez-Maza; Steve Horvath; Eric Vilain; Beth D Jamieson
Journal:  PLoS One       Date:  2015-03-25       Impact factor: 3.240

8.  HIV-1 Infection Accelerates Age According to the Epigenetic Clock.

Authors:  Steve Horvath; Andrew J Levine
Journal:  J Infect Dis       Date:  2015-05-12       Impact factor: 5.226

9.  A whole-genome association study of major determinants for host control of HIV-1.

Authors:  Jacques Fellay; Kevin V Shianna; Dongliang Ge; Sara Colombo; Bruno Ledergerber; Mike Weale; Kunlin Zhang; Curtis Gumbs; Antonella Castagna; Andrea Cossarizza; Alessandro Cozzi-Lepri; Andrea De Luca; Philippa Easterbrook; Patrick Francioli; Simon Mallal; Javier Martinez-Picado; José M Miro; Niels Obel; Jason P Smith; Josiane Wyniger; Patrick Descombes; Stylianos E Antonarakis; Norman L Letvin; Andrew J McMichael; Barton F Haynes; Amalio Telenti; David B Goldstein
Journal:  Science       Date:  2007-07-19       Impact factor: 47.728

10.  DNA methylation age of human tissues and cell types.

Authors:  Steve Horvath
Journal:  Genome Biol       Date:  2013       Impact factor: 13.583
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  11 in total

1.  Mitochondrial biogenesis is altered in HIV+ brains exposed to ART: Implications for therapeutic targeting of astroglia.

Authors:  Mary K Swinton; Aliyah Carson; Francesca Telese; Ana B Sanchez; Benchawanna Soontornniyomkij; Leila Rad; Isabella Batki; Brandi Quintanilla; Josué Pérez-Santiago; Cristian L Achim; Scott Letendre; Ronald J Ellis; Igor Grant; Anne N Murphy; Jerel Adam Fields
Journal:  Neurobiol Dis       Date:  2019-06-22       Impact factor: 5.996

2.  Accelerated and accentuated neurocognitive aging in HIV infection.

Authors:  David P Sheppard; Jennifer E Iudicello; Erin E Morgan; Rujvi Kamat; Lindsay R Clark; Gunes Avci; Mark W Bondi; Steven Paul Woods
Journal:  J Neurovirol       Date:  2017-03-20       Impact factor: 2.643

3.  Longitudinal Study of DNA Methylation and Epigenetic Clocks Prior to and Following Test-Confirmed COVID-19 and mRNA Vaccination.

Authors:  Alina P S Pang; Albert T Higgins-Chen; Florence Comite; Ioana Raica; Christopher Arboleda; Hannah Went; Tavis Mendez; Michael Schotsaert; Varun Dwaraka; Ryan Smith; Morgan E Levine; Lishomwa C Ndhlovu; Michael J Corley
Journal:  Front Genet       Date:  2022-06-03       Impact factor: 4.772

4.  A new monocyte epigenetic clock reveals nonlinear effects of alcohol consumption on biological aging in three independent cohorts (N = 2242).

Authors:  Xiaoyu Liang; Rajita Sinha; Amy C Justice; Mardge H Cohen; Bradley E Aouizerat; Ke Xu
Journal:  Alcohol Clin Exp Res       Date:  2022-03-17       Impact factor: 3.928

5.  Perinatally acquired HIV infection accelerates epigenetic aging in South African adolescents.

Authors:  Steve Horvath; Dan J Stein; Nicole Phillips; Sarah J Heany; Michael S Kobor; David T S Lin; Landon Myer; Heather J Zar; Andrew J Levine; Jacqueline Hoare
Journal:  AIDS       Date:  2018-07-17       Impact factor: 4.177

6.  Changes in epigenetic profiles throughout early childhood and their relationship to the response to pneumococcal vaccination.

Authors:  Sara Pischedda; Daniel O'Connor; Benjamin P Fairfax; Antonio Salas; Federico Martinon-Torres; Andrew J Pollard; Johannes Trück
Journal:  Clin Epigenetics       Date:  2021-02-04       Impact factor: 6.551

7.  Genome-wide DNA methylation profiling of peripheral blood reveals an epigenetic signature associated with severe COVID-19.

Authors:  Michael J Corley; Alina P S Pang; Kush Dody; Philip A Mudd; Bruce K Patterson; Harish Seethamraju; Yaron Bram; Michael J Peluso; Leonel Torres; Nikita S Iyer; Thomas A Premeaux; Stephen T Yeung; Vasuretha Chandar; Alain Borczuk; Robert E Schwartz; Timothy J Henrich; Steven G Deeks; Jonah B Sacha; Lishomwa C Ndhlovu
Journal:  J Leukoc Biol       Date:  2021-01-19       Impact factor: 6.011

8.  Depressive symptoms, physical symptoms, and health-related quality of life among older adults with HIV.

Authors:  Blair Olson; Wilson Vincent; Jaimie P Meyer; Trace Kershaw; Kathleen J Sikkema; Timothy G Heckman; Nathan B Hansen
Journal:  Qual Life Res       Date:  2019-08-24       Impact factor: 4.147

9.  Aging and rejuvenation - a modular epigenome model.

Authors:  Priscila Chiavellini; Martina Canatelli-Mallat; Marianne Lehmann; Maria D Gallardo; Claudia B Herenu; Jose L Cordeiro; James Clement; Rodolfo G Goya
Journal:  Aging (Albany NY)       Date:  2021-02-24       Impact factor: 5.682

10.  Abrupt and altered cell-type specific DNA methylation profiles in blood during acute HIV infection persists despite prompt initiation of ART.

Authors:  Michael J Corley; Carlo Sacdalan; Alina P S Pang; Nitiya Chomchey; Nisakorn Ratnaratorn; Victor Valcour; Eugene Kroon; Kyu S Cho; Andrew C Belden; Donn Colby; Merlin Robb; Denise Hsu; Serena Spudich; Robert Paul; Sandhya Vasan; Lishomwa C Ndhlovu
Journal:  PLoS Pathog       Date:  2021-08-13       Impact factor: 6.823
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